RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 PRAG1Q86YV5 1406 aa15.53■□□□□ 0.08
SPTLC2-205ENST00000556607 LRPPRCP42704 1394 aaKnown RBP15.53■□□□□ 0.08
SPTLC2-205ENST00000556607 C8orf37Q96NL8 207 aa15.52■□□□□ 0.08
SPTLC2-205ENST00000556607 KDM2AQ9Y2K7 1162 aa15.52■□□□□ 0.08
SPTLC2-205ENST00000556607 YTHDC2Q9H6S0 1430 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 DHX57Q6P158 1386 aaKnown RBP15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 PNPLA6Q8IY17 1366 aa15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 LAMC1P11047 1609 aa15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 CDC42BPGQ6DT37 1551 aa15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 CFAP70Q5T0N1 1121 aa15.51■□□□□ 0.07
SPTLC2-205ENST00000556607 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
SPTLC2-205ENST00000556607 AFF2P51816 1311 aa15.5■□□□□ 0.07
SPTLC2-205ENST00000556607 ADAMTS2O95450 1211 aa15.5■□□□□ 0.07
SPTLC2-205ENST00000556607 C14orf93Q9H972 538 aaKnown RBP15.5■□□□□ 0.07
SPTLC2-205ENST00000556607 PLEKHH1Q9ULM0 1364 aa15.49■□□□□ 0.07
SPTLC2-205ENST00000556607 MYOM2P54296 1465 aa15.49■□□□□ 0.07
SPTLC2-205ENST00000556607 SAFB2Q14151 953 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPTLC2-205ENST00000556607 TECPR2O15040 1411 aa15.49■□□□□ 0.07
SPTLC2-205ENST00000556607 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 NPHP3Q7Z494 1330 aa15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 FOXO3O43524 673 aa15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 RXRBP28702 533 aa15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 XPCQ01831 940 aaPredicted RBP15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 DCAF11Q8TEB1 546 aa15.48■□□□□ 0.07
SPTLC2-205ENST00000556607 NGLY1Q96IV0 654 aa15.47■□□□□ 0.07
SPTLC2-205ENST00000556607 POGKQ9P215 609 aa15.47■□□□□ 0.07
SPTLC2-205ENST00000556607 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
SPTLC2-205ENST00000556607 FMN2Q9NZ56 1722 aa15.46■□□□□ 0.07
SPTLC2-205ENST00000556607 NRXN1Q9ULB1 1477 aa15.46■□□□□ 0.06
SPTLC2-205ENST00000556607 PRAM1Q96QH2 718 aa15.45■□□□□ 0.06
SPTLC2-205ENST00000556607 HRCP23327 699 aa15.44■□□□□ 0.06
SPTLC2-205ENST00000556607 SIRT1Q96EB6 747 aa15.44■□□□□ 0.06
SPTLC2-205ENST00000556607 QTRT2Q9H974 415 aaKnown RBP15.44■□□□□ 0.06
SPTLC2-205ENST00000556607 TRAK1Q9UPV9 953 aa15.44■□□□□ 0.06
SPTLC2-205ENST00000556607 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
SPTLC2-205ENST00000556607 PLEKHG5O94827 1062 aa15.41■□□□□ 0.06
SPTLC2-205ENST00000556607 USP21Q9UK80 565 aa15.41■□□□□ 0.06
SPTLC2-205ENST00000556607 COL22A1Q8NFW1 1626 aaPredicted RBP15.41■□□□□ 0.06
SPTLC2-205ENST00000556607 PXDNQ92626 1479 aa15.4■□□□□ 0.06
SPTLC2-205ENST00000556607 KRT28Q7Z3Y7 464 aa15.4■□□□□ 0.06
SPTLC2-205ENST00000556607 HIRIP3Q9BW71 556 aaPredicted RBP15.4■□□□□ 0.06
SPTLC2-205ENST00000556607 PHF8Q9UPP1 1060 aa15.4■□□□□ 0.06
SPTLC2-205ENST00000556607 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
SPTLC2-205ENST00000556607 HAP1P54257 671 aaPredicted RBP15.39■□□□□ 0.05
SPTLC2-205ENST00000556607 RBM6P78332 1123 aaKnown RBP15.39■□□□□ 0.05
SPTLC2-205ENST00000556607 PSME1Q06323 249 aa15.38■□□□□ 0.05
SPTLC2-205ENST00000556607 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
SPTLC2-205ENST00000556607 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
SPTLC2-205ENST00000556607 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
SPTLC2-205ENST00000556607 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
SPTLC2-205ENST00000556607 PMFBP1Q8TBY8 1022 aa15.37■□□□□ 0.05
SPTLC2-205ENST00000556607 ADGRB1O14514 1584 aa15.36■□□□□ 0.05
SPTLC2-205ENST00000556607 TRPC5Q9UL62 973 aaPredicted RBP15.36■□□□□ 0.05
SPTLC2-205ENST00000556607 SPATA31A3Q5VYP0 1347 aa15.36■□□□□ 0.05
SPTLC2-205ENST00000556607 CDK12Q9NYV4 1490 aaPredicted RBP15.35■□□□□ 0.05
SPTLC2-205ENST00000556607 UPF1Q92900 1129 aaKnown RBP eCLIP15.34■□□□□ 0.05
SPTLC2-205ENST00000556607 FNBP4Q8N3X1 1017 aaPredicted RBP15.33■□□□□ 0.04
SPTLC2-205ENST00000556607 RGS12O14924 1447 aa15.33■□□□□ 0.04
SPTLC2-205ENST00000556607 ADGRB2O60241 1585 aa15.32■□□□□ 0.04
SPTLC2-205ENST00000556607 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
SPTLC2-205ENST00000556607 ARHGEF28Q8N1W1 1705 aaKnown RBP15.32■□□□□ 0.04
SPTLC2-205ENST00000556607 TNS3Q68CZ2 1445 aa15.32■□□□□ 0.04
SPTLC2-205ENST00000556607 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
SPTLC2-205ENST00000556607 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
SPTLC2-205ENST00000556607 ANKARQ7Z5J8 1434 aa15.31■□□□□ 0.04
SPTLC2-205ENST00000556607 WASLO00401 505 aaPredicted RBP15.3■□□□□ 0.04
SPTLC2-205ENST00000556607 GPRASP1Q5JY77 1395 aa15.29■□□□□ 0.04
SPTLC2-205ENST00000556607 PAK3O75914 559 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-205ENST00000556607 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-205ENST00000556607 TULP4Q9NRJ4 1543 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 ATRNO75882 1429 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 SBNO1A3KN83 1393 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 ITSN1Q15811 1721 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 KIAA1210Q9ULL0 1709 aa15.28■□□□□ 0.04
SPTLC2-205ENST00000556607 BCL9LQ86UU0 1499 aa15.27■□□□□ 0.04
SPTLC2-205ENST00000556607 GJD4Q96KN9 370 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-205ENST00000556607 CCDC9Q9Y3X0 531 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-205ENST00000556607 PRR36Q9H6K5 1346 aa15.26■□□□□ 0.03
SPTLC2-205ENST00000556607 NEUROD1Q13562 356 aa15.26■□□□□ 0.03
SPTLC2-205ENST00000556607 UNC5CLQ8IV45 518 aa15.26■□□□□ 0.03
SPTLC2-205ENST00000556607 ABCA3Q99758 1704 aa15.26■□□□□ 0.03
SPTLC2-205ENST00000556607 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.26■□□□□ 0.03
SPTLC2-205ENST00000556607 NBPF1Q3BBV0 1214 aa15.25■□□□□ 0.03
SPTLC2-205ENST00000556607 TRPM3Q9HCF6 1732 aaPredicted RBP15.25■□□□□ 0.03
SPTLC2-205ENST00000556607 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
SPTLC2-205ENST00000556607 ATAD2Q6PL18 1390 aa15.24■□□□□ 0.03
SPTLC2-205ENST00000556607 NUDT16Q96DE0 195 aaKnown RBP15.24■□□□□ 0.03
SPTLC2-205ENST00000556607 CDK19Q9BWU1 502 aa15.24■□□□□ 0.03
SPTLC2-205ENST00000556607 SIN3AQ96ST3 1273 aa15.23■□□□□ 0.03
SPTLC2-205ENST00000556607 SLIT2O94813 1529 aa15.22■□□□□ 0.03
SPTLC2-205ENST00000556607 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
SPTLC2-205ENST00000556607 NWD2Q9ULI1 1742 aa15.21■□□□□ 0.03
SPTLC2-205ENST00000556607 A0A0G2JS52 829 aa15.21■□□□□ 0.03
SPTLC2-205ENST00000556607 SRPK2P78362 688 aaKnown RBP15.21■□□□□ 0.03
SPTLC2-205ENST00000556607 MYT1Q01538 1121 aa15.21■□□□□ 0.03
SPTLC2-205ENST00000556607 L3MBTL2Q969R5 705 aa15.21■□□□□ 0.03
SPTLC2-205ENST00000556607 FAM83GA6ND36 823 aa15.2■□□□□ 0.02
SPTLC2-205ENST00000556607 ATP7BP35670 1465 aa15.2■□□□□ 0.02
SPTLC2-205ENST00000556607 RALGAPBQ86X10 1494 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms