RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 MTRQ99707 1265 aa10.71□□□□□ -0.69
ZEB1-211ENST00000558440 DIP2BQ9P265 1576 aa10.71□□□□□ -0.69
ZEB1-211ENST00000558440 ADCY10Q96PN6 1610 aa10.7□□□□□ -0.7
ZEB1-211ENST00000558440 KDM6BO15054 1643 aa10.69□□□□□ -0.7
ZEB1-211ENST00000558440 METTL3Q86U44 580 aaKnown RBP10.69□□□□□ -0.7
ZEB1-211ENST00000558440 IL21Q9HBE4 155 aa10.69□□□□□ -0.7
ZEB1-211ENST00000558440 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
ZEB1-211ENST00000558440 PRR14Q9BWN1 585 aa10.67□□□□□ -0.7
ZEB1-211ENST00000558440 CUL7Q14999 1698 aa10.66□□□□□ -0.7
ZEB1-211ENST00000558440 ZNF516Q92618 1163 aa10.63□□□□□ -0.71
ZEB1-211ENST00000558440 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
ZEB1-211ENST00000558440 SLC10A3P09131 477 aa10.62□□□□□ -0.71
ZEB1-211ENST00000558440 COPS2P61201 443 aa10.62□□□□□ -0.71
ZEB1-211ENST00000558440 CFHP08603 1231 aa10.61□□□□□ -0.71
ZEB1-211ENST00000558440 KMT5BQ4FZB7 885 aa10.61□□□□□ -0.71
ZEB1-211ENST00000558440 PCDHB3Q9Y5E6 796 aa10.61□□□□□ -0.71
ZEB1-211ENST00000558440 ACTN4O43707 911 aaKnown RBP10.6□□□□□ -0.71
ZEB1-211ENST00000558440 LAPTM4AQ15012 233 aa10.59□□□□□ -0.71
ZEB1-211ENST00000558440 KIF27Q86VH2 1401 aa10.58□□□□□ -0.72
ZEB1-211ENST00000558440 PHOX2BQ99453 314 aa10.58□□□□□ -0.72
ZEB1-211ENST00000558440 DAXXQ9UER7 740 aaPredicted RBP10.58□□□□□ -0.72
ZEB1-211ENST00000558440 PTPRGP23470 1445 aa10.58□□□□□ -0.72
ZEB1-211ENST00000558440 ZPR1O75312 459 aa10.57□□□□□ -0.72
ZEB1-211ENST00000558440 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
ZEB1-211ENST00000558440 BLOC1S3Q6QNY0 202 aa10.57□□□□□ -0.72
ZEB1-211ENST00000558440 NKX2-3Q8TAU0 364 aa10.57□□□□□ -0.72
ZEB1-211ENST00000558440 TTBK1Q5TCY1 1321 aaPredicted RBP10.57□□□□□ -0.72
ZEB1-211ENST00000558440 PPRC1Q5VV67 1664 aaKnown RBP10.57□□□□□ -0.72
ZEB1-211ENST00000558440 IGF1RP08069 1367 aa10.56□□□□□ -0.72
ZEB1-211ENST00000558440 RSPH4AQ5TD94 716 aa10.56□□□□□ -0.72
ZEB1-211ENST00000558440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
ZEB1-211ENST00000558440 NLRP7Q8WX94 980 aa10.56□□□□□ -0.72
ZEB1-211ENST00000558440 CARMIL2Q6F5E8 1435 aa10.56□□□□□ -0.72
ZEB1-211ENST00000558440 ABCC2Q92887 1545 aa10.55□□□□□ -0.72
ZEB1-211ENST00000558440 PPP1R18Q6NYC8 613 aa10.55□□□□□ -0.72
ZEB1-211ENST00000558440 TNIKQ9UKE5 1360 aa10.54□□□□□ -0.72
ZEB1-211ENST00000558440 GFRA3O60609 400 aa10.54□□□□□ -0.72
ZEB1-211ENST00000558440 GLI2P10070 1586 aa10.54□□□□□ -0.72
ZEB1-211ENST00000558440 IQGAP2Q13576 1575 aa10.54□□□□□ -0.72
ZEB1-211ENST00000558440 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
ZEB1-211ENST00000558440 ASXL2Q76L83 1435 aa10.53□□□□□ -0.72
ZEB1-211ENST00000558440 TRAF7Q6Q0C0 670 aa10.53□□□□□ -0.72
ZEB1-211ENST00000558440 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.53□□□□□ -0.72
ZEB1-211ENST00000558440 RDH13Q8NBN7 331 aa10.52□□□□□ -0.73
ZEB1-211ENST00000558440 CARMIL1Q5VZK9 1371 aa10.52□□□□□ -0.73
ZEB1-211ENST00000558440 ADGRL1O94910 1474 aa10.51□□□□□ -0.73
ZEB1-211ENST00000558440 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
ZEB1-211ENST00000558440 IRF6O14896 467 aa10.51□□□□□ -0.73
ZEB1-211ENST00000558440 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
ZEB1-211ENST00000558440 MINK1Q8N4C8 1332 aaPredicted RBP10.51□□□□□ -0.73
ZEB1-211ENST00000558440 UHRF1BP1LA0JNW5 1464 aa10.5□□□□□ -0.73
ZEB1-211ENST00000558440 TLL1O43897 1013 aa10.5□□□□□ -0.73
ZEB1-211ENST00000558440 GGCXP38435 758 aa10.5□□□□□ -0.73
ZEB1-211ENST00000558440 LMOD2Q6P5Q4 547 aa10.5□□□□□ -0.73
ZEB1-211ENST00000558440 MAP3K4Q9Y6R4 1608 aa10.5□□□□□ -0.73
ZEB1-211ENST00000558440 NR1I2O75469 434 aa10.49□□□□□ -0.73
ZEB1-211ENST00000558440 UACAQ9BZF9 1416 aa10.49□□□□□ -0.73
ZEB1-211ENST00000558440 ZCCHC11Q5TAX3 1644 aaKnown RBP10.48□□□□□ -0.73
ZEB1-211ENST00000558440 LCE2BO14633 110 aa10.48□□□□□ -0.73
ZEB1-211ENST00000558440 TMUB1Q9BVT8 246 aa10.48□□□□□ -0.73
ZEB1-211ENST00000558440 TEX14Q8IWB6 1497 aa10.48□□□□□ -0.73
ZEB1-211ENST00000558440 CCDC102AQ96A19 550 aa10.47□□□□□ -0.73
ZEB1-211ENST00000558440 EPRSP07814 1512 aaKnown RBP10.47□□□□□ -0.73
ZEB1-211ENST00000558440 GCGRP47871 477 aa10.46□□□□□ -0.73
ZEB1-211ENST00000558440 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
ZEB1-211ENST00000558440 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
ZEB1-211ENST00000558440 DISP1Q96F81 1524 aa10.46□□□□□ -0.74
ZEB1-211ENST00000558440 KDM5BQ9UGL1 1544 aa10.45□□□□□ -0.74
ZEB1-211ENST00000558440 KIAA0556O60303 1618 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 HECW2Q9P2P5 1572 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 ADH1BP00325 375 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 FUT2Q10981 343 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 SCUBE3Q8IX30 993 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 V9GY48 417 aaPredicted RBP10.44□□□□□ -0.74
ZEB1-211ENST00000558440 CTTNBP2Q8WZ74 1663 aa10.44□□□□□ -0.74
ZEB1-211ENST00000558440 UGGT2Q9NYU1 1516 aa10.43□□□□□ -0.74
ZEB1-211ENST00000558440 COL17A1Q9UMD9 1497 aaPredicted RBP10.43□□□□□ -0.74
ZEB1-211ENST00000558440 MORN1Q5T089 497 aa10.43□□□□□ -0.74
ZEB1-211ENST00000558440 CFAP43Q8NDM7 1665 aa10.42□□□□□ -0.74
ZEB1-211ENST00000558440 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
ZEB1-211ENST00000558440 NRG2O14511 850 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-211ENST00000558440 CD46P15529 392 aa10.42□□□□□ -0.74
ZEB1-211ENST00000558440 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
ZEB1-211ENST00000558440 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
ZEB1-211ENST00000558440 RAPGEF2Q9Y4G8 1499 aa10.42□□□□□ -0.74
ZEB1-211ENST00000558440 S1PR4O95977 384 aa10.41□□□□□ -0.74
ZEB1-211ENST00000558440 WDR7Q9Y4E6 1490 aa10.41□□□□□ -0.74
ZEB1-211ENST00000558440 BARGINQ6ZT62 677 aa10.4□□□□□ -0.74
ZEB1-211ENST00000558440 ZMYND10O75800 440 aa10.39□□□□□ -0.75
ZEB1-211ENST00000558440 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
ZEB1-211ENST00000558440 CLCN1P35523 988 aa10.38□□□□□ -0.75
ZEB1-211ENST00000558440 ANKLE1Q8NAG6 615 aa10.38□□□□□ -0.75
ZEB1-211ENST00000558440 SPSB2Q99619 263 aa10.38□□□□□ -0.75
ZEB1-211ENST00000558440 SLC6A16Q9GZN6 736 aa10.38□□□□□ -0.75
ZEB1-211ENST00000558440 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
ZEB1-211ENST00000558440 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
ZEB1-211ENST00000558440 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
ZEB1-211ENST00000558440 SLC27A5Q9Y2P5 690 aa10.37□□□□□ -0.75
ZEB1-211ENST00000558440 KIF21BO75037 1637 aa10.36□□□□□ -0.75
ZEB1-211ENST00000558440 CD109Q6YHK3 1445 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms