RNA–Protein interactions for RNA: ENST00000558070.1

TRPM1-205, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-205ENST00000558070 POLR3EQ9NVU0 708 aa7.31□□□□□ -1.24
TRPM1-205ENST00000558070 PCDHGC3Q9UN70 934 aa7.31□□□□□ -1.24
TRPM1-205ENST00000558070 SALL2Q9Y467 1007 aaPredicted RBP7.31□□□□□ -1.24
TRPM1-205ENST00000558070 FDX1P10109 184 aa7.3□□□□□ -1.24
TRPM1-205ENST00000558070 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRPM1-205ENST00000558070 ZPR1O75312 459 aa7.29□□□□□ -1.24
TRPM1-205ENST00000558070 THAP11Q96EK4 314 aa7.29□□□□□ -1.24
TRPM1-205ENST00000558070 PCDHB15Q9Y5E8 787 aa7.29□□□□□ -1.24
TRPM1-205ENST00000558070 GGCXP38435 758 aa7.28□□□□□ -1.24
TRPM1-205ENST00000558070 Q3C1V9 767 aa7.28□□□□□ -1.24
TRPM1-205ENST00000558070 PRPF38BQ5VTL8 546 aaKnown RBP7.28□□□□□ -1.24
TRPM1-205ENST00000558070 PPP1R18Q6NYC8 613 aa7.28□□□□□ -1.24
TRPM1-205ENST00000558070 BRICD5Q6PL45 260 aa7.28□□□□□ -1.24
TRPM1-205ENST00000558070 PROCA1Q8NCQ7 364 aaPredicted RBP7.28□□□□□ -1.24
TRPM1-205ENST00000558070 NKX2-3Q8TAU0 364 aa7.28□□□□□ -1.24
TRPM1-205ENST00000558070 LILRB3O75022 631 aa7.27□□□□□ -1.25
TRPM1-205ENST00000558070 PCMTD1Q96MG8 357 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-205ENST00000558070 IRX2Q9BZI1 471 aaPredicted RBP7.27□□□□□ -1.25
TRPM1-205ENST00000558070 RB1CC1Q8TDY2 1594 aa7.26□□□□□ -1.25
TRPM1-205ENST00000558070 QPCTQ16769 361 aa7.26□□□□□ -1.25
TRPM1-205ENST00000558070 RNF19BQ6ZMZ0 732 aa7.26□□□□□ -1.25
TRPM1-205ENST00000558070 FMNL1O95466 1100 aaPredicted RBP7.25□□□□□ -1.25
TRPM1-205ENST00000558070 MTMR2Q13614 643 aa7.25□□□□□ -1.25
TRPM1-205ENST00000558070 FBXO31Q5XUX0 539 aaPredicted RBP7.25□□□□□ -1.25
TRPM1-205ENST00000558070 PPP2R2DQ66LE6 453 aa7.25□□□□□ -1.25
TRPM1-205ENST00000558070 ZBTB3Q9H5J0 574 aa7.25□□□□□ -1.25
TRPM1-205ENST00000558070 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.25□□□□□ -1.25
TRPM1-205ENST00000558070 DCAF1Q9Y4B6 1507 aa7.24□□□□□ -1.25
TRPM1-205ENST00000558070 SPDYE5A6NIY4 337 aa7.24□□□□□ -1.25
TRPM1-205ENST00000558070 TLL1O43897 1013 aa7.24□□□□□ -1.25
TRPM1-205ENST00000558070 CABLES1Q8TDN4 633 aa7.24□□□□□ -1.25
TRPM1-205ENST00000558070 SYMPKQ92797 1274 aaKnown RBP7.24□□□□□ -1.25
TRPM1-205ENST00000558070 USB1Q9BQ65 265 aaKnown RBP7.24□□□□□ -1.25
TRPM1-205ENST00000558070 C6orf229H3BNL8 230 aa7.23□□□□□ -1.25
TRPM1-205ENST00000558070 ADH1BP00325 375 aa7.23□□□□□ -1.25
TRPM1-205ENST00000558070 CSPP1Q1MSJ5 1256 aa7.23□□□□□ -1.25
TRPM1-205ENST00000558070 RETREG3Q86VR2 466 aa7.23□□□□□ -1.25
TRPM1-205ENST00000558070 FAM160A2Q8N612 972 aaPredicted RBP7.23□□□□□ -1.25
TRPM1-205ENST00000558070 SPSB2Q99619 263 aa7.23□□□□□ -1.25
TRPM1-205ENST00000558070 MSS51Q4VC12 460 aa7.22□□□□□ -1.25
TRPM1-205ENST00000558070 RTL5Q5HYW3 569 aaPredicted RBP7.22□□□□□ -1.25
TRPM1-205ENST00000558070 PRKD2Q9BZL6 878 aa7.22□□□□□ -1.25
TRPM1-205ENST00000558070 NUTM2BA6NNL0 878 aaPredicted RBP7.21□□□□□ -1.26
TRPM1-205ENST00000558070 NUTM2EB1AL46 878 aaPredicted RBP7.21□□□□□ -1.26
TRPM1-205ENST00000558070 MYT1Q01538 1121 aa7.21□□□□□ -1.26
TRPM1-205ENST00000558070 NUTM2DQ5VT03 806 aaPredicted RBP7.21□□□□□ -1.26
TRPM1-205ENST00000558070 NUTM2AQ8IVF1 878 aaPredicted RBP7.21□□□□□ -1.26
TRPM1-205ENST00000558070 CFAP99D6REC4 459 aa7.2□□□□□ -1.26
TRPM1-205ENST00000558070 DESI1Q6ICB0 168 aa7.2□□□□□ -1.26
TRPM1-205ENST00000558070 PRR7Q8TB68 274 aa7.2□□□□□ -1.26
TRPM1-205ENST00000558070 S1PR4O95977 384 aa7.19□□□□□ -1.26
TRPM1-205ENST00000558070 RFC5P40937 340 aa7.19□□□□□ -1.26
TRPM1-205ENST00000558070 MMP16P51512 607 aa7.19□□□□□ -1.26
TRPM1-205ENST00000558070 ATP1B4Q9UN42 357 aaPredicted RBP7.19□□□□□ -1.26
TRPM1-205ENST00000558070 ZCCHC6Q5VYS8 1495 aaKnown RBP7.18□□□□□ -1.26
TRPM1-205ENST00000558070 DXOO77932 396 aaKnown RBP7.18□□□□□ -1.26
TRPM1-205ENST00000558070 SLC6A16Q9GZN6 736 aa7.18□□□□□ -1.26
TRPM1-205ENST00000558070 V9GY48 417 aaPredicted RBP7.18□□□□□ -1.26
TRPM1-205ENST00000558070 RNF223E7ERA6 249 aa7.17□□□□□ -1.26
TRPM1-205ENST00000558070 PRDM9Q9NQV7 894 aa7.17□□□□□ -1.26
TRPM1-205ENST00000558070 JUNDP17535 347 aa7.16□□□□□ -1.26
TRPM1-205ENST00000558070 TMEM259Q4ZIN3 620 aa7.16□□□□□ -1.26
TRPM1-205ENST00000558070 Q6ZNB5 142 aa7.16□□□□□ -1.26
TRPM1-205ENST00000558070 LYPD8Q6UX82 237 aa7.15□□□□□ -1.26
TRPM1-205ENST00000558070 PPEF1O14829 653 aaPredicted RBP7.14□□□□□ -1.27
TRPM1-205ENST00000558070 GFRA3O60609 400 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 SLC19A1P41440 591 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 LAPTM4AQ15012 233 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 ANKLE1Q8NAG6 615 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 BANK1Q8NDB2 785 aa7.14□□□□□ -1.27
TRPM1-205ENST00000558070 HELBQ8NG08 1087 aaPredicted RBP7.14□□□□□ -1.27
TRPM1-205ENST00000558070 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
TRPM1-205ENST00000558070 AP1G2O75843 785 aa7.13□□□□□ -1.27
TRPM1-205ENST00000558070 PTPRNQ16849 979 aa7.13□□□□□ -1.27
TRPM1-205ENST00000558070 ZEB1P37275 1124 aaPredicted RBP7.12□□□□□ -1.27
TRPM1-205ENST00000558070 NACADO15069 1562 aa7.12□□□□□ -1.27
TRPM1-205ENST00000558070 MYO15BQ96JP2 1530 aa7.11□□□□□ -1.27
TRPM1-205ENST00000558070 SOCS7O14512 581 aa7.11□□□□□ -1.27
TRPM1-205ENST00000558070 USP17L8P0C7I0 530 aa7.11□□□□□ -1.27
TRPM1-205ENST00000558070 TSC1Q92574 1164 aa7.11□□□□□ -1.27
TRPM1-205ENST00000558070 EVA1BQ9NVM1 165 aa7.11□□□□□ -1.27
TRPM1-205ENST00000558070 CCNYL3P0C7X3 344 aa7.1□□□□□ -1.27
TRPM1-205ENST00000558070 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
TRPM1-205ENST00000558070 PDZRN3Q9UPQ7 1066 aa7.1□□□□□ -1.27
TRPM1-205ENST00000558070 FCF1Q9Y324 198 aaKnown RBP7.1□□□□□ -1.27
TRPM1-205ENST00000558070 NRG2O14511 850 aaPredicted RBP7.09□□□□□ -1.27
TRPM1-205ENST00000558070 F12P00748 615 aaPredicted RBP7.09□□□□□ -1.27
TRPM1-205ENST00000558070 LRRN4Q8WUT4 740 aa7.09□□□□□ -1.27
TRPM1-205ENST00000558070 GTF3C3Q9Y5Q9 886 aa7.09□□□□□ -1.27
TRPM1-205ENST00000558070 SUPT5HO00267 1087 aaKnown RBP7.08□□□□□ -1.28
TRPM1-205ENST00000558070 PLA2G2CQ5R387 149 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 SPRYD7Q5W111 196 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 MTMR14Q8NCE2 650 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 PCGF6Q9BYE7 350 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 HMX1Q9NP08 348 aaPredicted RBP7.08□□□□□ -1.28
TRPM1-205ENST00000558070 SNRKQ9NRH2 765 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
TRPM1-205ENST00000558070 CECR2Q9BXF3 1484 aa7.07□□□□□ -1.28
TRPM1-205ENST00000558070 KCNH2Q12809 1159 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms