RNA–Protein interactions for RNA: ENST00000558385.1

LINC00593-201, long intergenic non-protein coding RNA 593, humanhuman

TSL 3

Gene LINC00593, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-201ENST00000558385 ST20-MTHFSA0A0A6YYL1 179 aa16.93■□□□□ 0.3
LINC00593-201ENST00000558385 SCAF1Q9H7N4 1312 aaKnown RBP16.93■□□□□ 0.3
LINC00593-201ENST00000558385 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
LINC00593-201ENST00000558385 NKTRP30414 1462 aaKnown RBP16.93■□□□□ 0.3
LINC00593-201ENST00000558385 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
LINC00593-201ENST00000558385 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
LINC00593-201ENST00000558385 POGKQ9P215 609 aa16.92■□□□□ 0.3
LINC00593-201ENST00000558385 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
LINC00593-201ENST00000558385 PRAM1Q96QH2 718 aa16.91■□□□□ 0.3
LINC00593-201ENST00000558385 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
LINC00593-201ENST00000558385 TESK2Q96S53 571 aa16.9■□□□□ 0.3
LINC00593-201ENST00000558385 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
LINC00593-201ENST00000558385 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.29
LINC00593-201ENST00000558385 TOM1O60784 492 aa16.88■□□□□ 0.29
LINC00593-201ENST00000558385 PROSER2Q86WR7 435 aaPredicted RBP16.88■□□□□ 0.29
LINC00593-201ENST00000558385 CCER2I3L3R5 266 aa16.87■□□□□ 0.29
LINC00593-201ENST00000558385 DDX10Q13206 875 aaKnown RBP16.87■□□□□ 0.29
LINC00593-201ENST00000558385 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
LINC00593-201ENST00000558385 PLEKHH1Q9ULM0 1364 aa16.86■□□□□ 0.29
LINC00593-201ENST00000558385 QRICH2Q9H0J4 1663 aa16.85■□□□□ 0.29
LINC00593-201ENST00000558385 TMF1P82094 1093 aa16.84■□□□□ 0.29
LINC00593-201ENST00000558385 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
LINC00593-201ENST00000558385 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.28
LINC00593-201ENST00000558385 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
LINC00593-201ENST00000558385 EVC2Q86UK5 1308 aa16.82■□□□□ 0.28
LINC00593-201ENST00000558385 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
LINC00593-201ENST00000558385 HIRIP3Q9BW71 556 aaPredicted RBP16.82■□□□□ 0.28
LINC00593-201ENST00000558385 ADGRB2O60241 1585 aa16.81■□□□□ 0.28
LINC00593-201ENST00000558385 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
LINC00593-201ENST00000558385 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
LINC00593-201ENST00000558385 ANP32CO43423 234 aa16.81■□□□□ 0.28
LINC00593-201ENST00000558385 C19orf44Q9H6X5 657 aa16.81■□□□□ 0.28
LINC00593-201ENST00000558385 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
LINC00593-201ENST00000558385 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
LINC00593-201ENST00000558385 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
LINC00593-201ENST00000558385 DCCP43146 1447 aa16.78■□□□□ 0.28
LINC00593-201ENST00000558385 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.28
LINC00593-201ENST00000558385 C11orf95C9JLR9 678 aaPredicted RBP16.77■□□□□ 0.28
LINC00593-201ENST00000558385 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
LINC00593-201ENST00000558385 TULP4Q9NRJ4 1543 aa16.76■□□□□ 0.27
LINC00593-201ENST00000558385 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
LINC00593-201ENST00000558385 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
LINC00593-201ENST00000558385 RBM33Q96EV2 1170 aaKnown RBP16.75■□□□□ 0.27
LINC00593-201ENST00000558385 MSH6P52701 1360 aa16.75■□□□□ 0.27
LINC00593-201ENST00000558385 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
LINC00593-201ENST00000558385 CADPS2Q86UW7 1296 aa16.74■□□□□ 0.27
LINC00593-201ENST00000558385 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
LINC00593-201ENST00000558385 CCDC7Q96M83 1385 aa16.74■□□□□ 0.27
LINC00593-201ENST00000558385 WASHC2AQ641Q2 1341 aa16.73■□□□□ 0.27
LINC00593-201ENST00000558385 SRPK2P78362 688 aaKnown RBP16.73■□□□□ 0.27
LINC00593-201ENST00000558385 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
LINC00593-201ENST00000558385 ANKARQ7Z5J8 1434 aa16.72■□□□□ 0.27
LINC00593-201ENST00000558385 ATF3P18847 181 aa16.72■□□□□ 0.27
LINC00593-201ENST00000558385 CCDC61Q9Y6R9 512 aa16.72■□□□□ 0.27
LINC00593-201ENST00000558385 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
LINC00593-201ENST00000558385 NUDT16Q96DE0 195 aaKnown RBP16.71■□□□□ 0.27
LINC00593-201ENST00000558385 CABP2Q9NPB3 220 aa16.71■□□□□ 0.27
LINC00593-201ENST00000558385 RGS17Q9UGC6 210 aaPredicted RBP16.71■□□□□ 0.27
LINC00593-201ENST00000558385 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
LINC00593-201ENST00000558385 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
LINC00593-201ENST00000558385 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
LINC00593-201ENST00000558385 PRR36Q9H6K5 1346 aa16.68■□□□□ 0.26
LINC00593-201ENST00000558385 ATP7BP35670 1465 aa16.67■□□□□ 0.26
LINC00593-201ENST00000558385 MST1RQ04912 1400 aa16.66■□□□□ 0.26
LINC00593-201ENST00000558385 USP32Q8NFA0 1604 aa16.66■□□□□ 0.26
LINC00593-201ENST00000558385 ITSN1Q15811 1721 aa16.65■□□□□ 0.26
LINC00593-201ENST00000558385 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
LINC00593-201ENST00000558385 C1orf167Q5SNV9 1468 aa16.65■□□□□ 0.26
LINC00593-201ENST00000558385 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
LINC00593-201ENST00000558385 ZNF692Q9BU19 519 aaPredicted RBP16.64■□□□□ 0.25
LINC00593-201ENST00000558385 SLC12A5Q9H2X9 1139 aa16.64■□□□□ 0.25
LINC00593-201ENST00000558385 CABP1Q9NZU7 370 aa16.64■□□□□ 0.25
LINC00593-201ENST00000558385 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
LINC00593-201ENST00000558385 POLR3GLQ9BT43 218 aa16.63■□□□□ 0.25
LINC00593-201ENST00000558385 MYOM1P52179 1685 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 NUTM2FA1L443 756 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 PHF8Q9UPP1 1060 aa16.62■□□□□ 0.25
LINC00593-201ENST00000558385 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
LINC00593-201ENST00000558385 ANKRD36BQ8N2N9 1353 aa16.61■□□□□ 0.25
LINC00593-201ENST00000558385 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
LINC00593-201ENST00000558385 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
LINC00593-201ENST00000558385 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
LINC00593-201ENST00000558385 ORAI2Q96SN7 254 aa16.59■□□□□ 0.25
LINC00593-201ENST00000558385 PANK3Q9H999 370 aa16.59■□□□□ 0.25
LINC00593-201ENST00000558385 ACEP12821 1306 aa16.59■□□□□ 0.25
LINC00593-201ENST00000558385 POTEAQ6S8J7 498 aa16.58■□□□□ 0.24
LINC00593-201ENST00000558385 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
LINC00593-201ENST00000558385 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
LINC00593-201ENST00000558385 KIF1AQ12756 1690 aa16.58■□□□□ 0.24
LINC00593-201ENST00000558385 PER1O15534 1290 aaPredicted RBP16.57■□□□□ 0.24
LINC00593-201ENST00000558385 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
LINC00593-201ENST00000558385 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
LINC00593-201ENST00000558385 BRINP3Q76B58 766 aa16.56■□□□□ 0.24
LINC00593-201ENST00000558385 PMFBP1Q8TBY8 1022 aa16.56■□□□□ 0.24
LINC00593-201ENST00000558385 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
LINC00593-201ENST00000558385 CARD14Q9BXL6 1004 aa16.55■□□□□ 0.24
LINC00593-201ENST00000558385 PRKRIP1Q9H875 184 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms