RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 C14orf37Q86TY3 774 aa10.11□□□□□ -0.79
PSEN1-216ENST00000556066 MSH6P52701 1360 aa10.11□□□□□ -0.79
PSEN1-216ENST00000556066 GALR2O43603 387 aaPredicted RBP10.1□□□□□ -0.79
PSEN1-216ENST00000556066 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
PSEN1-216ENST00000556066 TBX22Q9Y458 520 aa10.1□□□□□ -0.79
PSEN1-216ENST00000556066 KIF1BO60333 1816 aa10.1□□□□□ -0.79
PSEN1-216ENST00000556066 NAIPQ13075 1403 aa10.09□□□□□ -0.79
PSEN1-216ENST00000556066 DIP2AQ14689 1571 aa10.09□□□□□ -0.79
PSEN1-216ENST00000556066 ADAMTS13Q76LX8 1427 aa10.08□□□□□ -0.8
PSEN1-216ENST00000556066 TRPM2O94759 1503 aa10.07□□□□□ -0.8
PSEN1-216ENST00000556066 CLTCL1P53675 1640 aa10.07□□□□□ -0.8
PSEN1-216ENST00000556066 SLAIN2Q9P270 581 aa10.07□□□□□ -0.8
PSEN1-216ENST00000556066 PHLPP1O60346 1717 aa10.07□□□□□ -0.8
PSEN1-216ENST00000556066 AMOTL2Q9Y2J4 779 aa10.06□□□□□ -0.8
PSEN1-216ENST00000556066 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-216ENST00000556066 PIK3R4Q99570 1358 aa10.05□□□□□ -0.8
PSEN1-216ENST00000556066 NRXN3Q9Y4C0 1643 aa10.05□□□□□ -0.8
PSEN1-216ENST00000556066 HFM1A2PYH4 1435 aa10.05□□□□□ -0.8
PSEN1-216ENST00000556066 ATF3P18847 181 aa10.04□□□□□ -0.8
PSEN1-216ENST00000556066 OTUD5Q96G74 571 aa10.04□□□□□ -0.8
PSEN1-216ENST00000556066 PTPRUQ92729 1446 aa10.04□□□□□ -0.8
PSEN1-216ENST00000556066 SETBP1Q9Y6X0 1596 aa10.04□□□□□ -0.8
PSEN1-216ENST00000556066 SRCAPQ6ZRS2 3230 aa10.04□□□□□ -0.8
PSEN1-216ENST00000556066 NEXMIFQ5QGS0 1516 aa10.03□□□□□ -0.8
PSEN1-216ENST00000556066 CADPS2Q86UW7 1296 aa10.03□□□□□ -0.8
PSEN1-216ENST00000556066 C19orf44Q9H6X5 657 aa10.03□□□□□ -0.8
PSEN1-216ENST00000556066 XRN1Q8IZH2 1706 aaKnown RBP10.02□□□□□ -0.8
PSEN1-216ENST00000556066 NCOA3Q9Y6Q9 1424 aa10.02□□□□□ -0.81
PSEN1-216ENST00000556066 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
PSEN1-216ENST00000556066 UPF1Q92900 1129 aaKnown RBP eCLIP10.02□□□□□ -0.81
PSEN1-216ENST00000556066 PHF12Q96QT6 1004 aa10.02□□□□□ -0.81
PSEN1-216ENST00000556066 METP08581 1390 aa10.01□□□□□ -0.81
PSEN1-216ENST00000556066 POTEMA6NI47 508 aa10.01□□□□□ -0.81
PSEN1-216ENST00000556066 VASPP50552 380 aaPredicted RBP10.01□□□□□ -0.81
PSEN1-216ENST00000556066 JCADQ9P266 1359 aa10.01□□□□□ -0.81
PSEN1-216ENST00000556066 SETD1AO15047 1707 aaKnown RBP10□□□□□ -0.81
PSEN1-216ENST00000556066 COL16A1Q07092 1604 aaPredicted RBP10□□□□□ -0.81
PSEN1-216ENST00000556066 PPLO60437 1756 aa9.99□□□□□ -0.81
PSEN1-216ENST00000556066 VGFO15240 615 aaPredicted RBP9.99□□□□□ -0.81
PSEN1-216ENST00000556066 MAMSTRQ6ZN01 415 aa9.99□□□□□ -0.81
PSEN1-216ENST00000556066 LRP6O75581 1613 aa9.99□□□□□ -0.81
PSEN1-216ENST00000556066 RTN4Q9NQC3 1192 aaKnown RBP9.98□□□□□ -0.81
PSEN1-216ENST00000556066 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
PSEN1-216ENST00000556066 NALCNQ8IZF0 1738 aa9.98□□□□□ -0.81
PSEN1-216ENST00000556066 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
PSEN1-216ENST00000556066 BRINP3Q76B58 766 aa9.97□□□□□ -0.81
PSEN1-216ENST00000556066 SLC39A7Q92504 469 aa9.97□□□□□ -0.81
PSEN1-216ENST00000556066 DCCP43146 1447 aa9.97□□□□□ -0.81
PSEN1-216ENST00000556066 AHDC1Q5TGY3 1603 aaPredicted RBP9.96□□□□□ -0.81
PSEN1-216ENST00000556066 C7P10643 843 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 RGL3Q3MIN7 710 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 MEX3CQ5U5Q3 659 aaKnown RBP9.96□□□□□ -0.82
PSEN1-216ENST00000556066 MPHOSPH9Q99550 1183 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 SHPRHQ149N8 1683 aa9.96□□□□□ -0.82
PSEN1-216ENST00000556066 ZNF772Q68DY9 489 aaPredicted RBP9.95□□□□□ -0.82
PSEN1-216ENST00000556066 SPATA31A6Q5VVP1 1343 aa9.95□□□□□ -0.82
PSEN1-216ENST00000556066 MST1RQ04912 1400 aa9.95□□□□□ -0.82
PSEN1-216ENST00000556066 ADGRL3Q9HAR2 1447 aa9.95□□□□□ -0.82
PSEN1-216ENST00000556066 ASXL1Q8IXJ9 1541 aa9.95□□□□□ -0.82
PSEN1-216ENST00000556066 NUTM2BA6NNL0 878 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-216ENST00000556066 NUTM2EB1AL46 878 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-216ENST00000556066 NUTM2AQ8IVF1 878 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-216ENST00000556066 METRNQ9UJH8 293 aa9.94□□□□□ -0.82
PSEN1-216ENST00000556066 NHSL1Q5SYE7 1610 aa9.93□□□□□ -0.82
PSEN1-216ENST00000556066 ROBO2Q9HCK4 1378 aa9.93□□□□□ -0.82
PSEN1-216ENST00000556066 POTEB2H3BUK9 544 aa9.93□□□□□ -0.82
PSEN1-216ENST00000556066 RXRBP28702 533 aa9.93□□□□□ -0.82
PSEN1-216ENST00000556066 DDX17Q92841 729 aaKnown RBP9.93□□□□□ -0.82
PSEN1-216ENST00000556066 IFT172Q9UG01 1749 aa9.93□□□□□ -0.82
PSEN1-216ENST00000556066 PTCH1Q13635 1447 aa9.92□□□□□ -0.82
PSEN1-216ENST00000556066 ADGRF5Q8IZF2 1346 aa9.92□□□□□ -0.82
PSEN1-216ENST00000556066 STK26Q9P289 416 aa9.92□□□□□ -0.82
PSEN1-216ENST00000556066 SETD5Q9C0A6 1442 aa9.91□□□□□ -0.82
PSEN1-216ENST00000556066 SPATA31E1Q6ZUB1 1445 aa9.9□□□□□ -0.82
PSEN1-216ENST00000556066 ASTLQ6HA08 431 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-216ENST00000556066 IFNLR1Q8IU57 520 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-216ENST00000556066 LRRC59Q96AG4 307 aaKnown RBP9.9□□□□□ -0.82
PSEN1-216ENST00000556066 SCUBE2Q9NQ36 999 aa9.9□□□□□ -0.82
PSEN1-216ENST00000556066 C1orf167Q5SNV9 1468 aa9.9□□□□□ -0.83
PSEN1-216ENST00000556066 ANKRD30BQ9BXX2 1392 aa9.89□□□□□ -0.83
PSEN1-216ENST00000556066 TMEM132EQ6IEE7 984 aa9.89□□□□□ -0.83
PSEN1-216ENST00000556066 ORAI2Q96SN7 254 aa9.89□□□□□ -0.83
PSEN1-216ENST00000556066 CDK12Q9NYV4 1490 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-216ENST00000556066 RAB3GAP2Q9H2M9 1393 aa9.88□□□□□ -0.83
PSEN1-216ENST00000556066 AFF2P51816 1311 aa9.88□□□□□ -0.83
PSEN1-216ENST00000556066 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
PSEN1-216ENST00000556066 PELP1Q8IZL8 1130 aaKnown RBP9.88□□□□□ -0.83
PSEN1-216ENST00000556066 MS4A3Q96HJ5 214 aa9.88□□□□□ -0.83
PSEN1-216ENST00000556066 NUTM2FA1L443 756 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 PLEKHG5O94827 1062 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 ESCO1Q5FWF5 840 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 WAPLQ7Z5K2 1190 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 PRAG1Q86YV5 1406 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
PSEN1-216ENST00000556066 ATMINO43313 823 aaPredicted RBP9.86□□□□□ -0.83
PSEN1-216ENST00000556066 PIK3C2GO75747 1445 aa9.86□□□□□ -0.83
PSEN1-216ENST00000556066 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
PSEN1-216ENST00000556066 CDC42BPGQ6DT37 1551 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms