RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
EFCAB11-209ENST00000556005 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 CGNL1Q0VF96 1302 aa13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 ERICH6BQ5W0A0 696 aa13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 MINK1Q8N4C8 1332 aaPredicted RBP13.47□□□□□ -0.25
EFCAB11-209ENST00000556005 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
EFCAB11-209ENST00000556005 BCANQ96GW7 911 aa13.46□□□□□ -0.25
EFCAB11-209ENST00000556005 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
EFCAB11-209ENST00000556005 ABCC11Q96J66 1382 aa13.46□□□□□ -0.25
EFCAB11-209ENST00000556005 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
EFCAB11-209ENST00000556005 MORC1Q86VD1 984 aa13.46□□□□□ -0.26
EFCAB11-209ENST00000556005 DLC1Q96QB1 1528 aa13.46□□□□□ -0.26
EFCAB11-209ENST00000556005 NLRP1Q9C000 1473 aa13.45□□□□□ -0.26
EFCAB11-209ENST00000556005 SENP3-EIF4A1A0A087X0R7 540 aa13.44□□□□□ -0.26
EFCAB11-209ENST00000556005 CEBPAP49715 358 aaPredicted RBP13.44□□□□□ -0.26
EFCAB11-209ENST00000556005 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
EFCAB11-209ENST00000556005 TERF2IPQ9NYB0 399 aa13.44□□□□□ -0.26
EFCAB11-209ENST00000556005 NSD2O96028 1365 aa13.43□□□□□ -0.26
EFCAB11-209ENST00000556005 SIRT1Q96EB6 747 aa13.43□□□□□ -0.26
EFCAB11-209ENST00000556005 USP32Q8NFA0 1604 aa13.43□□□□□ -0.26
EFCAB11-209ENST00000556005 UBR1Q8IWV7 1749 aa13.42□□□□□ -0.26
EFCAB11-209ENST00000556005 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
EFCAB11-209ENST00000556005 SETD1AO15047 1707 aaKnown RBP13.42□□□□□ -0.26
EFCAB11-209ENST00000556005 METP08581 1390 aa13.42□□□□□ -0.26
EFCAB11-209ENST00000556005 WAPLQ7Z5K2 1190 aa13.42□□□□□ -0.26
EFCAB11-209ENST00000556005 NRXN3Q9Y4C0 1643 aa13.41□□□□□ -0.26
EFCAB11-209ENST00000556005 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
EFCAB11-209ENST00000556005 IRX6P78412 446 aaPredicted RBP13.4□□□□□ -0.26
EFCAB11-209ENST00000556005 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
EFCAB11-209ENST00000556005 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
EFCAB11-209ENST00000556005 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
EFCAB11-209ENST00000556005 TXNDC2Q86VQ3 553 aa13.39□□□□□ -0.27
EFCAB11-209ENST00000556005 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
EFCAB11-209ENST00000556005 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
EFCAB11-209ENST00000556005 TNNT2P45379 298 aaPredicted RBP13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 RNF123Q5XPI4 1314 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 C3P01024 1663 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 PLEKHH1Q9ULM0 1364 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 TECPR2O15040 1411 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 LTKP29376 864 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 CABP1Q9NZU7 370 aa13.38□□□□□ -0.27
EFCAB11-209ENST00000556005 WASLO00401 505 aaPredicted RBP13.37□□□□□ -0.27
EFCAB11-209ENST00000556005 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
EFCAB11-209ENST00000556005 PPP4R2Q9NY27 417 aa13.36□□□□□ -0.27
EFCAB11-209ENST00000556005 MTHFSP49914 203 aa13.36□□□□□ -0.27
EFCAB11-209ENST00000556005 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
EFCAB11-209ENST00000556005 ADAMTS13Q76LX8 1427 aa13.35□□□□□ -0.27
EFCAB11-209ENST00000556005 CD163L1Q9NR16 1453 aa13.35□□□□□ -0.27
EFCAB11-209ENST00000556005 CDCA7LQ96GN5 454 aa13.35□□□□□ -0.27
EFCAB11-209ENST00000556005 KNDC1Q76NI1 1749 aa13.34□□□□□ -0.27
EFCAB11-209ENST00000556005 SLIT1O75093 1534 aa13.34□□□□□ -0.27
EFCAB11-209ENST00000556005 FYB1O15117 783 aa13.34□□□□□ -0.27
EFCAB11-209ENST00000556005 RCAN3Q9UKA8 241 aa13.33□□□□□ -0.27
EFCAB11-209ENST00000556005 CPS1P31327 1500 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 MED14O60244 1454 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 ATP7BP35670 1465 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 ARHGAP23Q9P227 1491 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 CCDC146Q8IYE0 955 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 GGNBP2Q9H3C7 697 aa13.33□□□□□ -0.28
EFCAB11-209ENST00000556005 GOLGA2Q08379 1002 aa13.32□□□□□ -0.28
EFCAB11-209ENST00000556005 TBX22Q9Y458 520 aa13.32□□□□□ -0.28
EFCAB11-209ENST00000556005 ZNF521Q96K83 1311 aa13.32□□□□□ -0.28
EFCAB11-209ENST00000556005 APAF1O14727 1248 aa13.31□□□□□ -0.28
EFCAB11-209ENST00000556005 CCDC61Q9Y6R9 512 aa13.31□□□□□ -0.28
EFCAB11-209ENST00000556005 NUDT16Q96DE0 195 aaKnown RBP13.31□□□□□ -0.28
EFCAB11-209ENST00000556005 SLC26A8Q96RN1 970 aa13.31□□□□□ -0.28
EFCAB11-209ENST00000556005 ROBO2Q9HCK4 1378 aa13.3□□□□□ -0.28
EFCAB11-209ENST00000556005 PPIP5K1Q6PFW1 1433 aa13.3□□□□□ -0.28
EFCAB11-209ENST00000556005 RRP1P56182 461 aaKnown RBP13.29□□□□□ -0.28
EFCAB11-209ENST00000556005 RUNDC1Q96C34 613 aa13.29□□□□□ -0.28
EFCAB11-209ENST00000556005 CPSF1Q10570 1443 aaKnown RBP13.28□□□□□ -0.28
EFCAB11-209ENST00000556005 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
EFCAB11-209ENST00000556005 AMOTL2Q9Y2J4 779 aa13.28□□□□□ -0.28
EFCAB11-209ENST00000556005 DUSP27Q5VZP5 1158 aa13.27□□□□□ -0.28
EFCAB11-209ENST00000556005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.27□□□□□ -0.28
EFCAB11-209ENST00000556005 EDC4Q6P2E9 1401 aaKnown RBP13.27□□□□□ -0.29
EFCAB11-209ENST00000556005 SLFN5Q08AF3 891 aa13.27□□□□□ -0.29
EFCAB11-209ENST00000556005 SHPRHQ149N8 1683 aa13.27□□□□□ -0.29
EFCAB11-209ENST00000556005 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
EFCAB11-209ENST00000556005 PTPRUQ92729 1446 aa13.26□□□□□ -0.29
EFCAB11-209ENST00000556005 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
EFCAB11-209ENST00000556005 E9PSI1 815 aa13.25□□□□□ -0.29
EFCAB11-209ENST00000556005 U2AF1L5P0DN76 240 aaPredicted RBP13.25□□□□□ -0.29
EFCAB11-209ENST00000556005 U2AF1Q01081 240 aaKnown RBP eCLIP13.25□□□□□ -0.29
EFCAB11-209ENST00000556005 NCBP3Q53F19 620 aaKnown RBP13.25□□□□□ -0.29
EFCAB11-209ENST00000556005 TRMT2AQ8IZ69 625 aaKnown RBP13.25□□□□□ -0.29
EFCAB11-209ENST00000556005 ADGRB2O60241 1585 aa13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 CEP170BQ9Y4F5 1589 aaPredicted RBP13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 RIMS1Q86UR5 1692 aaKnown RBP13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 TCP11L2Q8N4U5 519 aa13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 KIF20BQ96Q89 1820 aa13.24□□□□□ -0.29
EFCAB11-209ENST00000556005 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 B4GALNT3Q6L9W6 998 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 WWC1Q8IX03 1113 aa13.23□□□□□ -0.29
EFCAB11-209ENST00000556005 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms