RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 DISP1Q96F81 1524 aa9.7□□□□□ -0.86
HIF1A-208ENST00000556237 CASKIN1Q8WXD9 1431 aa9.69□□□□□ -0.86
HIF1A-208ENST00000556237 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
HIF1A-208ENST00000556237 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
HIF1A-208ENST00000556237 NRG2O14511 850 aaPredicted RBP9.68□□□□□ -0.86
HIF1A-208ENST00000556237 SWT1Q5T5J6 900 aaKnown RBP9.68□□□□□ -0.86
HIF1A-208ENST00000556237 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
HIF1A-208ENST00000556237 PADI6Q6TGC4 694 aa9.68□□□□□ -0.86
HIF1A-208ENST00000556237 SLF2Q8IX21 1173 aa9.68□□□□□ -0.86
HIF1A-208ENST00000556237 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
HIF1A-208ENST00000556237 LCE2BO14633 110 aa9.67□□□□□ -0.86
HIF1A-208ENST00000556237 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
HIF1A-208ENST00000556237 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
HIF1A-208ENST00000556237 KIAA0556O60303 1618 aa9.66□□□□□ -0.86
HIF1A-208ENST00000556237 PTPRGP23470 1445 aa9.65□□□□□ -0.86
HIF1A-208ENST00000556237 GGCXP38435 758 aa9.65□□□□□ -0.86
HIF1A-208ENST00000556237 FYCO1Q9BQS8 1478 aa9.65□□□□□ -0.87
HIF1A-208ENST00000556237 COPS2P61201 443 aa9.64□□□□□ -0.87
HIF1A-208ENST00000556237 NKX2-3Q8TAU0 364 aa9.64□□□□□ -0.87
HIF1A-208ENST00000556237 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
HIF1A-208ENST00000556237 PCF11O94913 1555 aaKnown RBP9.63□□□□□ -0.87
HIF1A-208ENST00000556237 EYA1Q99502 592 aa9.62□□□□□ -0.87
HIF1A-208ENST00000556237 PRR14Q9BWN1 585 aa9.62□□□□□ -0.87
HIF1A-208ENST00000556237 CDK11AQ9UQ88 783 aaPredicted RBP9.62□□□□□ -0.87
HIF1A-208ENST00000556237 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
HIF1A-208ENST00000556237 CLASP1Q7Z460 1538 aa9.61□□□□□ -0.87
HIF1A-208ENST00000556237 LRRC9Q6ZRR7 1453 aa9.61□□□□□ -0.87
HIF1A-208ENST00000556237 TIAM1Q13009 1591 aa9.61□□□□□ -0.87
HIF1A-208ENST00000556237 PLB1Q6P1J6 1458 aa9.6□□□□□ -0.87
HIF1A-208ENST00000556237 TMUB1Q9BVT8 246 aa9.6□□□□□ -0.87
HIF1A-208ENST00000556237 PDZRN3Q9UPQ7 1066 aa9.6□□□□□ -0.87
HIF1A-208ENST00000556237 SHROOM2Q13796 1616 aa9.6□□□□□ -0.87
HIF1A-208ENST00000556237 PLEKHD1A6NEE1 506 aa9.59□□□□□ -0.87
HIF1A-208ENST00000556237 ZPR1O75312 459 aa9.59□□□□□ -0.87
HIF1A-208ENST00000556237 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
HIF1A-208ENST00000556237 EPRSP07814 1512 aaKnown RBP9.58□□□□□ -0.88
HIF1A-208ENST00000556237 SEMA3EO15041 775 aa9.58□□□□□ -0.88
HIF1A-208ENST00000556237 PCDHB3Q9Y5E6 796 aa9.58□□□□□ -0.88
HIF1A-208ENST00000556237 CCDC18Q5T9S5 1454 aa9.58□□□□□ -0.88
HIF1A-208ENST00000556237 UACAQ9BZF9 1416 aa9.57□□□□□ -0.88
HIF1A-208ENST00000556237 HECW1Q76N89 1606 aa9.57□□□□□ -0.88
HIF1A-208ENST00000556237 RAPGEF6Q8TEU7 1601 aa9.57□□□□□ -0.88
HIF1A-208ENST00000556237 NUP153P49790 1475 aaKnown RBP9.56□□□□□ -0.88
HIF1A-208ENST00000556237 CDK13Q14004 1512 aaKnown RBP9.56□□□□□ -0.88
HIF1A-208ENST00000556237 ATP10BO94823 1461 aa9.55□□□□□ -0.88
HIF1A-208ENST00000556237 DNAJB2P25686 324 aa9.55□□□□□ -0.88
HIF1A-208ENST00000556237 MLLT3P42568 568 aaPredicted RBP9.55□□□□□ -0.88
HIF1A-208ENST00000556237 ABCA8O94911 1581 aa9.54□□□□□ -0.88
HIF1A-208ENST00000556237 PHLDB1Q86UU1 1377 aa9.54□□□□□ -0.88
HIF1A-208ENST00000556237 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
HIF1A-208ENST00000556237 PTGDRQ13258 359 aa9.54□□□□□ -0.88
HIF1A-208ENST00000556237 FAM50AQ14320 339 aaKnown RBP9.54□□□□□ -0.88
HIF1A-208ENST00000556237 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
HIF1A-208ENST00000556237 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
HIF1A-208ENST00000556237 ITGAEP38570 1179 aa9.53□□□□□ -0.88
HIF1A-208ENST00000556237 BLOC1S3Q6QNY0 202 aa9.53□□□□□ -0.88
HIF1A-208ENST00000556237 RBM46Q8TBY0 533 aaKnown RBP9.53□□□□□ -0.88
HIF1A-208ENST00000556237 CCNB3Q8WWL7 1395 aa9.52□□□□□ -0.88
HIF1A-208ENST00000556237 TMEM134Q9H6X4 195 aa9.52□□□□□ -0.89
HIF1A-208ENST00000556237 RNF223E7ERA6 249 aa9.51□□□□□ -0.89
HIF1A-208ENST00000556237 NCOA2Q15596 1464 aa9.51□□□□□ -0.89
HIF1A-208ENST00000556237 MAGI3Q5TCQ9 1506 aa9.51□□□□□ -0.89
HIF1A-208ENST00000556237 TROQ12816 1431 aaPredicted RBP9.5□□□□□ -0.89
HIF1A-208ENST00000556237 RRBP1Q9P2E9 1410 aaKnown RBP9.5□□□□□ -0.89
HIF1A-208ENST00000556237 SLC19A1P41440 591 aa9.5□□□□□ -0.89
HIF1A-208ENST00000556237 KMT5BQ4FZB7 885 aa9.5□□□□□ -0.89
HIF1A-208ENST00000556237 ADGRG1Q9Y653 693 aa9.5□□□□□ -0.89
HIF1A-208ENST00000556237 EHBP1L1Q8N3D4 1523 aa9.5□□□□□ -0.89
HIF1A-208ENST00000556237 TLL1O43897 1013 aa9.49□□□□□ -0.89
HIF1A-208ENST00000556237 ZNF787Q6DD87 383 aa9.49□□□□□ -0.89
HIF1A-208ENST00000556237 CYB5RLQ6IPT4 315 aa9.49□□□□□ -0.89
HIF1A-208ENST00000556237 UHRF1BP1LA0JNW5 1464 aa9.48□□□□□ -0.89
HIF1A-208ENST00000556237 ABCC2Q92887 1545 aa9.48□□□□□ -0.89
HIF1A-208ENST00000556237 ACTN4O43707 911 aaKnown RBP9.48□□□□□ -0.89
HIF1A-208ENST00000556237 SUPT6HQ7KZ85 1726 aaKnown RBP9.48□□□□□ -0.89
HIF1A-208ENST00000556237 RCCD1A6NED2 376 aa9.47□□□□□ -0.89
HIF1A-208ENST00000556237 TRIM67Q6ZTA4 783 aa9.47□□□□□ -0.89
HIF1A-208ENST00000556237 ANKLE1Q8NAG6 615 aa9.47□□□□□ -0.89
HIF1A-208ENST00000556237 CFDP1Q9UEE9 299 aaPredicted RBP9.47□□□□□ -0.89
HIF1A-208ENST00000556237 MYOM3Q5VTT5 1437 aa9.47□□□□□ -0.89
HIF1A-208ENST00000556237 NUTM2FA1L443 756 aa9.46□□□□□ -0.9
HIF1A-208ENST00000556237 CFHP08603 1231 aa9.46□□□□□ -0.9
HIF1A-208ENST00000556237 EMID1Q96A84 441 aaPredicted RBP9.46□□□□□ -0.9
HIF1A-208ENST00000556237 ZNF777Q9ULD5 760 aaPredicted RBP9.46□□□□□ -0.9
HIF1A-208ENST00000556237 FGD6Q6ZV73 1430 aa9.46□□□□□ -0.9
HIF1A-208ENST00000556237 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
HIF1A-208ENST00000556237 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.45□□□□□ -0.9
HIF1A-208ENST00000556237 S1PR4O95977 384 aa9.44□□□□□ -0.9
HIF1A-208ENST00000556237 FAM161AQ3B820 660 aa9.44□□□□□ -0.9
HIF1A-208ENST00000556237 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
HIF1A-208ENST00000556237 ARHGEF11O15085 1522 aa9.44□□□□□ -0.9
HIF1A-208ENST00000556237 KDM5BQ9UGL1 1544 aa9.44□□□□□ -0.9
HIF1A-208ENST00000556237 MIA2Q96PC5 1412 aa9.43□□□□□ -0.9
HIF1A-208ENST00000556237 ZNF644Q9H582 1327 aaPredicted RBP9.43□□□□□ -0.9
HIF1A-208ENST00000556237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
HIF1A-208ENST00000556237 FCHSD2O94868 740 aa9.43□□□□□ -0.9
HIF1A-208ENST00000556237 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
HIF1A-208ENST00000556237 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
HIF1A-208ENST00000556237 BCANQ96GW7 911 aa9.43□□□□□ -0.9
HIF1A-208ENST00000556237 PPEF1O14829 653 aaPredicted RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms