RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 BRD4O60885 1362 aaPredicted RBP6.77□□□□□ -1.33
TMEM260-210ENST00000556422 MYBBP1AQ9BQG0 1328 aaKnown RBP6.77□□□□□ -1.33
TMEM260-210ENST00000556422 ZFP91Q96JP5 570 aaPredicted RBP6.76□□□□□ -1.33
TMEM260-210ENST00000556422 ADGRB1O14514 1584 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 PIK3C2GO75747 1445 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 TSHZ2Q9NRE2 1034 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 BRPF3Q9ULD4 1205 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 TMF1P82094 1093 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 RALBP1Q15311 655 aa6.76□□□□□ -1.33
TMEM260-210ENST00000556422 PREX1Q8TCU6 1659 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 KIF13AQ9H1H9 1805 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 ERVK-7P63135 1459 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 NPM3O75607 178 aaKnown RBP6.75□□□□□ -1.33
TMEM260-210ENST00000556422 GGT6Q6P531 493 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 NEXMIFQ5QGS0 1516 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 CFAP70Q5T0N1 1121 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.75□□□□□ -1.33
TMEM260-210ENST00000556422 PANK3Q9H999 370 aa6.75□□□□□ -1.33
TMEM260-210ENST00000556422 QRICH2Q9H0J4 1663 aa6.74□□□□□ -1.33
TMEM260-210ENST00000556422 ARHGAP31Q2M1Z3 1444 aa6.74□□□□□ -1.33
TMEM260-210ENST00000556422 WASHC2CQ9Y4E1 1318 aa6.74□□□□□ -1.33
TMEM260-210ENST00000556422 ARHGEF28Q8N1W1 1705 aaKnown RBP6.74□□□□□ -1.33
TMEM260-210ENST00000556422 SMG6Q86US8 1419 aaKnown RBP6.73□□□□□ -1.33
TMEM260-210ENST00000556422 TMC1Q8TDI8 760 aa6.73□□□□□ -1.33
TMEM260-210ENST00000556422 PTMSP20962 102 aa6.73□□□□□ -1.33
TMEM260-210ENST00000556422 CANXP27824 592 aaKnown RBP6.73□□□□□ -1.33
TMEM260-210ENST00000556422 NLRP13Q86W25 1043 aa6.73□□□□□ -1.33
TMEM260-210ENST00000556422 REREQ9P2R6 1566 aa6.73□□□□□ -1.33
TMEM260-210ENST00000556422 TMEM131LA2VDJ0 1609 aa6.73□□□□□ -1.33
TMEM260-210ENST00000556422 EIF3AQ14152 1382 aaKnown RBP6.72□□□□□ -1.33
TMEM260-210ENST00000556422 SBNO2Q9Y2G9 1366 aa6.72□□□□□ -1.33
TMEM260-210ENST00000556422 SENP3-EIF4A1A0A087X0R7 540 aa6.72□□□□□ -1.33
TMEM260-210ENST00000556422 CC2D1BQ5T0F9 858 aaKnown RBP6.72□□□□□ -1.33
TMEM260-210ENST00000556422 ASXL1Q8IXJ9 1541 aa6.72□□□□□ -1.33
TMEM260-210ENST00000556422 PSMD1Q99460 953 aa6.71□□□□□ -1.33
TMEM260-210ENST00000556422 BLMP54132 1417 aaPredicted RBP6.71□□□□□ -1.34
TMEM260-210ENST00000556422 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
TMEM260-210ENST00000556422 FAM69CQ0P6D2 419 aa6.71□□□□□ -1.34
TMEM260-210ENST00000556422 IL27Q8NEV9 243 aa6.7□□□□□ -1.34
TMEM260-210ENST00000556422 CLTCQ00610 1675 aaKnown RBP6.7□□□□□ -1.34
TMEM260-210ENST00000556422 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
TMEM260-210ENST00000556422 AGLP35573 1532 aa6.7□□□□□ -1.34
TMEM260-210ENST00000556422 RNF123Q5XPI4 1314 aa6.7□□□□□ -1.34
TMEM260-210ENST00000556422 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
TMEM260-210ENST00000556422 NUDCQ9Y266 331 aa6.7□□□□□ -1.34
TMEM260-210ENST00000556422 IPO4Q8TEX9 1081 aaKnown RBP6.69□□□□□ -1.34
TMEM260-210ENST00000556422 INSRP06213 1382 aa6.69□□□□□ -1.34
TMEM260-210ENST00000556422 NPC1L1Q9UHC9 1359 aa6.69□□□□□ -1.34
TMEM260-210ENST00000556422 RPGRIP1LQ68CZ1 1315 aa6.69□□□□□ -1.34
TMEM260-210ENST00000556422 CHGAP10645 457 aaKnown RBP6.69□□□□□ -1.34
TMEM260-210ENST00000556422 SECISBP2LQ93073 1101 aaKnown RBP6.69□□□□□ -1.34
TMEM260-210ENST00000556422 TULP4Q9NRJ4 1543 aa6.69□□□□□ -1.34
TMEM260-210ENST00000556422 IDI1Q13907 227 aa6.69□□□□□ -1.34
TMEM260-210ENST00000556422 ZFYVE9O95405 1425 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 ARHGEF40Q8TER5 1519 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 SETD1AO15047 1707 aaKnown RBP6.68□□□□□ -1.34
TMEM260-210ENST00000556422 CLSTN1O94985 981 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 USP32Q8NFA0 1604 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 TMEM132EQ6IEE7 984 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 PLCD4Q9BRC7 762 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 CARD14Q9BXL6 1004 aa6.68□□□□□ -1.34
TMEM260-210ENST00000556422 CENPJQ9HC77 1338 aaPredicted RBP6.67□□□□□ -1.34
TMEM260-210ENST00000556422 PPP2R1AP30153 589 aa6.67□□□□□ -1.34
TMEM260-210ENST00000556422 SPATA31D1Q6ZQQ2 1576 aa6.67□□□□□ -1.34
TMEM260-210ENST00000556422 NUTM2DQ5VT03 806 aaPredicted RBP6.67□□□□□ -1.34
TMEM260-210ENST00000556422 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
TMEM260-210ENST00000556422 SHPRHQ149N8 1683 aa6.67□□□□□ -1.34
TMEM260-210ENST00000556422 TRAK1Q9UPV9 953 aa6.67□□□□□ -1.34
TMEM260-210ENST00000556422 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
TMEM260-210ENST00000556422 FBXO31Q5XUX0 539 aaPredicted RBP6.66□□□□□ -1.34
TMEM260-210ENST00000556422 PTPRMP28827 1452 aa6.66□□□□□ -1.34
TMEM260-210ENST00000556422 SLC52A1Q9NWF4 448 aa6.66□□□□□ -1.34
TMEM260-210ENST00000556422 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
TMEM260-210ENST00000556422 ADAMTS8Q9UP79 889 aa6.65□□□□□ -1.35
TMEM260-210ENST00000556422 ALKQ9UM73 1620 aa6.65□□□□□ -1.35
TMEM260-210ENST00000556422 NRXN3Q9Y4C0 1643 aa6.65□□□□□ -1.35
TMEM260-210ENST00000556422 VGFO15240 615 aaPredicted RBP6.64□□□□□ -1.35
TMEM260-210ENST00000556422 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
TMEM260-210ENST00000556422 CDCA7LQ96GN5 454 aa6.64□□□□□ -1.35
TMEM260-210ENST00000556422 TMED8Q6PL24 325 aaPredicted RBP6.64□□□□□ -1.35
TMEM260-210ENST00000556422 PLEKHH1Q9ULM0 1364 aa6.64□□□□□ -1.35
TMEM260-210ENST00000556422 NSD3Q9BZ95 1437 aa6.64□□□□□ -1.35
TMEM260-210ENST00000556422 A2ML1A8K2U0 1454 aa6.64□□□□□ -1.35
TMEM260-210ENST00000556422 OS9Q13438 667 aaPredicted RBP6.63□□□□□ -1.35
TMEM260-210ENST00000556422 HSP90AA2PQ14568 343 aaPredicted RBP6.63□□□□□ -1.35
TMEM260-210ENST00000556422 PTMAP06454 111 aaKnown RBP6.63□□□□□ -1.35
TMEM260-210ENST00000556422 CWC22Q9HCG8 908 aaKnown RBP6.63□□□□□ -1.35
TMEM260-210ENST00000556422 ZNF521Q96K83 1311 aa6.63□□□□□ -1.35
TMEM260-210ENST00000556422 SLC12A5Q9H2X9 1139 aa6.63□□□□□ -1.35
TMEM260-210ENST00000556422 ANKRD26Q9UPS8 1709 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 B4GALNT3Q6L9W6 998 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 PLCD3Q8N3E9 789 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 PUS7Q96PZ0 661 aaKnown RBP6.62□□□□□ -1.35
TMEM260-210ENST00000556422 PDE3BQ13370 1112 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 USP35Q9P2H5 1018 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 YTHDC2Q9H6S0 1430 aaKnown RBP6.62□□□□□ -1.35
TMEM260-210ENST00000556422 CD163L1Q9NR16 1453 aa6.62□□□□□ -1.35
TMEM260-210ENST00000556422 APPP05067 770 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms