RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
SIX1-205ENST00000555955 NUP153P49790 1475 aaKnown RBP18.19■□□□□ 0.5
SIX1-205ENST00000555955 MCM5P33992 734 aa18.19■□□□□ 0.5
SIX1-205ENST00000555955 KLHL40Q2TBA0 621 aa18.19■□□□□ 0.5
SIX1-205ENST00000555955 DAPK1P53355 1430 aa18.18■□□□□ 0.5
SIX1-205ENST00000555955 EPRSP07814 1512 aaKnown RBP18.17■□□□□ 0.5
SIX1-205ENST00000555955 FOXD4L1Q9NU39 408 aa18.16■□□□□ 0.5
SIX1-205ENST00000555955 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
SIX1-205ENST00000555955 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
SIX1-205ENST00000555955 SCAPERQ9BY12 1400 aa18.16■□□□□ 0.5
SIX1-205ENST00000555955 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
SIX1-205ENST00000555955 CCDC144AA2RUR9 1427 aa18.16■□□□□ 0.5
SIX1-205ENST00000555955 ZNF445P59923 1031 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 MYRIPQ8NFW9 859 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 SNX21Q969T3 373 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 RBSNQ9H1K0 784 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 E9PSI1 815 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 ATP2B3Q16720 1220 aa18.15■□□□□ 0.5
SIX1-205ENST00000555955 RWDD1Q9H446 243 aaPredicted RBP18.14■□□□□ 0.5
SIX1-205ENST00000555955 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
SIX1-205ENST00000555955 PLB1Q6P1J6 1458 aa18.14■□□□□ 0.49
SIX1-205ENST00000555955 PTPRGP23470 1445 aa18.14■□□□□ 0.49
SIX1-205ENST00000555955 TAF3Q5VWG9 929 aa18.14■□□□□ 0.49
SIX1-205ENST00000555955 ZNF710Q8N1W2 664 aa18.14■□□□□ 0.49
SIX1-205ENST00000555955 ABCC5O15440 1437 aa18.13■□□□□ 0.49
SIX1-205ENST00000555955 FAM177BA6PVY3 158 aa18.13■□□□□ 0.49
SIX1-205ENST00000555955 APAF1O14727 1248 aa18.13■□□□□ 0.49
SIX1-205ENST00000555955 SSFA2P28290 1259 aa18.13■□□□□ 0.49
SIX1-205ENST00000555955 DNTTIP2Q5QJE6 756 aaKnown RBP18.13■□□□□ 0.49
SIX1-205ENST00000555955 ADCY10Q96PN6 1610 aa18.12■□□□□ 0.49
SIX1-205ENST00000555955 SPDYE4A6NLX3 237 aa18.12■□□□□ 0.49
SIX1-205ENST00000555955 CDK11BP21127 795 aaKnown RBP18.12■□□□□ 0.49
SIX1-205ENST00000555955 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
SIX1-205ENST00000555955 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
SIX1-205ENST00000555955 ANKRD30AQ9BXX3 1397 aa18.12■□□□□ 0.49
SIX1-205ENST00000555955 PPP2R1AP30153 589 aa18.12■□□□□ 0.49
SIX1-205ENST00000555955 ZSCAN23Q3MJ62 389 aa18.11■□□□□ 0.49
SIX1-205ENST00000555955 CAMSAP2Q08AD1 1489 aa18.1■□□□□ 0.49
SIX1-205ENST00000555955 BAG4O95429 457 aaKnown RBP18.09■□□□□ 0.49
SIX1-205ENST00000555955 PRIM1P49642 420 aaKnown RBP18.09■□□□□ 0.49
SIX1-205ENST00000555955 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
SIX1-205ENST00000555955 CHMP4AQ9BY43 222 aa18.09■□□□□ 0.49
SIX1-205ENST00000555955 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
SIX1-205ENST00000555955 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
SIX1-205ENST00000555955 RBM25P49756 843 aaKnown RBP18.08■□□□□ 0.49
SIX1-205ENST00000555955 ARHGEF12Q9NZN5 1544 aa18.08■□□□□ 0.49
SIX1-205ENST00000555955 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.48
SIX1-205ENST00000555955 RIMBP3CA6NJZ7 1639 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 RIMBP3BA6NNM3 1639 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 RIMBP3Q9UFD9 1639 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 KIAA2012Q0VF49 1180 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 RLBP1P12271 317 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 FTSJ3Q8IY81 847 aaKnown RBP18.07■□□□□ 0.48
SIX1-205ENST00000555955 PRIMPOLQ96LW4 560 aa18.07■□□□□ 0.48
SIX1-205ENST00000555955 DISP3Q9P2K9 1392 aa18.06■□□□□ 0.48
SIX1-205ENST00000555955 HMGN5P82970 282 aaKnown RBP18.06■□□□□ 0.48
SIX1-205ENST00000555955 CLEC17AQ6ZS10 378 aa18.06■□□□□ 0.48
SIX1-205ENST00000555955 MCTP1Q6DN14 999 aa18.05■□□□□ 0.48
SIX1-205ENST00000555955 TNNQ9UQP3 1299 aa18.05■□□□□ 0.48
SIX1-205ENST00000555955 ZCCHC11Q5TAX3 1644 aaKnown RBP18.05■□□□□ 0.48
SIX1-205ENST00000555955 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
SIX1-205ENST00000555955 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
SIX1-205ENST00000555955 ARID3CA6NKF2 412 aa18.04■□□□□ 0.48
SIX1-205ENST00000555955 PTMAP06454 111 aaKnown RBP18.04■□□□□ 0.48
SIX1-205ENST00000555955 ZFP91Q96JP5 570 aaPredicted RBP18.04■□□□□ 0.48
SIX1-205ENST00000555955 ATP10BO94823 1461 aa18.04■□□□□ 0.48
SIX1-205ENST00000555955 CD2BP2O95400 341 aaKnown RBP18.04■□□□□ 0.48
SIX1-205ENST00000555955 GTF2F1P35269 517 aaKnown RBP eCLIP18.04■□□□□ 0.48
SIX1-205ENST00000555955 ZNF771Q7L3S4 317 aaPredicted RBP18.04■□□□□ 0.48
SIX1-205ENST00000555955 KIF3AQ9Y496 699 aa18.04■□□□□ 0.48
SIX1-205ENST00000555955 COL17A1Q9UMD9 1497 aaPredicted RBP18.03■□□□□ 0.48
SIX1-205ENST00000555955 NBPF1Q3BBV0 1214 aa18.03■□□□□ 0.48
SIX1-205ENST00000555955 K7ELQ4 463 aaPredicted RBP18.03■□□□□ 0.48
SIX1-205ENST00000555955 KNSTRNQ9Y448 316 aa18.03■□□□□ 0.48
SIX1-205ENST00000555955 CERS3Q8IU89 383 aa18.02■□□□□ 0.47
SIX1-205ENST00000555955 PDCL2Q8N4E4 241 aa18.02■□□□□ 0.47
SIX1-205ENST00000555955 TESK2Q96S53 571 aa18.02■□□□□ 0.47
SIX1-205ENST00000555955 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
SIX1-205ENST00000555955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18■□□□□ 0.47
SIX1-205ENST00000555955 RARSP54136 660 aaKnown RBP18■□□□□ 0.47
SIX1-205ENST00000555955 MPNDQ8N594 471 aa18■□□□□ 0.47
SIX1-205ENST00000555955 LMBRD1Q9NUN5 540 aa18■□□□□ 0.47
SIX1-205ENST00000555955 TMF1P82094 1093 aa17.99■□□□□ 0.47
SIX1-205ENST00000555955 BCL2L13Q9BXK5 485 aa17.99■□□□□ 0.47
SIX1-205ENST00000555955 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
SIX1-205ENST00000555955 KIF2CQ99661 725 aa17.99■□□□□ 0.47
SIX1-205ENST00000555955 RBM27Q9P2N5 1060 aaKnown RBP17.99■□□□□ 0.47
SIX1-205ENST00000555955 KCNJ4P48050 445 aa17.98■□□□□ 0.47
SIX1-205ENST00000555955 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.47
SIX1-205ENST00000555955 IRX5P78411 483 aaPredicted RBP17.98■□□□□ 0.47
SIX1-205ENST00000555955 TROQ12816 1431 aaPredicted RBP17.97■□□□□ 0.47
SIX1-205ENST00000555955 RNF214Q8ND24 703 aa17.97■□□□□ 0.47
SIX1-205ENST00000555955 LRSAM1Q6UWE0 723 aa17.96■□□□□ 0.47
SIX1-205ENST00000555955 AK9Q5TCS8 1911 aa17.96■□□□□ 0.47
SIX1-205ENST00000555955 NOLC1Q14978 699 aaKnown RBP eCLIP17.96■□□□□ 0.47
SIX1-205ENST00000555955 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
SIX1-205ENST00000555955 ERBINQ96RT1 1412 aa17.96■□□□□ 0.47
SIX1-205ENST00000555955 SYCE3A1L190 88 aa17.95■□□□□ 0.46
SIX1-205ENST00000555955 ARHGAP31Q2M1Z3 1444 aa17.95■□□□□ 0.46
SIX1-205ENST00000555955 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms