RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 RIMBP3CA6NJZ7 1639 aa25.36■■□□□ 1.65
FOXN3-214ENST00000557258 RIMBP3BA6NNM3 1639 aa25.36■■□□□ 1.65
FOXN3-214ENST00000557258 RIMBP3Q9UFD9 1639 aa25.36■■□□□ 1.65
FOXN3-214ENST00000557258 SLC52A1Q9NWF4 448 aa25.35■■□□□ 1.65
FOXN3-214ENST00000557258 MYO5BQ9ULV0 1848 aa25.35■■□□□ 1.65
FOXN3-214ENST00000557258 PIK3C2BO00750 1634 aa25.35■■□□□ 1.65
FOXN3-214ENST00000557258 MTHFSP49914 203 aa25.34■■□□□ 1.65
FOXN3-214ENST00000557258 PRAM1Q96QH2 718 aa25.34■■□□□ 1.65
FOXN3-214ENST00000557258 SLFN5Q08AF3 891 aa25.33■■□□□ 1.65
FOXN3-214ENST00000557258 TULP4Q9NRJ4 1543 aa25.32■■□□□ 1.64
FOXN3-214ENST00000557258 POGKQ9P215 609 aa25.31■■□□□ 1.64
FOXN3-214ENST00000557258 BCAR3O75815 825 aa25.3■■□□□ 1.64
FOXN3-214ENST00000557258 CGNL1Q0VF96 1302 aa25.3■■□□□ 1.64
FOXN3-214ENST00000557258 ZC3H13Q5T200 1668 aaKnown RBP25.3■■□□□ 1.64
FOXN3-214ENST00000557258 ARHGAP31Q2M1Z3 1444 aa25.3■■□□□ 1.64
FOXN3-214ENST00000557258 GGNBP2Q9H3C7 697 aa25.29■■□□□ 1.64
FOXN3-214ENST00000557258 ARHGEF28Q8N1W1 1705 aaKnown RBP25.27■■□□□ 1.64
FOXN3-214ENST00000557258 ERICH6Q7L0X2 663 aa25.27■■□□□ 1.64
FOXN3-214ENST00000557258 PREX1Q8TCU6 1659 aa25.26■■□□□ 1.63
FOXN3-214ENST00000557258 DIP2BQ9P265 1576 aa25.26■■□□□ 1.63
FOXN3-214ENST00000557258 NPM2Q86SE8 214 aaKnown RBP25.25■■□□□ 1.63
FOXN3-214ENST00000557258 WAPLQ7Z5K2 1190 aa25.24■■□□□ 1.63
FOXN3-214ENST00000557258 A0A1W2PP64 1363 aa25.24■■□□□ 1.63
FOXN3-214ENST00000557258 POLR3AO14802 1390 aaPredicted RBP25.24■■□□□ 1.63
FOXN3-214ENST00000557258 WWC1Q8IX03 1113 aa25.23■■□□□ 1.63
FOXN3-214ENST00000557258 TMEM131LA2VDJ0 1609 aa25.23■■□□□ 1.63
FOXN3-214ENST00000557258 TCP11L2Q8N4U5 519 aa25.22■■□□□ 1.63
FOXN3-214ENST00000557258 ANKRD36BQ8N2N9 1353 aa25.21■■□□□ 1.63
FOXN3-214ENST00000557258 U2AF1L5P0DN76 240 aaPredicted RBP25.21■■□□□ 1.63
FOXN3-214ENST00000557258 U2AF1Q01081 240 aaKnown RBP eCLIP25.21■■□□□ 1.632e-7■□□□□ 8.2
FOXN3-214ENST00000557258 FBLN1P23142 703 aa25.2■■□□□ 1.63
FOXN3-214ENST00000557258 YTHDC2Q9H6S0 1430 aaKnown RBP25.19■■□□□ 1.62
FOXN3-214ENST00000557258 TRMT2AQ8IZ69 625 aaKnown RBP25.19■■□□□ 1.62
FOXN3-214ENST00000557258 E9PSI1 815 aa25.19■■□□□ 1.62
FOXN3-214ENST00000557258 U2SURPO15042 1029 aaKnown RBP25.18■■□□□ 1.62
FOXN3-214ENST00000557258 CDK19Q9BWU1 502 aa25.17■■□□□ 1.62
FOXN3-214ENST00000557258 BCL2L13Q9BXK5 485 aa25.17■■□□□ 1.62
FOXN3-214ENST00000557258 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
FOXN3-214ENST00000557258 PTPRMP28827 1452 aa25.17■■□□□ 1.62
FOXN3-214ENST00000557258 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
FOXN3-214ENST00000557258 PAK3O75914 559 aaPredicted RBP25.16■■□□□ 1.62
FOXN3-214ENST00000557258 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
FOXN3-214ENST00000557258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.16■■□□□ 1.621e-7■■■□□ 14.8
FOXN3-214ENST00000557258 RUNDC1Q96C34 613 aa25.16■■□□□ 1.62
FOXN3-214ENST00000557258 CFAP53Q96M91 514 aa25.16■■□□□ 1.62
FOXN3-214ENST00000557258 SHPRHQ149N8 1683 aa25.15■■□□□ 1.62
FOXN3-214ENST00000557258 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
FOXN3-214ENST00000557258 FRAT1Q92837 279 aaPredicted RBP25.14■■□□□ 1.62
FOXN3-214ENST00000557258 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
FOXN3-214ENST00000557258 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
FOXN3-214ENST00000557258 FYB1O15117 783 aa25.12■■□□□ 1.61
FOXN3-214ENST00000557258 PDE4AP27815 886 aa25.12■■□□□ 1.61
FOXN3-214ENST00000557258 CANXP27824 592 aaKnown RBP25.11■■□□□ 1.61
FOXN3-214ENST00000557258 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.11■■□□□ 1.61
FOXN3-214ENST00000557258 ESF1Q9H501 851 aaKnown RBP25.11■■□□□ 1.61
FOXN3-214ENST00000557258 ALKQ9UM73 1620 aa25.11■■□□□ 1.61
FOXN3-214ENST00000557258 PANK1Q8TE04 598 aa25.1■■□□□ 1.61
FOXN3-214ENST00000557258 ANP32AP39687 249 aaKnown RBP25.1■■□□□ 1.61
FOXN3-214ENST00000557258 TCERG1O14776 1098 aaKnown RBP25.09■■□□□ 1.61
FOXN3-214ENST00000557258 TERF2IPQ9NYB0 399 aa25.09■■□□□ 1.61
FOXN3-214ENST00000557258 TNNQ9UQP3 1299 aa25.09■■□□□ 1.61
FOXN3-214ENST00000557258 NCKAP5LQ9HCH0 1330 aa25.08■■□□□ 1.61
FOXN3-214ENST00000557258 TXNDC2Q86VQ3 553 aa25.07■■□□□ 1.6
FOXN3-214ENST00000557258 ABCC11Q96J66 1382 aa25.07■■□□□ 1.6
FOXN3-214ENST00000557258 A2ML1A8K2U0 1454 aa25.07■■□□□ 1.6
FOXN3-214ENST00000557258 COG6Q9Y2V7 657 aa25.07■■□□□ 1.6
FOXN3-214ENST00000557258 RIMS2Q9UQ26 1411 aa25.06■■□□□ 1.6
FOXN3-214ENST00000557258 RGS3P49796 1198 aa25.05■■□□□ 1.6
FOXN3-214ENST00000557258 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
FOXN3-214ENST00000557258 CD163L1Q9NR16 1453 aa25.05■■□□□ 1.6
FOXN3-214ENST00000557258 TSR2Q969E8 191 aaKnown RBP25.04■■□□□ 1.6
FOXN3-214ENST00000557258 PUS7Q96PZ0 661 aaKnown RBP25.04■■□□□ 1.6
FOXN3-214ENST00000557258 KDM2BQ8NHM5 1336 aa25.04■■□□□ 1.6
FOXN3-214ENST00000557258 ATAD2Q6PL18 1390 aa25.04■■□□□ 1.6
FOXN3-214ENST00000557258 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
FOXN3-214ENST00000557258 CLUAP1Q96AJ1 413 aa25.03■■□□□ 1.6
FOXN3-214ENST00000557258 BACH2Q9BYV9 841 aa25.02■■□□□ 1.6
FOXN3-214ENST00000557258 IQSEC2Q5JU85 1478 aa25.01■■□□□ 1.59
FOXN3-214ENST00000557258 USP32Q8NFA0 1604 aa25.01■■□□□ 1.59
FOXN3-214ENST00000557258 METP08581 1390 aa25.01■■□□□ 1.59
FOXN3-214ENST00000557258 NSD2O96028 1365 aa25■■□□□ 1.59
FOXN3-214ENST00000557258 ZMYM3Q14202 1370 aa25■■□□□ 1.59
FOXN3-214ENST00000557258 IPO9Q96P70 1041 aaKnown RBP25■■□□□ 1.59
FOXN3-214ENST00000557258 ZRANB1Q9UGI0 708 aa25■■□□□ 1.59
FOXN3-214ENST00000557258 NUTM2FA1L443 756 aa24.99■■□□□ 1.59
FOXN3-214ENST00000557258 NBR1Q14596 966 aa24.99■■□□□ 1.59
FOXN3-214ENST00000557258 RARSP54136 660 aaKnown RBP24.98■■□□□ 1.59
FOXN3-214ENST00000557258 CENPQQ7L2Z9 268 aaPredicted RBP24.98■■□□□ 1.59
FOXN3-214ENST00000557258 ARHGEF40Q8TER5 1519 aa24.98■■□□□ 1.59
FOXN3-214ENST00000557258 IGHDP01880 384 aa24.97■■□□□ 1.59
FOXN3-214ENST00000557258 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
FOXN3-214ENST00000557258 RLBP1P12271 317 aa24.97■■□□□ 1.59
FOXN3-214ENST00000557258 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
FOXN3-214ENST00000557258 AGLP35573 1532 aa24.96■■□□□ 1.59
FOXN3-214ENST00000557258 NGEFQ8N5V2 710 aa24.95■■□□□ 1.58
FOXN3-214ENST00000557258 NLRP1Q9C000 1473 aa24.94■■□□□ 1.58
FOXN3-214ENST00000557258 MAPK8IP3Q9UPT6 1336 aa24.94■■□□□ 1.58
FOXN3-214ENST00000557258 NINLQ9Y2I6 1382 aa24.94■■□□□ 1.58
FOXN3-214ENST00000557258 NME9Q86XW9 330 aa24.94■■□□□ 1.58
FOXN3-214ENST00000557258 SPATA31D1Q6ZQQ2 1576 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms