RNA–Protein interactions for RNA: ENST00000557473.1

PRKCH-224, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-224ENST00000557473 ARHGEF1Q92888 912 aaKnown RBP9.85□□□□□ -0.83
PRKCH-224ENST00000557473 NBPF26B4DH59 902 aa9.84□□□□□ -0.83
PRKCH-224ENST00000557473 PADI6Q6TGC4 694 aa9.84□□□□□ -0.83
PRKCH-224ENST00000557473 SAMD7Q7Z3H4 446 aa9.84□□□□□ -0.83
PRKCH-224ENST00000557473 CERKQ8TCT0 537 aa9.84□□□□□ -0.83
PRKCH-224ENST00000557473 KIF21BO75037 1637 aa9.84□□□□□ -0.83
PRKCH-224ENST00000557473 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
PRKCH-224ENST00000557473 NUDT18Q6ZVK8 323 aa9.83□□□□□ -0.84
PRKCH-224ENST00000557473 P3H3Q8IVL6 736 aa9.83□□□□□ -0.84
PRKCH-224ENST00000557473 TATDN2Q93075 761 aa9.83□□□□□ -0.84
PRKCH-224ENST00000557473 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
PRKCH-224ENST00000557473 TSR3Q9UJK0 312 aaKnown RBP9.82□□□□□ -0.84
PRKCH-224ENST00000557473 FHOD3Q2V2M9 1422 aa9.82□□□□□ -0.84
PRKCH-224ENST00000557473 FRMPD1Q5SYB0 1578 aa9.81□□□□□ -0.84
PRKCH-224ENST00000557473 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
PRKCH-224ENST00000557473 ADAMTSL3P82987 1691 aa9.8□□□□□ -0.84
PRKCH-224ENST00000557473 A0A0G2JS52 829 aa9.79□□□□□ -0.84
PRKCH-224ENST00000557473 NPDC1Q9NQX5 325 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-224ENST00000557473 ARHGEF40Q8TER5 1519 aa9.78□□□□□ -0.84
PRKCH-224ENST00000557473 PPP4CP60510 307 aa9.78□□□□□ -0.84
PRKCH-224ENST00000557473 CFAP74Q9C0B2 1584 aa9.78□□□□□ -0.84
PRKCH-224ENST00000557473 NUTM2FA1L443 756 aa9.77□□□□□ -0.85
PRKCH-224ENST00000557473 SEMA3EO15041 775 aa9.77□□□□□ -0.85
PRKCH-224ENST00000557473 HAP1P54257 671 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-224ENST00000557473 PTPRMP28827 1452 aa9.77□□□□□ -0.85
PRKCH-224ENST00000557473 ZMYM4Q5VZL5 1548 aa9.77□□□□□ -0.85
PRKCH-224ENST00000557473 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRKCH-224ENST00000557473 BCORL1Q5H9F3 1711 aa9.76□□□□□ -0.85
PRKCH-224ENST00000557473 RAPGEF3O95398 923 aa9.76□□□□□ -0.85
PRKCH-224ENST00000557473 FANCAO15360 1455 aa9.76□□□□□ -0.85
PRKCH-224ENST00000557473 DENND4BO75064 1496 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-224ENST00000557473 RICTORQ6R327 1708 aa9.76□□□□□ -0.85
PRKCH-224ENST00000557473 TTC37Q6PGP7 1564 aa9.75□□□□□ -0.85
PRKCH-224ENST00000557473 PLEKHD1A6NEE1 506 aa9.75□□□□□ -0.85
PRKCH-224ENST00000557473 ITGBL1O95965 494 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-224ENST00000557473 IFFO2Q5TF58 517 aa9.75□□□□□ -0.85
PRKCH-224ENST00000557473 NYAP1Q6ZVC0 841 aa9.75□□□□□ -0.85
PRKCH-224ENST00000557473 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
PRKCH-224ENST00000557473 AKNAQ7Z591 1439 aa9.74□□□□□ -0.85
PRKCH-224ENST00000557473 MADDQ8WXG6 1647 aa9.74□□□□□ -0.85
PRKCH-224ENST00000557473 MAGI2Q86UL8 1455 aa9.73□□□□□ -0.85
PRKCH-224ENST00000557473 CDK13Q14004 1512 aaKnown RBP9.73□□□□□ -0.85
PRKCH-224ENST00000557473 KCNC4Q03721 635 aa9.73□□□□□ -0.85
PRKCH-224ENST00000557473 SWT1Q5T5J6 900 aaKnown RBP9.73□□□□□ -0.85
PRKCH-224ENST00000557473 FMN1Q68DA7 1419 aa9.73□□□□□ -0.85
PRKCH-224ENST00000557473 HECW1Q76N89 1606 aa9.72□□□□□ -0.85
PRKCH-224ENST00000557473 PRKCSHP14314 528 aaPredicted RBP9.72□□□□□ -0.85
PRKCH-224ENST00000557473 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
PRKCH-224ENST00000557473 FAM161AQ3B820 660 aa9.72□□□□□ -0.85
PRKCH-224ENST00000557473 TTC13Q8NBP0 860 aa9.72□□□□□ -0.85
PRKCH-224ENST00000557473 PTGDRQ13258 359 aa9.71□□□□□ -0.86
PRKCH-224ENST00000557473 PLCH2O75038 1416 aa9.71□□□□□ -0.86
PRKCH-224ENST00000557473 ARHGAP35Q9NRY4 1499 aa9.71□□□□□ -0.86
PRKCH-224ENST00000557473 ZFYVE16Q7Z3T8 1539 aa9.71□□□□□ -0.86
PRKCH-224ENST00000557473 PCF11O94913 1555 aaKnown RBP9.71□□□□□ -0.86
PRKCH-224ENST00000557473 RANGAP1P46060 587 aaPredicted RBP9.7□□□□□ -0.86
PRKCH-224ENST00000557473 POGZQ7Z3K3 1410 aa9.7□□□□□ -0.86
PRKCH-224ENST00000557473 LMTK3Q96Q04 1460 aa9.7□□□□□ -0.86
PRKCH-224ENST00000557473 YEATS2Q9ULM3 1422 aa9.68□□□□□ -0.86
PRKCH-224ENST00000557473 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
PRKCH-224ENST00000557473 APLP1P51693 650 aa9.68□□□□□ -0.86
PRKCH-224ENST00000557473 MTRQ99707 1265 aa9.68□□□□□ -0.86
PRKCH-224ENST00000557473 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
PRKCH-224ENST00000557473 RIMS1Q86UR5 1692 aaKnown RBP9.67□□□□□ -0.86
PRKCH-224ENST00000557473 EYA1Q99502 592 aa9.67□□□□□ -0.86
PRKCH-224ENST00000557473 KIF14Q15058 1648 aa9.67□□□□□ -0.86
PRKCH-224ENST00000557473 TROQ12816 1431 aaPredicted RBP9.66□□□□□ -0.86
PRKCH-224ENST00000557473 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
PRKCH-224ENST00000557473 MYO5CQ9NQX4 1742 aa9.66□□□□□ -0.86
PRKCH-224ENST00000557473 RBM26Q5T8P6 1007 aaKnown RBP9.66□□□□□ -0.86
PRKCH-224ENST00000557473 COPS2P61201 443 aa9.65□□□□□ -0.86
PRKCH-224ENST00000557473 TJAP1Q5JTD0 557 aa9.65□□□□□ -0.86
PRKCH-224ENST00000557473 SLF2Q8IX21 1173 aa9.65□□□□□ -0.86
PRKCH-224ENST00000557473 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-224ENST00000557473 KDM5CP41229 1560 aa9.65□□□□□ -0.86
PRKCH-224ENST00000557473 ZNF518AQ6AHZ1 1483 aa9.65□□□□□ -0.87
PRKCH-224ENST00000557473 C9orf84Q5VXU9 1444 aa9.65□□□□□ -0.87
PRKCH-224ENST00000557473 FCHSD2O94868 740 aa9.64□□□□□ -0.87
PRKCH-224ENST00000557473 UBTFP17480 764 aaKnown RBP9.64□□□□□ -0.87
PRKCH-224ENST00000557473 ZNF516Q92618 1163 aa9.64□□□□□ -0.87
PRKCH-224ENST00000557473 ADGRG1Q9Y653 693 aa9.64□□□□□ -0.87
PRKCH-224ENST00000557473 ARHGEF12Q9NZN5 1544 aa9.64□□□□□ -0.87
PRKCH-224ENST00000557473 CLIP1P30622 1438 aa9.64□□□□□ -0.87
PRKCH-224ENST00000557473 EFCAB2Q5VUJ9 269 aa9.63□□□□□ -0.87
PRKCH-224ENST00000557473 ATP10AO60312 1499 aa9.63□□□□□ -0.87
PRKCH-224ENST00000557473 FER1L4A9Z1Z3 1794 aa9.63□□□□□ -0.87
PRKCH-224ENST00000557473 REREQ9P2R6 1566 aa9.63□□□□□ -0.87
PRKCH-224ENST00000557473 CCDC18Q5T9S5 1454 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 RGS20O76081 388 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 SLC4A3P48751 1232 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 RBM46Q8TBY0 533 aaKnown RBP9.62□□□□□ -0.87
PRKCH-224ENST00000557473 FBXO41Q8TF61 875 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 IRX2Q9BZI1 471 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-224ENST00000557473 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 KDM2AQ9Y2K7 1162 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
PRKCH-224ENST00000557473 ARHGAP5Q13017 1502 aa9.61□□□□□ -0.87
PRKCH-224ENST00000557473 TESPA1A2RU30 521 aaPredicted RBP9.61□□□□□ -0.87
PRKCH-224ENST00000557473 DNAJB2P25686 324 aa9.61□□□□□ -0.87
PRKCH-224ENST00000557473 CASKIN1Q8WXD9 1431 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms