RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-215ENST00000556959 CCDC144AA2RUR9 1427 aa12.25□□□□□ -0.45
SIPA1L1-215ENST00000556959 RGPD8O14715 1765 aaPredicted RBP12.25□□□□□ -0.45
SIPA1L1-215ENST00000556959 PPLO60437 1756 aa12.25□□□□□ -0.45
SIPA1L1-215ENST00000556959 VGFO15240 615 aaPredicted RBP12.24□□□□□ -0.45
SIPA1L1-215ENST00000556959 ADGRF5Q8IZF2 1346 aa12.24□□□□□ -0.45
SIPA1L1-215ENST00000556959 USP21Q9UK80 565 aa12.24□□□□□ -0.45
SIPA1L1-215ENST00000556959 BRWD3Q6RI45 1802 aa12.23□□□□□ -0.45
SIPA1L1-215ENST00000556959 LAMC1P11047 1609 aa12.23□□□□□ -0.45
SIPA1L1-215ENST00000556959 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
SIPA1L1-215ENST00000556959 WAPLQ7Z5K2 1190 aa12.23□□□□□ -0.45
SIPA1L1-215ENST00000556959 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
SIPA1L1-215ENST00000556959 RGL3Q3MIN7 710 aa12.22□□□□□ -0.45
SIPA1L1-215ENST00000556959 STK26Q9P289 416 aa12.22□□□□□ -0.45
SIPA1L1-215ENST00000556959 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
SIPA1L1-215ENST00000556959 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.45
SIPA1L1-215ENST00000556959 PTCH1Q13635 1447 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 FOXO3O43524 673 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 ESCO1Q5FWF5 840 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 TMEM132EQ6IEE7 984 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 BCL9LQ86UU0 1499 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 ATRNO75882 1429 aa12.2□□□□□ -0.46
SIPA1L1-215ENST00000556959 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
SIPA1L1-215ENST00000556959 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
SIPA1L1-215ENST00000556959 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
SIPA1L1-215ENST00000556959 PXDNQ92626 1479 aa12.18□□□□□ -0.46
SIPA1L1-215ENST00000556959 PIK3C2GO75747 1445 aa12.18□□□□□ -0.46
SIPA1L1-215ENST00000556959 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
SIPA1L1-215ENST00000556959 MYOM2P54296 1465 aa12.17□□□□□ -0.46
SIPA1L1-215ENST00000556959 TRPC5Q9UL62 973 aaPredicted RBP12.17□□□□□ -0.46
SIPA1L1-215ENST00000556959 NRXN1Q9ULB1 1477 aa12.16□□□□□ -0.46
SIPA1L1-215ENST00000556959 CABLES1Q8TDN4 633 aa12.16□□□□□ -0.46
SIPA1L1-215ENST00000556959 GLI3P10071 1580 aa12.16□□□□□ -0.46
SIPA1L1-215ENST00000556959 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
SIPA1L1-215ENST00000556959 TECPR2O15040 1411 aa12.15□□□□□ -0.46
SIPA1L1-215ENST00000556959 DEFB132Q7Z7B7 95 aa12.15□□□□□ -0.46
SIPA1L1-215ENST00000556959 LRPPRCP42704 1394 aaKnown RBP12.15□□□□□ -0.46
SIPA1L1-215ENST00000556959 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
SIPA1L1-215ENST00000556959 HRCP23327 699 aa12.13□□□□□ -0.47
SIPA1L1-215ENST00000556959 C14orf93Q9H972 538 aaKnown RBP12.13□□□□□ -0.47
SIPA1L1-215ENST00000556959 ABCC11Q96J66 1382 aa12.13□□□□□ -0.47
SIPA1L1-215ENST00000556959 FMN2Q9NZ56 1722 aa12.12□□□□□ -0.47
SIPA1L1-215ENST00000556959 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
SIPA1L1-215ENST00000556959 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
SIPA1L1-215ENST00000556959 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
SIPA1L1-215ENST00000556959 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
SIPA1L1-215ENST00000556959 RALGAPBQ86X10 1494 aa12.11□□□□□ -0.47
SIPA1L1-215ENST00000556959 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
SIPA1L1-215ENST00000556959 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
SIPA1L1-215ENST00000556959 NPHP3Q7Z494 1330 aa12.1□□□□□ -0.47
SIPA1L1-215ENST00000556959 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 DHX57Q6P158 1386 aaKnown RBP12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 FAM182BQ5T319 152 aa12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 KRT28Q7Z3Y7 464 aa12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 PLCH1Q4KWH8 1693 aa12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 SPATA31A3Q5VYP0 1347 aa12.09□□□□□ -0.47
SIPA1L1-215ENST00000556959 ABCA3Q99758 1704 aa12.08□□□□□ -0.47
SIPA1L1-215ENST00000556959 SLIT2O94813 1529 aa12.08□□□□□ -0.48
SIPA1L1-215ENST00000556959 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
SIPA1L1-215ENST00000556959 ADGRB1O14514 1584 aa12.08□□□□□ -0.48
SIPA1L1-215ENST00000556959 KNDC1Q76NI1 1749 aa12.08□□□□□ -0.48
SIPA1L1-215ENST00000556959 USP32Q8NFA0 1604 aa12.08□□□□□ -0.48
SIPA1L1-215ENST00000556959 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
SIPA1L1-215ENST00000556959 SEPT12Q8IYM1 358 aa12.07□□□□□ -0.48
SIPA1L1-215ENST00000556959 LMOD2Q6P5Q4 547 aa12.06□□□□□ -0.48
SIPA1L1-215ENST00000556959 PMFBP1Q8TBY8 1022 aa12.06□□□□□ -0.48
SIPA1L1-215ENST00000556959 SIRT1Q96EB6 747 aa12.06□□□□□ -0.48
SIPA1L1-215ENST00000556959 FAM83GA6ND36 823 aa12.05□□□□□ -0.48
SIPA1L1-215ENST00000556959 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
SIPA1L1-215ENST00000556959 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
SIPA1L1-215ENST00000556959 PRAM1Q96QH2 718 aa12.04□□□□□ -0.48
SIPA1L1-215ENST00000556959 CCDC9Q9Y3X0 531 aaKnown RBP12.04□□□□□ -0.48
SIPA1L1-215ENST00000556959 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
SIPA1L1-215ENST00000556959 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
SIPA1L1-215ENST00000556959 KIF1AQ12756 1690 aa12.03□□□□□ -0.48
SIPA1L1-215ENST00000556959 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
SIPA1L1-215ENST00000556959 DLC1Q96QB1 1528 aa12.02□□□□□ -0.48
SIPA1L1-215ENST00000556959 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
SIPA1L1-215ENST00000556959 TRPM3Q9HCF6 1732 aaPredicted RBP12.01□□□□□ -0.49
SIPA1L1-215ENST00000556959 TNS3Q68CZ2 1445 aa12.01□□□□□ -0.49
SIPA1L1-215ENST00000556959 HAP1P54257 671 aaPredicted RBP12□□□□□ -0.49
SIPA1L1-215ENST00000556959 VPS72Q15906 364 aa12□□□□□ -0.49
SIPA1L1-215ENST00000556959 FAM98CQ17RN3 349 aaKnown RBP12□□□□□ -0.49
SIPA1L1-215ENST00000556959 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
SIPA1L1-215ENST00000556959 PRR36Q9H6K5 1346 aa12□□□□□ -0.49
SIPA1L1-215ENST00000556959 NWD2Q9ULI1 1742 aa12□□□□□ -0.49
SIPA1L1-215ENST00000556959 A0A0G2JS52 829 aa11.99□□□□□ -0.49
SIPA1L1-215ENST00000556959 MYT1Q01538 1121 aa11.99□□□□□ -0.49
SIPA1L1-215ENST00000556959 EN1Q05925 392 aaPredicted RBP11.99□□□□□ -0.49
SIPA1L1-215ENST00000556959 KRT27Q7Z3Y8 459 aa11.99□□□□□ -0.49
SIPA1L1-215ENST00000556959 CCDC125Q86Z20 511 aa11.99□□□□□ -0.49
SIPA1L1-215ENST00000556959 MINK1Q8N4C8 1332 aaPredicted RBP11.98□□□□□ -0.49
SIPA1L1-215ENST00000556959 PSME1Q06323 249 aa11.98□□□□□ -0.49
SIPA1L1-215ENST00000556959 BTG4Q9NY30 223 aa11.98□□□□□ -0.49
SIPA1L1-215ENST00000556959 POGKQ9P215 609 aa11.98□□□□□ -0.49
SIPA1L1-215ENST00000556959 CRYBG1Q9Y4K1 1723 aa11.97□□□□□ -0.49
SIPA1L1-215ENST00000556959 ALS2Q96Q42 1657 aa11.97□□□□□ -0.49
SIPA1L1-215ENST00000556959 ADGRB2O60241 1585 aa11.97□□□□□ -0.49
SIPA1L1-215ENST00000556959 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
SIPA1L1-215ENST00000556959 STAC3Q96MF2 364 aa11.97□□□□□ -0.49
SIPA1L1-215ENST00000556959 NBPF1Q3BBV0 1214 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms