RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 TRIM66O15016 1216 aa11.56□□□□□ -0.56
HIF1A-209ENST00000556827 USB1Q9BQ65 265 aaKnown RBP11.56□□□□□ -0.56
HIF1A-209ENST00000556827 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
HIF1A-209ENST00000556827 ZNF598Q86UK7 904 aaKnown RBP11.55□□□□□ -0.56
HIF1A-209ENST00000556827 PARP9Q8IXQ6 854 aa11.55□□□□□ -0.56
HIF1A-209ENST00000556827 BEGAINQ9BUH8 593 aa11.52□□□□□ -0.57
HIF1A-209ENST00000556827 FDX1P10109 184 aa11.51□□□□□ -0.57
HIF1A-209ENST00000556827 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
HIF1A-209ENST00000556827 SLC24A3Q9HC58 644 aa11.51□□□□□ -0.57
HIF1A-209ENST00000556827 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
HIF1A-209ENST00000556827 RPIAP49247 311 aa11.49□□□□□ -0.57
HIF1A-209ENST00000556827 MMP16P51512 607 aa11.49□□□□□ -0.57
HIF1A-209ENST00000556827 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
HIF1A-209ENST00000556827 SYMPKQ92797 1274 aaKnown RBP11.49□□□□□ -0.57
HIF1A-209ENST00000556827 C6orf229H3BNL8 230 aa11.48□□□□□ -0.57
HIF1A-209ENST00000556827 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
HIF1A-209ENST00000556827 MOXD2PA6NHM9 499 aa11.47□□□□□ -0.57
HIF1A-209ENST00000556827 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
HIF1A-209ENST00000556827 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
HIF1A-209ENST00000556827 PDE4DQ08499 809 aa11.47□□□□□ -0.57
HIF1A-209ENST00000556827 MS4A1P11836 297 aa11.46□□□□□ -0.57
HIF1A-209ENST00000556827 NDUFV2P19404 249 aa11.46□□□□□ -0.57
HIF1A-209ENST00000556827 FOXC1Q12948 553 aa11.46□□□□□ -0.57
HIF1A-209ENST00000556827 RETREG3Q86VR2 466 aa11.46□□□□□ -0.57
HIF1A-209ENST00000556827 PCDHGC3Q9UN70 934 aa11.46□□□□□ -0.57
HIF1A-209ENST00000556827 PRR20EP86478 221 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 PRR20CP86479 221 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 PRR20DP86480 221 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 PRR20BP86481 221 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 PRR20AP86496 221 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
HIF1A-209ENST00000556827 JUNDP17535 347 aa11.44□□□□□ -0.58
HIF1A-209ENST00000556827 DIXDC1Q155Q3 683 aa11.44□□□□□ -0.58
HIF1A-209ENST00000556827 TRAF7Q6Q0C0 670 aa11.44□□□□□ -0.58
HIF1A-209ENST00000556827 TBC1D2Q9BYX2 928 aa11.44□□□□□ -0.58
HIF1A-209ENST00000556827 GDF9O60383 454 aa11.42□□□□□ -0.58
HIF1A-209ENST00000556827 PKDCCQ504Y2 493 aa11.41□□□□□ -0.58
HIF1A-209ENST00000556827 TRIM32Q13049 653 aa11.4□□□□□ -0.58
HIF1A-209ENST00000556827 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
HIF1A-209ENST00000556827 FAM187AA6NFU0 413 aa11.39□□□□□ -0.59
HIF1A-209ENST00000556827 MTMR2Q13614 643 aa11.39□□□□□ -0.59
HIF1A-209ENST00000556827 LCE2BO14633 110 aa11.38□□□□□ -0.59
HIF1A-209ENST00000556827 RSBN1LQ6PCB5 846 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-209ENST00000556827 NUDT12Q9BQG2 462 aa11.38□□□□□ -0.59
HIF1A-209ENST00000556827 SPDYE5A6NIY4 337 aa11.37□□□□□ -0.59
HIF1A-209ENST00000556827 GJA5P36382 358 aa11.37□□□□□ -0.59
HIF1A-209ENST00000556827 DGAT1O75907 488 aa11.36□□□□□ -0.59
HIF1A-209ENST00000556827 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
HIF1A-209ENST00000556827 CYP4X1Q8N118 509 aa11.35□□□□□ -0.59
HIF1A-209ENST00000556827 SPTLC1O15269 473 aa11.34□□□□□ -0.59
HIF1A-209ENST00000556827 CSPP1Q1MSJ5 1256 aa11.34□□□□□ -0.59
HIF1A-209ENST00000556827 RIC3Q7Z5B4 369 aa11.34□□□□□ -0.59
HIF1A-209ENST00000556827 CCNYL3P0C7X3 344 aa11.33□□□□□ -0.6
HIF1A-209ENST00000556827 ZBTB3Q9H5J0 574 aa11.33□□□□□ -0.6
HIF1A-209ENST00000556827 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
HIF1A-209ENST00000556827 WNT7AO00755 349 aa11.32□□□□□ -0.6
HIF1A-209ENST00000556827 PTPRNQ16849 979 aa11.32□□□□□ -0.6
HIF1A-209ENST00000556827 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
HIF1A-209ENST00000556827 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
HIF1A-209ENST00000556827 NISCHQ9Y2I1 1504 aa11.3□□□□□ -0.6
HIF1A-209ENST00000556827 HRCP23327 699 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 WNT7BP56706 349 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 MYT1Q01538 1121 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 DESI1Q6ICB0 168 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 CABLES1Q8TDN4 633 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 TOR4AQ9NXH8 423 aa11.29□□□□□ -0.6
HIF1A-209ENST00000556827 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
HIF1A-209ENST00000556827 PTCRAQ6ISU1 281 aaPredicted RBP11.28□□□□□ -0.6
HIF1A-209ENST00000556827 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
HIF1A-209ENST00000556827 LIMD1Q9UGP4 676 aa11.28□□□□□ -0.6
HIF1A-209ENST00000556827 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
HIF1A-209ENST00000556827 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
HIF1A-209ENST00000556827 CFAP99D6REC4 459 aa11.27□□□□□ -0.61
HIF1A-209ENST00000556827 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
HIF1A-209ENST00000556827 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
HIF1A-209ENST00000556827 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
HIF1A-209ENST00000556827 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
HIF1A-209ENST00000556827 SKOR1P84550 965 aa11.26□□□□□ -0.61
HIF1A-209ENST00000556827 RC3H1Q5TC82 1133 aaKnown RBP11.26□□□□□ -0.61
HIF1A-209ENST00000556827 TSC1Q92574 1164 aa11.26□□□□□ -0.61
HIF1A-209ENST00000556827 CLK2P49760 499 aaKnown RBP11.25□□□□□ -0.61
HIF1A-209ENST00000556827 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
HIF1A-209ENST00000556827 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
HIF1A-209ENST00000556827 EVA1BQ9NVM1 165 aa11.25□□□□□ -0.61
HIF1A-209ENST00000556827 CTHP32929 405 aa11.24□□□□□ -0.61
HIF1A-209ENST00000556827 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
HIF1A-209ENST00000556827 QPCTQ16769 361 aa11.24□□□□□ -0.61
HIF1A-209ENST00000556827 UNC93B1Q9H1C4 597 aa11.24□□□□□ -0.61
HIF1A-209ENST00000556827 POLR3EQ9NVU0 708 aa11.24□□□□□ -0.61
HIF1A-209ENST00000556827 ST8SIA5O15466 376 aa11.23□□□□□ -0.61
HIF1A-209ENST00000556827 EHBP1Q8NDI1 1231 aa11.23□□□□□ -0.61
HIF1A-209ENST00000556827 TUSC1Q2TAM9 212 aa11.22□□□□□ -0.61
HIF1A-209ENST00000556827 LINC01559Q495D7 138 aa11.22□□□□□ -0.61
HIF1A-209ENST00000556827 ZNF787Q6DD87 383 aa11.22□□□□□ -0.61
HIF1A-209ENST00000556827 LYPD8Q6UX82 237 aa11.22□□□□□ -0.61
HIF1A-209ENST00000556827 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
HIF1A-209ENST00000556827 AAASQ9NRG9 546 aa11.2□□□□□ -0.62
HIF1A-209ENST00000556827 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-209ENST00000556827 J3QL48 77 aa11.19□□□□□ -0.62
HIF1A-209ENST00000556827 LILRB3O75022 631 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms