RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 SLC19A1P41440 591 aa11.5□□□□□ -0.57
COPS2-204ENST00000558545 PRDM9Q9NQV7 894 aa11.5□□□□□ -0.57
COPS2-204ENST00000558545 PCDHGC3Q9UN70 934 aa11.5□□□□□ -0.57
COPS2-204ENST00000558545 MOXD2PA6NHM9 499 aa11.49□□□□□ -0.57
COPS2-204ENST00000558545 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
COPS2-204ENST00000558545 RETREG3Q86VR2 466 aa11.48□□□□□ -0.57
COPS2-204ENST00000558545 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
COPS2-204ENST00000558545 NDUFV2P19404 249 aa11.47□□□□□ -0.57
COPS2-204ENST00000558545 LIAT1Q6ZQX7 453 aa11.47□□□□□ -0.57
COPS2-204ENST00000558545 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
COPS2-204ENST00000558545 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
COPS2-204ENST00000558545 RSBN1LQ6PCB5 846 aaPredicted RBP11.46□□□□□ -0.57
COPS2-204ENST00000558545 SPTLC1O15269 473 aa11.45□□□□□ -0.58
COPS2-204ENST00000558545 RPIAP49247 311 aa11.45□□□□□ -0.58
COPS2-204ENST00000558545 LAPTM4AQ15012 233 aa11.44□□□□□ -0.58
COPS2-204ENST00000558545 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
COPS2-204ENST00000558545 JUNDP17535 347 aa11.43□□□□□ -0.58
COPS2-204ENST00000558545 ZNF598Q86UK7 904 aaKnown RBP11.43□□□□□ -0.58
COPS2-204ENST00000558545 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
COPS2-204ENST00000558545 C6orf229H3BNL8 230 aa11.42□□□□□ -0.58
COPS2-204ENST00000558545 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
COPS2-204ENST00000558545 MTMR2Q13614 643 aa11.41□□□□□ -0.58
COPS2-204ENST00000558545 MYSM1Q5VVJ2 828 aa11.41□□□□□ -0.58
COPS2-204ENST00000558545 KDM4CQ9H3R0 1056 aa11.41□□□□□ -0.58
COPS2-204ENST00000558545 RIC3Q7Z5B4 369 aa11.4□□□□□ -0.58
COPS2-204ENST00000558545 GPBP1L1Q9HC44 474 aaPredicted RBP11.4□□□□□ -0.58
COPS2-204ENST00000558545 PRPF38BQ5VTL8 546 aaKnown RBP11.39□□□□□ -0.59
COPS2-204ENST00000558545 NRG2O14511 850 aaPredicted RBP11.38□□□□□ -0.59
COPS2-204ENST00000558545 ZNF697Q5TEC3 545 aa11.38□□□□□ -0.59
COPS2-204ENST00000558545 DESI1Q6ICB0 168 aa11.38□□□□□ -0.59
COPS2-204ENST00000558545 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
COPS2-204ENST00000558545 GFRA3O60609 400 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PRR20EP86478 221 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PRR20CP86479 221 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PRR20DP86480 221 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PRR20BP86481 221 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PRR20AP86496 221 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 DDRGK1Q96HY6 314 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
COPS2-204ENST00000558545 ZBTB3Q9H5J0 574 aa11.36□□□□□ -0.59
COPS2-204ENST00000558545 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
COPS2-204ENST00000558545 CD2BP2O95400 341 aaKnown RBP11.35□□□□□ -0.59
COPS2-204ENST00000558545 HRCP23327 699 aa11.35□□□□□ -0.59
COPS2-204ENST00000558545 PRR7Q8TB68 274 aa11.35□□□□□ -0.59
COPS2-204ENST00000558545 LIMD1Q9UGP4 676 aa11.35□□□□□ -0.59
COPS2-204ENST00000558545 ZBTB24O43167 697 aaPredicted RBP11.34□□□□□ -0.59
COPS2-204ENST00000558545 PTPRNQ16849 979 aa11.34□□□□□ -0.59
COPS2-204ENST00000558545 GDF9O60383 454 aa11.33□□□□□ -0.6
COPS2-204ENST00000558545 FAM117AQ9C073 453 aa11.33□□□□□ -0.6
COPS2-204ENST00000558545 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
COPS2-204ENST00000558545 TPRNQ4KMQ1 711 aa11.32□□□□□ -0.6
COPS2-204ENST00000558545 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
COPS2-204ENST00000558545 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
COPS2-204ENST00000558545 LILRB3O75022 631 aa11.31□□□□□ -0.6
COPS2-204ENST00000558545 TRIM32Q13049 653 aa11.31□□□□□ -0.6
COPS2-204ENST00000558545 SH3D19Q5HYK7 790 aa11.31□□□□□ -0.6
COPS2-204ENST00000558545 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
COPS2-204ENST00000558545 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
COPS2-204ENST00000558545 QPCTQ16769 361 aa11.3□□□□□ -0.6
COPS2-204ENST00000558545 CCDC24Q8N4L8 307 aa11.3□□□□□ -0.6
COPS2-204ENST00000558545 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
COPS2-204ENST00000558545 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
COPS2-204ENST00000558545 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
COPS2-204ENST00000558545 EVA1BQ9NVM1 165 aa11.28□□□□□ -0.6
COPS2-204ENST00000558545 CSPP1Q1MSJ5 1256 aa11.27□□□□□ -0.61
COPS2-204ENST00000558545 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
COPS2-204ENST00000558545 Q6ZNB5 142 aa11.27□□□□□ -0.61
COPS2-204ENST00000558545 WNT7BP56706 349 aa11.26□□□□□ -0.61
COPS2-204ENST00000558545 POLR3EQ9NVU0 708 aa11.26□□□□□ -0.61
COPS2-204ENST00000558545 NEUROD2Q15784 382 aa11.25□□□□□ -0.61
COPS2-204ENST00000558545 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
COPS2-204ENST00000558545 NUTM2BA6NNL0 878 aaPredicted RBP11.24□□□□□ -0.61
COPS2-204ENST00000558545 NUTM2EB1AL46 878 aaPredicted RBP11.24□□□□□ -0.61
COPS2-204ENST00000558545 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
COPS2-204ENST00000558545 WNT7AO00755 349 aa11.24□□□□□ -0.61
COPS2-204ENST00000558545 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
COPS2-204ENST00000558545 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
COPS2-204ENST00000558545 NUTM2DQ5VT03 806 aaPredicted RBP11.24□□□□□ -0.61
COPS2-204ENST00000558545 NUTM2AQ8IVF1 878 aaPredicted RBP11.24□□□□□ -0.61
COPS2-204ENST00000558545 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
COPS2-204ENST00000558545 FOXC1Q12948 553 aa11.23□□□□□ -0.61
COPS2-204ENST00000558545 GOPCQ9HD26 462 aa11.23□□□□□ -0.61
COPS2-204ENST00000558545 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
COPS2-204ENST00000558545 LCE2BO14633 110 aa11.21□□□□□ -0.61
COPS2-204ENST00000558545 DGAT1O75907 488 aa11.21□□□□□ -0.61
COPS2-204ENST00000558545 F12P00748 615 aaPredicted RBP11.21□□□□□ -0.61
COPS2-204ENST00000558545 SKOR1P84550 965 aa11.21□□□□□ -0.61
COPS2-204ENST00000558545 UNC93B1Q9H1C4 597 aa11.21□□□□□ -0.61
COPS2-204ENST00000558545 TOR4AQ9NXH8 423 aa11.21□□□□□ -0.61
COPS2-204ENST00000558545 PPP2R2DQ66LE6 453 aa11.2□□□□□ -0.62
COPS2-204ENST00000558545 TRAF7Q6Q0C0 670 aa11.19□□□□□ -0.62
COPS2-204ENST00000558545 PROCA1Q8NCQ7 364 aaPredicted RBP11.19□□□□□ -0.62
COPS2-204ENST00000558545 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
COPS2-204ENST00000558545 PER1O15534 1290 aaPredicted RBP11.17□□□□□ -0.62
COPS2-204ENST00000558545 PKDCCQ504Y2 493 aa11.17□□□□□ -0.62
COPS2-204ENST00000558545 RC3H1Q5TC82 1133 aaKnown RBP11.17□□□□□ -0.62
COPS2-204ENST00000558545 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
COPS2-204ENST00000558545 MRGPRX2Q96LB1 330 aa11.17□□□□□ -0.62
COPS2-204ENST00000558545 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms