RNA–Protein interactions for RNA: ENST00000556618.1

RCCD1-206, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RCCD1, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-206ENST00000556618 SAFB2Q14151 953 aaKnown RBP eCLIP34.15■■■■□ 3.06
RCCD1-206ENST00000556618 CENPJQ9HC77 1338 aaPredicted RBP34.08■■■■□ 3.05
RCCD1-206ENST00000556618 EIF3AQ14152 1382 aaKnown RBP34.08■■■■□ 3.05
RCCD1-206ENST00000556618 DCCP43146 1447 aa34.06■■■■□ 3.04
RCCD1-206ENST00000556618 ATF3P18847 181 aa34.05■■■■□ 3.04
RCCD1-206ENST00000556618 MINK1Q8N4C8 1332 aaPredicted RBP34.04■■■■□ 3.04
RCCD1-206ENST00000556618 QRICH2Q9H0J4 1663 aa34.04■■■■□ 3.04
RCCD1-206ENST00000556618 UBAP1LF5GYI3 381 aa34.03■■■■□ 3.04
RCCD1-206ENST00000556618 CADPS2Q86UW7 1296 aa34.03■■■■□ 3.04
RCCD1-206ENST00000556618 TOM1O60784 492 aa34.02■■■■□ 3.04
RCCD1-206ENST00000556618 CDC42BPGQ6DT37 1551 aa34.02■■■■□ 3.04
RCCD1-206ENST00000556618 HIRIP3Q9BW71 556 aaPredicted RBP34.01■■■■□ 3.03
RCCD1-206ENST00000556618 ADGRB2O60241 1585 aa34.01■■■■□ 3.03
RCCD1-206ENST00000556618 USP47Q96K76 1375 aa34■■■■□ 3.03
RCCD1-206ENST00000556618 SLAIN2Q9P270 581 aa33.96■■■■□ 3.03
RCCD1-206ENST00000556618 ST20-MTHFSA0A0A6YYL1 179 aa33.95■■■■□ 3.03
RCCD1-206ENST00000556618 FMN2Q9NZ56 1722 aa33.94■■■■□ 3.02
RCCD1-206ENST00000556618 ZEB1P37275 1124 aaPredicted RBP33.94■■■■□ 3.02
RCCD1-206ENST00000556618 MST1RQ04912 1400 aa33.93■■■■□ 3.02
RCCD1-206ENST00000556618 WASLO00401 505 aaPredicted RBP33.93■■■■□ 3.02
RCCD1-206ENST00000556618 SBNO2Q9Y2G9 1366 aa33.91■■■■□ 3.02
RCCD1-206ENST00000556618 EIF4G2P78344 907 aaKnown RBP eCLIP33.88■■■■□ 3.01
RCCD1-206ENST00000556618 PIP4K2BP78356 416 aa33.88■■■■□ 3.01
RCCD1-206ENST00000556618 CDK19Q9BWU1 502 aa33.88■■■■□ 3.01
RCCD1-206ENST00000556618 RGPD8O14715 1765 aaPredicted RBP33.87■■■■□ 3.01
RCCD1-206ENST00000556618 NUTM2FA1L443 756 aa33.87■■■■□ 3.01
RCCD1-206ENST00000556618 FBXO41Q8TF61 875 aa33.87■■■■□ 3.01
RCCD1-206ENST00000556618 TESK2Q96S53 571 aa33.87■■■■□ 3.01
RCCD1-206ENST00000556618 C1orf167Q5SNV9 1468 aa33.87■■■■□ 3.01
RCCD1-206ENST00000556618 TULP4Q9NRJ4 1543 aa33.85■■■■□ 3.01
RCCD1-206ENST00000556618 EVC2Q86UK5 1308 aa33.84■■■■□ 3.01
RCCD1-206ENST00000556618 SCAF1Q9H7N4 1312 aaKnown RBP33.84■■■■□ 3.01
RCCD1-206ENST00000556618 HSPA5P11021 654 aaKnown RBP33.84■■■■□ 3.01
RCCD1-206ENST00000556618 USP32Q8NFA0 1604 aa33.82■■■■□ 3
RCCD1-206ENST00000556618 ROBO1Q9Y6N7 1651 aa33.82■■■■□ 3
RCCD1-206ENST00000556618 ANKARQ7Z5J8 1434 aa33.81■■■■□ 3
RCCD1-206ENST00000556618 SLC24A1O60721 1099 aa33.8■■■■□ 3
RCCD1-206ENST00000556618 ORAI2Q96SN7 254 aa33.79■■■■□ 3
RCCD1-206ENST00000556618 PRR36Q9H6K5 1346 aa33.78■■■■□ 3
RCCD1-206ENST00000556618 SRPK2P78362 688 aaKnown RBP33.78■■■■□ 3
RCCD1-206ENST00000556618 BRINP3Q76B58 766 aa33.78■■■■□ 3
RCCD1-206ENST00000556618 CABP2Q9NPB3 220 aa33.77■■■■□ 3
RCCD1-206ENST00000556618 ESCO1Q5FWF5 840 aa33.77■■■■□ 3
RCCD1-206ENST00000556618 NUDT16Q96DE0 195 aaKnown RBP33.77■■■■□ 3
RCCD1-206ENST00000556618 ATP7BP35670 1465 aa33.75■■■□□ 2.99
RCCD1-206ENST00000556618 TMF1P82094 1093 aa33.72■■■□□ 2.99
RCCD1-206ENST00000556618 ITSN1Q15811 1721 aa33.72■■■□□ 2.99
RCCD1-206ENST00000556618 DISP3Q9P2K9 1392 aa33.7■■■□□ 2.98
RCCD1-206ENST00000556618 CCDC61Q9Y6R9 512 aa33.69■■■□□ 2.98
RCCD1-206ENST00000556618 TOPAZ1Q8N9V7 1692 aa33.69■■■□□ 2.98
RCCD1-206ENST00000556618 PHF8Q9UPP1 1060 aa33.68■■■□□ 2.98
RCCD1-206ENST00000556618 KIF1AQ12756 1690 aa33.68■■■□□ 2.98
RCCD1-206ENST00000556618 PUS7Q96PZ0 661 aaKnown RBP33.67■■■□□ 2.98
RCCD1-206ENST00000556618 NHSL1Q5SYE7 1610 aa33.64■■■□□ 2.98
RCCD1-206ENST00000556618 PMFBP1Q8TBY8 1022 aa33.64■■■□□ 2.98
RCCD1-206ENST00000556618 ATAD2Q6PL18 1390 aa33.64■■■□□ 2.98
RCCD1-206ENST00000556618 FOXO3O43524 673 aa33.62■■■□□ 2.97
RCCD1-206ENST00000556618 DDX17Q92841 729 aaKnown RBP33.62■■■□□ 2.97
RCCD1-206ENST00000556618 AHDC1Q5TGY3 1603 aaPredicted RBP33.62■■■□□ 2.97
RCCD1-206ENST00000556618 PPIP5K1Q6PFW1 1433 aa33.62■■■□□ 2.97
RCCD1-206ENST00000556618 PLEKHG3A1L390 1219 aa33.61■■■□□ 2.97
RCCD1-206ENST00000556618 CDCA8Q53HL2 280 aa33.61■■■□□ 2.97
RCCD1-206ENST00000556618 PHLPP1O60346 1717 aa33.6■■■□□ 2.97
RCCD1-206ENST00000556618 CABP1Q9NZU7 370 aa33.6■■■□□ 2.97
RCCD1-206ENST00000556618 HSPA1LP34931 641 aa33.59■■■□□ 2.97
RCCD1-206ENST00000556618 NPHP3Q7Z494 1330 aa33.57■■■□□ 2.97
RCCD1-206ENST00000556618 ILDR1Q86SU0 546 aaPredicted RBP33.56■■■□□ 2.96
RCCD1-206ENST00000556618 NGDNQ8NEJ9 315 aaKnown RBP33.56■■■□□ 2.96
RCCD1-206ENST00000556618 ACEP12821 1306 aa33.54■■■□□ 2.96
RCCD1-206ENST00000556618 POLR3AO14802 1390 aaPredicted RBP33.54■■■□□ 2.96
RCCD1-206ENST00000556618 C11orf95C9JLR9 678 aaPredicted RBP33.54■■■□□ 2.96
RCCD1-206ENST00000556618 SOS2Q07890 1332 aaPredicted RBP33.53■■■□□ 2.96
RCCD1-206ENST00000556618 COL16A1Q07092 1604 aaPredicted RBP33.52■■■□□ 2.96
RCCD1-206ENST00000556618 TMC1Q8TDI8 760 aa33.52■■■□□ 2.96
RCCD1-206ENST00000556618 XPCQ01831 940 aaPredicted RBP33.51■■■□□ 2.96
RCCD1-206ENST00000556618 PSME1Q06323 249 aa33.51■■■□□ 2.96
RCCD1-206ENST00000556618 PXDNQ92626 1479 aa33.51■■■□□ 2.96
RCCD1-206ENST00000556618 KRT28Q7Z3Y7 464 aa33.51■■■□□ 2.95
RCCD1-206ENST00000556618 SLC12A5Q9H2X9 1139 aa33.51■■■□□ 2.95
RCCD1-206ENST00000556618 NINLQ9Y2I6 1382 aa33.47■■■□□ 2.95
RCCD1-206ENST00000556618 AKAP12Q02952 1782 aa33.46■■■□□ 2.95
RCCD1-206ENST00000556618 POLR3GLQ9BT43 218 aa33.46■■■□□ 2.95
RCCD1-206ENST00000556618 MYOM1P52179 1685 aa33.45■■■□□ 2.94
RCCD1-206ENST00000556618 LRRC59Q96AG4 307 aaKnown RBP33.44■■■□□ 2.94
RCCD1-206ENST00000556618 CD163L1Q9NR16 1453 aa33.43■■■□□ 2.94
RCCD1-206ENST00000556618 CPSF1Q10570 1443 aaKnown RBP33.43■■■□□ 2.94
RCCD1-206ENST00000556618 KIF7Q2M1P5 1343 aa33.43■■■□□ 2.94
RCCD1-206ENST00000556618 ZNF692Q9BU19 519 aaPredicted RBP33.43■■■□□ 2.94
RCCD1-206ENST00000556618 TRPM3Q9HCF6 1732 aaPredicted RBP33.42■■■□□ 2.94
RCCD1-206ENST00000556618 TERF2IPQ9NYB0 399 aa33.4■■■□□ 2.94
RCCD1-206ENST00000556618 SBNO1A3KN83 1393 aa33.4■■■□□ 2.94
RCCD1-206ENST00000556618 USP6P35125 1406 aa33.39■■■□□ 2.94
RCCD1-206ENST00000556618 HDGFL2Q7Z4V5 671 aaPredicted RBP33.38■■■□□ 2.93
RCCD1-206ENST00000556618 MON2Q7Z3U7 1717 aa33.38■■■□□ 2.93
RCCD1-206ENST00000556618 KTN1Q86UP2 1357 aaKnown RBP33.37■■■□□ 2.93
RCCD1-206ENST00000556618 SPATA31A3Q5VYP0 1347 aa33.37■■■□□ 2.93
RCCD1-206ENST00000556618 A0A1W2PP64 1363 aa33.37■■■□□ 2.93
RCCD1-206ENST00000556618 CCDC7Q96M83 1385 aa33.37■■■□□ 2.93
RCCD1-206ENST00000556618 WASHC2AQ641Q2 1341 aa33.36■■■□□ 2.93
RCCD1-206ENST00000556618 PAK3O75914 559 aaPredicted RBP33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms