RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PRR20BP86481 221 aa9.31□□□□□ -0.92
ATXN3-243ENST00000556671 PRR20AP86496 221 aa9.31□□□□□ -0.92
ATXN3-243ENST00000556671 TRAF7Q6Q0C0 670 aa9.31□□□□□ -0.92
ATXN3-243ENST00000556671 SSTR3P32745 418 aaPredicted RBP9.3□□□□□ -0.92
ATXN3-243ENST00000556671 GDF9O60383 454 aa9.29□□□□□ -0.92
ATXN3-243ENST00000556671 RPIAP49247 311 aa9.29□□□□□ -0.92
ATXN3-243ENST00000556671 MMP16P51512 607 aa9.29□□□□□ -0.92
ATXN3-243ENST00000556671 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
ATXN3-243ENST00000556671 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
ATXN3-243ENST00000556671 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
ATXN3-243ENST00000556671 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
ATXN3-243ENST00000556671 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
ATXN3-243ENST00000556671 TNFRSF10AO00220 468 aa9.25□□□□□ -0.93
ATXN3-243ENST00000556671 TRIM66O15016 1216 aa9.25□□□□□ -0.93
ATXN3-243ENST00000556671 DXOO77932 396 aaKnown RBP9.25□□□□□ -0.93
ATXN3-243ENST00000556671 CD2BP2O95400 341 aaKnown RBP9.24□□□□□ -0.93
ATXN3-243ENST00000556671 SPIRE2Q8WWL2 714 aa9.24□□□□□ -0.93
ATXN3-243ENST00000556671 AK7Q96M32 723 aa9.24□□□□□ -0.93
ATXN3-243ENST00000556671 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
ATXN3-243ENST00000556671 PARP9Q8IXQ6 854 aa9.23□□□□□ -0.93
ATXN3-243ENST00000556671 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-243ENST00000556671 DGAT1O75907 488 aa9.22□□□□□ -0.93
ATXN3-243ENST00000556671 FDX1P10109 184 aa9.22□□□□□ -0.93
ATXN3-243ENST00000556671 SYMPKQ92797 1274 aaKnown RBP9.22□□□□□ -0.93
ATXN3-243ENST00000556671 PCDHGC3Q9UN70 934 aa9.22□□□□□ -0.93
ATXN3-243ENST00000556671 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
ATXN3-243ENST00000556671 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
ATXN3-243ENST00000556671 FOXC1Q12948 553 aa9.2□□□□□ -0.94
ATXN3-243ENST00000556671 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
ATXN3-243ENST00000556671 MOXD2PA6NHM9 499 aa9.19□□□□□ -0.94
ATXN3-243ENST00000556671 JUNDP17535 347 aa9.19□□□□□ -0.94
ATXN3-243ENST00000556671 NDUFV2P19404 249 aa9.19□□□□□ -0.94
ATXN3-243ENST00000556671 FAM187AA6NFU0 413 aa9.18□□□□□ -0.94
ATXN3-243ENST00000556671 MS4A1P11836 297 aa9.18□□□□□ -0.94
ATXN3-243ENST00000556671 TRIM32Q13049 653 aa9.18□□□□□ -0.94
ATXN3-243ENST00000556671 RB1CC1Q8TDY2 1594 aa9.17□□□□□ -0.94
ATXN3-243ENST00000556671 C6orf229H3BNL8 230 aa9.17□□□□□ -0.94
ATXN3-243ENST00000556671 MYT1Q01538 1121 aa9.17□□□□□ -0.94
ATXN3-243ENST00000556671 PDE4DQ08499 809 aa9.16□□□□□ -0.94
ATXN3-243ENST00000556671 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
ATXN3-243ENST00000556671 TBC1D2Q9BYX2 928 aa9.16□□□□□ -0.94
ATXN3-243ENST00000556671 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
ATXN3-243ENST00000556671 TOR4AQ9NXH8 423 aa9.16□□□□□ -0.94
ATXN3-243ENST00000556671 GJA5P36382 358 aa9.15□□□□□ -0.94
ATXN3-243ENST00000556671 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
ATXN3-243ENST00000556671 WNT7AO00755 349 aa9.14□□□□□ -0.95
ATXN3-243ENST00000556671 RSBN1LQ6PCB5 846 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-243ENST00000556671 CYP4X1Q8N118 509 aa9.13□□□□□ -0.95
ATXN3-243ENST00000556671 NUDT12Q9BQG2 462 aa9.13□□□□□ -0.95
ATXN3-243ENST00000556671 MTMR2Q13614 643 aa9.12□□□□□ -0.95
ATXN3-243ENST00000556671 NACADO15069 1562 aa9.12□□□□□ -0.95
ATXN3-243ENST00000556671 SPDYE5A6NIY4 337 aa9.11□□□□□ -0.95
ATXN3-243ENST00000556671 SPTLC1O15269 473 aa9.11□□□□□ -0.95
ATXN3-243ENST00000556671 PRR7Q8TB68 274 aa9.11□□□□□ -0.95
ATXN3-243ENST00000556671 AVPP01185 164 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 WNT7BP56706 349 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 SKOR1P84550 965 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 PTPRNQ16849 979 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 ZNF787Q6DD87 383 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-243ENST00000556671 MRGPRX2Q96LB1 330 aa9.1□□□□□ -0.95
ATXN3-243ENST00000556671 CCNYL3P0C7X3 344 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 DESI1Q6ICB0 168 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 BCANQ96GW7 911 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 AAASQ9NRG9 546 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 PCDHB15Q9Y5E8 787 aa9.09□□□□□ -0.95
ATXN3-243ENST00000556671 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-243ENST00000556671 SLC24A1O60721 1099 aa9.08□□□□□ -0.96
ATXN3-243ENST00000556671 RC3H1Q5TC82 1133 aaKnown RBP9.08□□□□□ -0.96
ATXN3-243ENST00000556671 SNIP1Q8TAD8 396 aaKnown RBP9.08□□□□□ -0.96
ATXN3-243ENST00000556671 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
ATXN3-243ENST00000556671 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
ATXN3-243ENST00000556671 EVA1BQ9NVM1 165 aa9.07□□□□□ -0.96
ATXN3-243ENST00000556671 UNC13AQ9UPW8 1703 aa9.07□□□□□ -0.96
ATXN3-243ENST00000556671 SMPD1P17405 629 aa9.06□□□□□ -0.96
ATXN3-243ENST00000556671 HRCP23327 699 aa9.06□□□□□ -0.96
ATXN3-243ENST00000556671 PRPF38BQ5VTL8 546 aaKnown RBP9.06□□□□□ -0.96
ATXN3-243ENST00000556671 ZBTB3Q9H5J0 574 aa9.06□□□□□ -0.96
ATXN3-243ENST00000556671 MYSM1Q5VVJ2 828 aa9.05□□□□□ -0.96
ATXN3-243ENST00000556671 CFAP99D6REC4 459 aa9.04□□□□□ -0.96
ATXN3-243ENST00000556671 SMCPP49901 116 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-243ENST00000556671 KCNH2Q12809 1159 aa9.04□□□□□ -0.96
ATXN3-243ENST00000556671 CTC1Q2NKJ3 1217 aa9.04□□□□□ -0.96
ATXN3-243ENST00000556671 UNC93B1Q9H1C4 597 aa9.04□□□□□ -0.96
ATXN3-243ENST00000556671 LIMD1Q9UGP4 676 aa9.04□□□□□ -0.96
ATXN3-243ENST00000556671 ZCCHC6Q5VYS8 1495 aaKnown RBP9.03□□□□□ -0.96
ATXN3-243ENST00000556671 POTECB2RU33 542 aa9.03□□□□□ -0.96
ATXN3-243ENST00000556671 J3QL48 77 aa9.03□□□□□ -0.96
ATXN3-243ENST00000556671 TUSC1Q2TAM9 212 aa9.03□□□□□ -0.96
ATXN3-243ENST00000556671 LYPD8Q6UX82 237 aa9.03□□□□□ -0.96
ATXN3-243ENST00000556671 AXIN1O15169 862 aa9.02□□□□□ -0.97
ATXN3-243ENST00000556671 SH3BP2P78314 561 aa9.02□□□□□ -0.97
ATXN3-243ENST00000556671 CABLES1Q8TDN4 633 aa9.02□□□□□ -0.97
ATXN3-243ENST00000556671 CSPP1Q1MSJ5 1256 aa9.01□□□□□ -0.97
ATXN3-243ENST00000556671 DACH1Q9UI36 760 aa9.01□□□□□ -0.97
ATXN3-243ENST00000556671 SIAH2O43255 324 aa9□□□□□ -0.97
ATXN3-243ENST00000556671 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
ATXN3-243ENST00000556671 LILRB3O75022 631 aa8.99□□□□□ -0.97
ATXN3-243ENST00000556671 F12P00748 615 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms