RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 SETD5Q9C0A6 1442 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 RUSC2Q8N2Y8 1516 aa7.06□□□□□ -1.28
PCNX1-214ENST00000556849 SLC34A2O95436 690 aa7.06□□□□□ -1.28
PCNX1-214ENST00000556849 SRPK2P78362 688 aaKnown RBP7.06□□□□□ -1.28
PCNX1-214ENST00000556849 HDGFL1Q5TGJ6 251 aa7.06□□□□□ -1.28
PCNX1-214ENST00000556849 FBXO31Q5XUX0 539 aaPredicted RBP7.06□□□□□ -1.28
PCNX1-214ENST00000556849 NDUFB9Q9Y6M9 179 aa7.06□□□□□ -1.28
PCNX1-214ENST00000556849 CENPJQ9HC77 1338 aaPredicted RBP7.05□□□□□ -1.28
PCNX1-214ENST00000556849 PEG3Q9GZU2 1588 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 FHAD1B1AJZ9 1412 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 CFAP70Q5T0N1 1121 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 B4GALNT3Q6L9W6 998 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 SPIRE2Q8WWL2 714 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 BRPF3Q9ULD4 1205 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 RAB3GAP2Q9H2M9 1393 aa7.05□□□□□ -1.28
PCNX1-214ENST00000556849 SYNJ1O43426 1573 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.04□□□□□ -1.28
PCNX1-214ENST00000556849 TSR1Q2NL82 804 aaKnown RBP7.04□□□□□ -1.28
PCNX1-214ENST00000556849 RSBN1LQ6PCB5 846 aaPredicted RBP7.04□□□□□ -1.28
PCNX1-214ENST00000556849 ZNF710Q8N1W2 664 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 RBM46Q8TBY0 533 aaKnown RBP7.04□□□□□ -1.28
PCNX1-214ENST00000556849 RBM33Q96EV2 1170 aaKnown RBP7.04□□□□□ -1.28
PCNX1-214ENST00000556849 PPP1R12CQ9BZL4 782 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 PCDHGA10Q9Y5H3 936 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 ERICH3Q5RHP9 1530 aa7.04□□□□□ -1.28
PCNX1-214ENST00000556849 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.03□□□□□ -1.28
PCNX1-214ENST00000556849 LILRB3O75022 631 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 AP1G2O75843 785 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
PCNX1-214ENST00000556849 PADI6Q6TGC4 694 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 SULF1Q8IWU6 871 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 TTC13Q8NBP0 860 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 VRTNQ9H8Y1 702 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 NCOA2Q15596 1464 aa7.03□□□□□ -1.28
PCNX1-214ENST00000556849 USP17L8P0C7I0 530 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 RFX1P22670 979 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 IRX6P78412 446 aaPredicted RBP7.02□□□□□ -1.29
PCNX1-214ENST00000556849 FAM161AQ3B820 660 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 TMEM92Q6UXU6 159 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 NUTM1Q86Y26 1132 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 NLRP7Q8WX94 980 aa7.02□□□□□ -1.29
PCNX1-214ENST00000556849 GNEQ9Y223 722 aaKnown RBP7.02□□□□□ -1.29
PCNX1-214ENST00000556849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.02□□□□□ -1.29
PCNX1-214ENST00000556849 ARAP1Q96P48 1450 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 ATG7O95352 703 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 CD46P15529 392 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 HSP90AA2PQ14568 343 aaPredicted RBP7.01□□□□□ -1.29
PCNX1-214ENST00000556849 MAMSTRQ6ZN01 415 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 JPH4Q96JJ6 628 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 BACH2Q9BYV9 841 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 METRNQ9UJH8 293 aa7.01□□□□□ -1.29
PCNX1-214ENST00000556849 PLCG2P16885 1265 aa7□□□□□ -1.29
PCNX1-214ENST00000556849 ERCC3P19447 782 aa7□□□□□ -1.29
PCNX1-214ENST00000556849 SOX11P35716 441 aa7□□□□□ -1.29
PCNX1-214ENST00000556849 NFKBIBQ15653 356 aa7□□□□□ -1.29
PCNX1-214ENST00000556849 ADAMTS19Q8TE59 1207 aa7□□□□□ -1.29
PCNX1-214ENST00000556849 GJD4Q96KN9 370 aaPredicted RBP7□□□□□ -1.29
PCNX1-214ENST00000556849 PALM3A6NDB9 673 aaPredicted RBP6.99□□□□□ -1.29
PCNX1-214ENST00000556849 HSP90B1P14625 803 aaKnown RBP6.99□□□□□ -1.29
PCNX1-214ENST00000556849 L1TD1Q5T7N2 865 aaKnown RBP6.99□□□□□ -1.29
PCNX1-214ENST00000556849 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
PCNX1-214ENST00000556849 FRAT1Q92837 279 aaPredicted RBP6.99□□□□□ -1.29
PCNX1-214ENST00000556849 NUDCQ9Y266 331 aa6.99□□□□□ -1.29
PCNX1-214ENST00000556849 CNTLNQ9NXG0 1405 aa6.99□□□□□ -1.29
PCNX1-214ENST00000556849 RBM47A0AV96 593 aaKnown RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 NUTM2BA6NNL0 878 aaPredicted RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 NUTM2EB1AL46 878 aaPredicted RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 HSP90AA1P07900 732 aaKnown RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 CALD1Q05682 793 aaKnown RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 MMRN1Q13201 1228 aa6.98□□□□□ -1.29
PCNX1-214ENST00000556849 QPCTQ16769 361 aa6.98□□□□□ -1.29
PCNX1-214ENST00000556849 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 NUTM2AQ8IVF1 878 aaPredicted RBP6.98□□□□□ -1.29
PCNX1-214ENST00000556849 ALG2Q9H553 416 aa6.98□□□□□ -1.29
PCNX1-214ENST00000556849 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
PCNX1-214ENST00000556849 MOXD2PA6NHM9 499 aa6.97□□□□□ -1.29
PCNX1-214ENST00000556849 TMEM88BA6NKF7 163 aa6.97□□□□□ -1.29
PCNX1-214ENST00000556849 LMOD1P29536 600 aaPredicted RBP6.97□□□□□ -1.29
PCNX1-214ENST00000556849 CSPP1Q1MSJ5 1256 aa6.97□□□□□ -1.29
PCNX1-214ENST00000556849 C6orf132Q5T0Z8 1188 aa6.97□□□□□ -1.29
PCNX1-214ENST00000556849 ATN1P54259 1190 aaPredicted RBP6.96□□□□□ -1.3
PCNX1-214ENST00000556849 PRSS12P56730 875 aa6.96□□□□□ -1.3
PCNX1-214ENST00000556849 KANK4Q5T7N3 995 aaPredicted RBP6.96□□□□□ -1.3
PCNX1-214ENST00000556849 PUS7Q96PZ0 661 aaKnown RBP6.96□□□□□ -1.3
PCNX1-214ENST00000556849 ZBTB3Q9H5J0 574 aa6.96□□□□□ -1.3
PCNX1-214ENST00000556849 LAS1LQ9Y4W2 734 aaKnown RBP6.96□□□□□ -1.3
PCNX1-214ENST00000556849 PRXQ9BXM0 1461 aa6.96□□□□□ -1.3
PCNX1-214ENST00000556849 AAMPQ13685 434 aa6.95□□□□□ -1.3
PCNX1-214ENST00000556849 PDCL3Q9H2J4 239 aa6.95□□□□□ -1.3
PCNX1-214ENST00000556849 PRKRIP1Q9H875 184 aaPredicted RBP6.95□□□□□ -1.3
PCNX1-214ENST00000556849 RCCD1A6NED2 376 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 TPM2P07951 284 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 USP46P62068 366 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 FGD1P98174 961 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 ELOAQ14241 798 aaKnown RBP6.94□□□□□ -1.3
PCNX1-214ENST00000556849 SCUBE2Q9NQ36 999 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 IGSF5Q9NSI5 407 aa6.94□□□□□ -1.3
PCNX1-214ENST00000556849 TFIP11Q9UBB9 837 aaKnown RBP6.94□□□□□ -1.3
PCNX1-214ENST00000556849 PCDHB15Q9Y5E8 787 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms