RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 PTCH1Q13635 1447 aa33.04■■■□□ 2.88
SIX4-203ENST00000556952 ROBO2Q9HCK4 1378 aa33.03■■■□□ 2.88
SIX4-203ENST00000556952 TMF1P82094 1093 aa33.02■■■□□ 2.88
SIX4-203ENST00000556952 FBXO41Q8TF61 875 aa33.02■■■□□ 2.88
SIX4-203ENST00000556952 STK26Q9P289 416 aa33.01■■■□□ 2.88
SIX4-203ENST00000556952 DDX10Q13206 875 aaKnown RBP33■■■□□ 2.87
SIX4-203ENST00000556952 NALCNQ8IZF0 1738 aa33■■■□□ 2.87
SIX4-203ENST00000556952 TECPR2O15040 1411 aa32.99■■■□□ 2.87
SIX4-203ENST00000556952 UBAP1LF5GYI3 381 aa32.99■■■□□ 2.87
SIX4-203ENST00000556952 ABCC11Q96J66 1382 aa32.98■■■□□ 2.87
SIX4-203ENST00000556952 DISP3Q9P2K9 1392 aa32.98■■■□□ 2.87
SIX4-203ENST00000556952 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.98■■■□□ 2.87
SIX4-203ENST00000556952 NCOA3Q9Y6Q9 1424 aa32.97■■■□□ 2.87
SIX4-203ENST00000556952 MSH6P52701 1360 aa32.94■■■□□ 2.86
SIX4-203ENST00000556952 CDCA8Q53HL2 280 aa32.93■■■□□ 2.86
SIX4-203ENST00000556952 C14orf37Q86TY3 774 aa32.92■■■□□ 2.86
SIX4-203ENST00000556952 ILDR1Q86SU0 546 aaPredicted RBP32.92■■■□□ 2.86
SIX4-203ENST00000556952 FAM135BQ49AJ0 1406 aa32.9■■■□□ 2.86
SIX4-203ENST00000556952 PLEKHH1Q9ULM0 1364 aa32.89■■■□□ 2.86
SIX4-203ENST00000556952 TOM1O60784 492 aa32.89■■■□□ 2.86
SIX4-203ENST00000556952 ADGRL3Q9HAR2 1447 aa32.89■■■□□ 2.86
SIX4-203ENST00000556952 WAPLQ7Z5K2 1190 aa32.88■■■□□ 2.85
SIX4-203ENST00000556952 SIRT1Q96EB6 747 aa32.88■■■□□ 2.85
SIX4-203ENST00000556952 PRAM1Q96QH2 718 aa32.86■■■□□ 2.85
SIX4-203ENST00000556952 POLR3GLQ9BT43 218 aa32.86■■■□□ 2.85
SIX4-203ENST00000556952 C19orf44Q9H6X5 657 aa32.85■■■□□ 2.85
SIX4-203ENST00000556952 POGKQ9P215 609 aa32.84■■■□□ 2.85
SIX4-203ENST00000556952 PIP4K2BP78356 416 aa32.83■■■□□ 2.85
SIX4-203ENST00000556952 TULP4Q9NRJ4 1543 aa32.83■■■□□ 2.85
SIX4-203ENST00000556952 MYOM1P52179 1685 aa32.83■■■□□ 2.85
SIX4-203ENST00000556952 DCCP43146 1447 aa32.81■■■□□ 2.84
SIX4-203ENST00000556952 SCAF1Q9H7N4 1312 aaKnown RBP32.8■■■□□ 2.84
SIX4-203ENST00000556952 EVC2Q86UK5 1308 aa32.79■■■□□ 2.84
SIX4-203ENST00000556952 CDC42BPGQ6DT37 1551 aa32.77■■■□□ 2.84
SIX4-203ENST00000556952 ROBO1Q9Y6N7 1651 aa32.77■■■□□ 2.84
SIX4-203ENST00000556952 PUS7Q96PZ0 661 aaKnown RBP32.77■■■□□ 2.84
SIX4-203ENST00000556952 ATF3P18847 181 aa32.76■■■□□ 2.84
SIX4-203ENST00000556952 SAFB2Q14151 953 aaKnown RBP eCLIP32.76■■■□□ 2.84
SIX4-203ENST00000556952 CADPS2Q86UW7 1296 aa32.76■■■□□ 2.84
SIX4-203ENST00000556952 ADGRB2O60241 1585 aa32.74■■■□□ 2.83
SIX4-203ENST00000556952 MST1RQ04912 1400 aa32.73■■■□□ 2.83
SIX4-203ENST00000556952 SLAIN2Q9P270 581 aa32.73■■■□□ 2.83
SIX4-203ENST00000556952 MINK1Q8N4C8 1332 aaPredicted RBP32.71■■■□□ 2.83
SIX4-203ENST00000556952 FMN2Q9NZ56 1722 aa32.7■■■□□ 2.83
SIX4-203ENST00000556952 MIER1Q8N108 512 aa32.66■■■□□ 2.82
SIX4-203ENST00000556952 ANP32CO43423 234 aa32.64■■■□□ 2.82
SIX4-203ENST00000556952 ATAD2Q6PL18 1390 aa32.64■■■□□ 2.82
SIX4-203ENST00000556952 C1orf167Q5SNV9 1468 aa32.64■■■□□ 2.82
SIX4-203ENST00000556952 NINLQ9Y2I6 1382 aa32.62■■■□□ 2.81
SIX4-203ENST00000556952 RGPD8O14715 1765 aaPredicted RBP32.62■■■□□ 2.81
SIX4-203ENST00000556952 SRPK2P78362 688 aaKnown RBP32.6■■■□□ 2.81
SIX4-203ENST00000556952 HSPA1LP34931 641 aa32.59■■■□□ 2.81
SIX4-203ENST00000556952 NUTM2FA1L443 756 aa32.58■■■□□ 2.81
SIX4-203ENST00000556952 CDK19Q9BWU1 502 aa32.58■■■□□ 2.81
SIX4-203ENST00000556952 PANK3Q9H999 370 aa32.58■■■□□ 2.81
SIX4-203ENST00000556952 BRINP3Q76B58 766 aa32.58■■■□□ 2.81
SIX4-203ENST00000556952 CABP2Q9NPB3 220 aa32.58■■■□□ 2.81
SIX4-203ENST00000556952 USP32Q8NFA0 1604 aa32.57■■■□□ 2.8
SIX4-203ENST00000556952 WASLO00401 505 aaPredicted RBP32.57■■■□□ 2.8
SIX4-203ENST00000556952 PHLPP1O60346 1717 aa32.56■■■□□ 2.8
SIX4-203ENST00000556952 NHSL1Q5SYE7 1610 aa32.55■■■□□ 2.8
SIX4-203ENST00000556952 ORAI2Q96SN7 254 aa32.53■■■□□ 2.8
SIX4-203ENST00000556952 AHDC1Q5TGY3 1603 aaPredicted RBP32.53■■■□□ 2.8
SIX4-203ENST00000556952 PER1O15534 1290 aaPredicted RBP32.53■■■□□ 2.8
SIX4-203ENST00000556952 TMC1Q8TDI8 760 aa32.5■■■□□ 2.79
SIX4-203ENST00000556952 COL16A1Q07092 1604 aaPredicted RBP32.49■■■□□ 2.79
SIX4-203ENST00000556952 TOPAZ1Q8N9V7 1692 aa32.49■■■□□ 2.79
SIX4-203ENST00000556952 ANKRD36BQ8N2N9 1353 aa32.48■■■□□ 2.79
SIX4-203ENST00000556952 ATP7BP35670 1465 aa32.48■■■□□ 2.79
SIX4-203ENST00000556952 ITSN1Q15811 1721 aa32.47■■■□□ 2.79
SIX4-203ENST00000556952 SLC12A5Q9H2X9 1139 aa32.47■■■□□ 2.79
SIX4-203ENST00000556952 PRKRIP1Q9H875 184 aaPredicted RBP32.47■■■□□ 2.79
SIX4-203ENST00000556952 KTN1Q86UP2 1357 aaKnown RBP32.47■■■□□ 2.79
SIX4-203ENST00000556952 ESCO1Q5FWF5 840 aa32.46■■■□□ 2.79
SIX4-203ENST00000556952 ANKARQ7Z5J8 1434 aa32.46■■■□□ 2.79
SIX4-203ENST00000556952 DDX17Q92841 729 aaKnown RBP32.45■■■□□ 2.79
SIX4-203ENST00000556952 PRR36Q9H6K5 1346 aa32.45■■■□□ 2.79
SIX4-203ENST00000556952 KNSTRNQ9Y448 316 aa32.45■■■□□ 2.78
SIX4-203ENST00000556952 KIF1AQ12756 1690 aa32.44■■■□□ 2.78
SIX4-203ENST00000556952 NPC1L1Q9UHC9 1359 aa32.41■■■□□ 2.78
SIX4-203ENST00000556952 CD163L1Q9NR16 1453 aa32.41■■■□□ 2.78
SIX4-203ENST00000556952 PPIP5K1Q6PFW1 1433 aa32.41■■■□□ 2.78
SIX4-203ENST00000556952 CCER2I3L3R5 266 aa32.41■■■□□ 2.78
SIX4-203ENST00000556952 NUDT16Q96DE0 195 aaKnown RBP32.41■■■□□ 2.78
SIX4-203ENST00000556952 TERF2IPQ9NYB0 399 aa32.39■■■□□ 2.78
SIX4-203ENST00000556952 A0A1W2PP64 1363 aa32.38■■■□□ 2.77
SIX4-203ENST00000556952 CCDC61Q9Y6R9 512 aa32.38■■■□□ 2.77
SIX4-203ENST00000556952 AKAP12Q02952 1782 aa32.38■■■□□ 2.77
SIX4-203ENST00000556952 NSD3Q9BZ95 1437 aa32.38■■■□□ 2.77
SIX4-203ENST00000556952 CARD14Q9BXL6 1004 aa32.36■■■□□ 2.77
SIX4-203ENST00000556952 RALBP1Q15311 655 aa32.36■■■□□ 2.77
SIX4-203ENST00000556952 CABP1Q9NZU7 370 aa32.36■■■□□ 2.77
SIX4-203ENST00000556952 PARD3Q8TEW0 1356 aa32.35■■■□□ 2.77
SIX4-203ENST00000556952 AMER1Q5JTC6 1135 aaPredicted RBP32.35■■■□□ 2.77
SIX4-203ENST00000556952 MON2Q7Z3U7 1717 aa32.34■■■□□ 2.77
SIX4-203ENST00000556952 HDGFL2Q7Z4V5 671 aaPredicted RBP32.34■■■□□ 2.77
SIX4-203ENST00000556952 PHF8Q9UPP1 1060 aa32.34■■■□□ 2.77
SIX4-203ENST00000556952 FOXO3O43524 673 aa32.32■■■□□ 2.77
SIX4-203ENST00000556952 PXDNQ92626 1479 aa32.32■■■□□ 2.76
SIX4-203ENST00000556952 PMFBP1Q8TBY8 1022 aa32.32■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms