RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 NWD1Q149M9 1564 aa11.55□□□□□ -0.56
HNRNPC-226ENST00000556628 ZNF326Q5BKZ1 582 aaKnown RBP11.55□□□□□ -0.56
HNRNPC-226ENST00000556628 MIER1Q8N108 512 aa11.55□□□□□ -0.56
HNRNPC-226ENST00000556628 SLC39A7Q92504 469 aa11.55□□□□□ -0.56
HNRNPC-226ENST00000556628 NUTM2DQ5VT03 806 aaPredicted RBP11.54□□□□□ -0.56
HNRNPC-226ENST00000556628 METRNQ9UJH8 293 aa11.54□□□□□ -0.56
HNRNPC-226ENST00000556628 TBX22Q9Y458 520 aa11.54□□□□□ -0.56
HNRNPC-226ENST00000556628 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
HNRNPC-226ENST00000556628 MSH6P52701 1360 aa11.54□□□□□ -0.56
HNRNPC-226ENST00000556628 KIF1BO60333 1816 aa11.53□□□□□ -0.56
HNRNPC-226ENST00000556628 HFM1A2PYH4 1435 aa11.53□□□□□ -0.56
HNRNPC-226ENST00000556628 C7P10643 843 aa11.53□□□□□ -0.56
HNRNPC-226ENST00000556628 TRPM2O94759 1503 aa11.51□□□□□ -0.57
HNRNPC-226ENST00000556628 RBM33Q96EV2 1170 aaKnown RBP11.51□□□□□ -0.57
HNRNPC-226ENST00000556628 PIK3R4Q99570 1358 aa11.51□□□□□ -0.57
HNRNPC-226ENST00000556628 MED1Q15648 1581 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 CLTCL1P53675 1640 aa11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 ILDR2Q71H61 639 aa11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 KIF12Q96FN5 646 aa11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 ADAMTS13Q76LX8 1427 aa11.5□□□□□ -0.57
HNRNPC-226ENST00000556628 FAM135BQ49AJ0 1406 aa11.49□□□□□ -0.57
HNRNPC-226ENST00000556628 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
HNRNPC-226ENST00000556628 ROBO1Q9Y6N7 1651 aa11.48□□□□□ -0.57
HNRNPC-226ENST00000556628 SETBP1Q9Y6X0 1596 aa11.47□□□□□ -0.57
HNRNPC-226ENST00000556628 AMOTL2Q9Y2J4 779 aa11.47□□□□□ -0.57
HNRNPC-226ENST00000556628 ACIN1Q9UKV3 1341 aaKnown RBP11.46□□□□□ -0.57
HNRNPC-226ENST00000556628 SLAIN2Q9P270 581 aa11.46□□□□□ -0.57
HNRNPC-226ENST00000556628 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 SOCS7O14512 581 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 VGFO15240 615 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 ATF3P18847 181 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 ATN1P54259 1190 aaPredicted RBP11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 CADPS2Q86UW7 1296 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 C19orf44Q9H6X5 657 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 NRXN3Q9Y4C0 1643 aa11.45□□□□□ -0.58
HNRNPC-226ENST00000556628 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.44□□□□□ -0.58
HNRNPC-226ENST00000556628 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
HNRNPC-226ENST00000556628 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
HNRNPC-226ENST00000556628 PLCD3Q8N3E9 789 aa11.44□□□□□ -0.58
HNRNPC-226ENST00000556628 PHLPP1O60346 1717 aa11.43□□□□□ -0.58
HNRNPC-226ENST00000556628 RPGRIP1LQ68CZ1 1315 aa11.43□□□□□ -0.58
HNRNPC-226ENST00000556628 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
HNRNPC-226ENST00000556628 MAP3K13O43283 966 aa11.42□□□□□ -0.58
HNRNPC-226ENST00000556628 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
HNRNPC-226ENST00000556628 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
HNRNPC-226ENST00000556628 CCDC144AA2RUR9 1427 aa11.42□□□□□ -0.58
HNRNPC-226ENST00000556628 PPLO60437 1756 aa11.41□□□□□ -0.58
HNRNPC-226ENST00000556628 PLSCR2Q9NRY7 297 aa11.41□□□□□ -0.58
HNRNPC-226ENST00000556628 BMP2KQ9NSY1 1161 aaPredicted RBP11.41□□□□□ -0.58
HNRNPC-226ENST00000556628 METP08581 1390 aa11.41□□□□□ -0.58
HNRNPC-226ENST00000556628 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
HNRNPC-226ENST00000556628 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.58
HNRNPC-226ENST00000556628 DCCP43146 1447 aa11.4□□□□□ -0.58
HNRNPC-226ENST00000556628 SETD5Q9C0A6 1442 aa11.4□□□□□ -0.58
HNRNPC-226ENST00000556628 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
HNRNPC-226ENST00000556628 TIE1P35590 1138 aa11.39□□□□□ -0.59
HNRNPC-226ENST00000556628 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
HNRNPC-226ENST00000556628 TRPC6Q9Y210 931 aa11.38□□□□□ -0.59
HNRNPC-226ENST00000556628 JCADQ9P266 1359 aa11.38□□□□□ -0.59
HNRNPC-226ENST00000556628 POTEMA6NI47 508 aa11.37□□□□□ -0.59
HNRNPC-226ENST00000556628 RGL3Q3MIN7 710 aa11.37□□□□□ -0.59
HNRNPC-226ENST00000556628 SETD1AO15047 1707 aaKnown RBP11.36□□□□□ -0.59
HNRNPC-226ENST00000556628 SCUBE2Q9NQ36 999 aa11.36□□□□□ -0.59
HNRNPC-226ENST00000556628 ADGRL3Q9HAR2 1447 aa11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 COL16A1Q07092 1604 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 NALCNQ8IZF0 1738 aa11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 ANKRD30BQ9BXX2 1392 aa11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
HNRNPC-226ENST00000556628 RAB3GAP2Q9H2M9 1393 aa11.34□□□□□ -0.59
HNRNPC-226ENST00000556628 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-226ENST00000556628 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
HNRNPC-226ENST00000556628 POTEGQ6S5H5 508 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 ASXL1Q8IXJ9 1541 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 MST1RQ04912 1400 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 SPATA31E1Q6ZUB1 1445 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 SHPRHQ149N8 1683 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 SPATA31A6Q5VVP1 1343 aa11.33□□□□□ -0.6
HNRNPC-226ENST00000556628 MEX3CQ5U5Q3 659 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-226ENST00000556628 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
HNRNPC-226ENST00000556628 NHSL1Q5SYE7 1610 aa11.31□□□□□ -0.6
HNRNPC-226ENST00000556628 ROBO2Q9HCK4 1378 aa11.31□□□□□ -0.6
HNRNPC-226ENST00000556628 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
HNRNPC-226ENST00000556628 NUBP1P53384 320 aa11.31□□□□□ -0.6
HNRNPC-226ENST00000556628 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
HNRNPC-226ENST00000556628 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
HNRNPC-226ENST00000556628 VASPP50552 380 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-226ENST00000556628 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-226ENST00000556628 RGS17Q9UGC6 210 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-226ENST00000556628 PCDHB13Q9Y5F0 798 aa11.3□□□□□ -0.6
HNRNPC-226ENST00000556628 STK26Q9P289 416 aa11.29□□□□□ -0.6
HNRNPC-226ENST00000556628 C1orf167Q5SNV9 1468 aa11.28□□□□□ -0.6
HNRNPC-226ENST00000556628 SEC24BO95487 1268 aa11.28□□□□□ -0.6
HNRNPC-226ENST00000556628 KNDC1Q76NI1 1749 aa11.28□□□□□ -0.6
HNRNPC-226ENST00000556628 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-226ENST00000556628 LAMC1P11047 1609 aa11.27□□□□□ -0.6
HNRNPC-226ENST00000556628 PIK3C2GO75747 1445 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms