RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 FAM160A2Q8N612 972 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-241ENST00000556374 CCDC102AQ96A19 550 aa7.98□□□□□ -1.13
ATXN3-241ENST00000556374 BARGINQ6ZT62 677 aa7.97□□□□□ -1.13
ATXN3-241ENST00000556374 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-241ENST00000556374 NLRP7Q8WX94 980 aa7.96□□□□□ -1.14
ATXN3-241ENST00000556374 FAM217BQ9NTX9 383 aaPredicted RBP7.96□□□□□ -1.14
ATXN3-241ENST00000556374 EIF4G1Q04637 1599 aaKnown RBP7.96□□□□□ -1.14
ATXN3-241ENST00000556374 ZMYND10O75800 440 aa7.95□□□□□ -1.14
ATXN3-241ENST00000556374 PKDCCQ504Y2 493 aa7.95□□□□□ -1.14
ATXN3-241ENST00000556374 PLA2G2CQ5R387 149 aa7.95□□□□□ -1.14
ATXN3-241ENST00000556374 ZBTB24O43167 697 aaPredicted RBP7.94□□□□□ -1.14
ATXN3-241ENST00000556374 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
ATXN3-241ENST00000556374 USB1Q9BQ65 265 aaKnown RBP7.94□□□□□ -1.14
ATXN3-241ENST00000556374 FCF1Q9Y324 198 aaKnown RBP7.94□□□□□ -1.14
ATXN3-241ENST00000556374 HOXA2O43364 376 aa7.93□□□□□ -1.14
ATXN3-241ENST00000556374 AMHR2Q16671 573 aa7.93□□□□□ -1.14
ATXN3-241ENST00000556374 DXOO77932 396 aaKnown RBP7.92□□□□□ -1.14
ATXN3-241ENST00000556374 RNF19BQ6ZMZ0 732 aa7.92□□□□□ -1.14
ATXN3-241ENST00000556374 DIXDC1Q155Q3 683 aa7.91□□□□□ -1.14
ATXN3-241ENST00000556374 CRIPAKQ8N1N5 446 aa7.91□□□□□ -1.14
ATXN3-241ENST00000556374 PKD2L1Q9P0L9 805 aa7.91□□□□□ -1.14
ATXN3-241ENST00000556374 MYO15BQ96JP2 1530 aa7.91□□□□□ -1.14
ATXN3-241ENST00000556374 CUX2O14529 1486 aa7.9□□□□□ -1.14
ATXN3-241ENST00000556374 GJA5P36382 358 aa7.9□□□□□ -1.14
ATXN3-241ENST00000556374 NUTM1Q86Y26 1132 aa7.9□□□□□ -1.14
ATXN3-241ENST00000556374 AVPP01185 164 aa7.89□□□□□ -1.15
ATXN3-241ENST00000556374 MYT1Q01538 1121 aa7.89□□□□□ -1.15
ATXN3-241ENST00000556374 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
ATXN3-241ENST00000556374 TOR4AQ9NXH8 423 aa7.89□□□□□ -1.15
ATXN3-241ENST00000556374 POTECB2RU33 542 aa7.88□□□□□ -1.15
ATXN3-241ENST00000556374 SSTR3P32745 418 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-241ENST00000556374 RETREG3Q86VR2 466 aa7.88□□□□□ -1.15
ATXN3-241ENST00000556374 REPIN1Q9BWE0 567 aaKnown RBP7.88□□□□□ -1.15
ATXN3-241ENST00000556374 SPDYE5A6NIY4 337 aa7.87□□□□□ -1.15
ATXN3-241ENST00000556374 WNT7AO00755 349 aa7.87□□□□□ -1.15
ATXN3-241ENST00000556374 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
ATXN3-241ENST00000556374 FAM187AA6NFU0 413 aa7.86□□□□□ -1.15
ATXN3-241ENST00000556374 JUNDP17535 347 aa7.86□□□□□ -1.15
ATXN3-241ENST00000556374 SMCPP49901 116 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-241ENST00000556374 WNT7BP56706 349 aa7.86□□□□□ -1.15
ATXN3-241ENST00000556374 CYP4X1Q8N118 509 aa7.86□□□□□ -1.15
ATXN3-241ENST00000556374 PRDM9Q9NQV7 894 aa7.86□□□□□ -1.15
ATXN3-241ENST00000556374 TNFRSF10AO00220 468 aa7.85□□□□□ -1.15
ATXN3-241ENST00000556374 TRIM32Q13049 653 aa7.85□□□□□ -1.15
ATXN3-241ENST00000556374 DESI1Q6ICB0 168 aa7.85□□□□□ -1.15
ATXN3-241ENST00000556374 FDX1P10109 184 aa7.83□□□□□ -1.16
ATXN3-241ENST00000556374 SNIP1Q8TAD8 396 aaKnown RBP7.83□□□□□ -1.16
ATXN3-241ENST00000556374 SPIRE2Q8WWL2 714 aa7.83□□□□□ -1.16
ATXN3-241ENST00000556374 FOXC1Q12948 553 aa7.82□□□□□ -1.16
ATXN3-241ENST00000556374 TTLL12Q14166 644 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-241ENST00000556374 AK7Q96M32 723 aa7.82□□□□□ -1.16
ATXN3-241ENST00000556374 AAASQ9NRG9 546 aa7.82□□□□□ -1.16
ATXN3-241ENST00000556374 ST8SIA5O15466 376 aa7.81□□□□□ -1.16
ATXN3-241ENST00000556374 GIGYF2Q6Y7W6 1299 aaKnown RBP7.81□□□□□ -1.16
ATXN3-241ENST00000556374 PTPRNQ16849 979 aa7.8□□□□□ -1.16
ATXN3-241ENST00000556374 TTC24A2A3L6 582 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-241ENST00000556374 TRIM66O15016 1216 aa7.79□□□□□ -1.16
ATXN3-241ENST00000556374 HLA-CQ95604 372 aa7.79□□□□□ -1.16
ATXN3-241ENST00000556374 NUDT12Q9BQG2 462 aa7.79□□□□□ -1.16
ATXN3-241ENST00000556374 MS4A1P11836 297 aa7.78□□□□□ -1.16
ATXN3-241ENST00000556374 MTMR2Q13614 643 aa7.78□□□□□ -1.16
ATXN3-241ENST00000556374 TUSC1Q2TAM9 212 aa7.78□□□□□ -1.16
ATXN3-241ENST00000556374 PRPF38BQ5VTL8 546 aaKnown RBP7.78□□□□□ -1.16
ATXN3-241ENST00000556374 BEGAINQ9BUH8 593 aa7.78□□□□□ -1.16
ATXN3-241ENST00000556374 PCDHGC3Q9UN70 934 aa7.78□□□□□ -1.16
ATXN3-241ENST00000556374 C6orf229H3BNL8 230 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 AXIN1O15169 862 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 CCNYL3P0C7X3 344 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 GUCA2AQ02747 115 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 MRGPRX2Q96LB1 330 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 EVA1BQ9NVM1 165 aa7.77□□□□□ -1.17
ATXN3-241ENST00000556374 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
ATXN3-241ENST00000556374 PARP9Q8IXQ6 854 aa7.76□□□□□ -1.17
ATXN3-241ENST00000556374 CCDC24Q8N4L8 307 aa7.76□□□□□ -1.17
ATXN3-241ENST00000556374 MPNDQ8N594 471 aa7.76□□□□□ -1.17
ATXN3-241ENST00000556374 SCRIBQ14160 1630 aa7.76□□□□□ -1.17
ATXN3-241ENST00000556374 MOXD2PA6NHM9 499 aa7.75□□□□□ -1.17
ATXN3-241ENST00000556374 SPTLC1O15269 473 aa7.75□□□□□ -1.17
ATXN3-241ENST00000556374 RC3H1Q5TC82 1133 aaKnown RBP7.75□□□□□ -1.17
ATXN3-241ENST00000556374 RSBN1LQ6PCB5 846 aaPredicted RBP7.75□□□□□ -1.17
ATXN3-241ENST00000556374 SMPD1P17405 629 aa7.74□□□□□ -1.17
ATXN3-241ENST00000556374 SYMPKQ92797 1274 aaKnown RBP7.74□□□□□ -1.17
ATXN3-241ENST00000556374 TBC1D2Q9BYX2 928 aa7.74□□□□□ -1.17
ATXN3-241ENST00000556374 SKOR1P84550 965 aa7.73□□□□□ -1.17
ATXN3-241ENST00000556374 KCNH2Q12809 1159 aa7.73□□□□□ -1.17
ATXN3-241ENST00000556374 PRR7Q8TB68 274 aa7.73□□□□□ -1.17
ATXN3-241ENST00000556374 ERCC6Q03468 1493 aa7.73□□□□□ -1.17
ATXN3-241ENST00000556374 SIAH2O43255 324 aa7.72□□□□□ -1.17
ATXN3-241ENST00000556374 NDUFV2P19404 249 aa7.72□□□□□ -1.17
ATXN3-241ENST00000556374 ZBTB3Q9H5J0 574 aa7.72□□□□□ -1.17
ATXN3-241ENST00000556374 LYPD8Q6UX82 237 aa7.71□□□□□ -1.18
ATXN3-241ENST00000556374 SENP2Q9HC62 589 aa7.71□□□□□ -1.18
ATXN3-241ENST00000556374 PDE4DQ08499 809 aa7.7□□□□□ -1.18
ATXN3-241ENST00000556374 PTCRAQ6ISU1 281 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-241ENST00000556374 KIFC2Q96AC6 838 aa7.7□□□□□ -1.18
ATXN3-241ENST00000556374 UNC93B1Q9H1C4 597 aa7.7□□□□□ -1.18
ATXN3-241ENST00000556374 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
ATXN3-241ENST00000556374 PLEKHG3A1L390 1219 aa7.69□□□□□ -1.18
ATXN3-241ENST00000556374 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
ATXN3-241ENST00000556374 SH3BP2P78314 561 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms