RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 TTC37Q6PGP7 1564 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 KANK1Q14678 1352 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 KDM5AP29375 1690 aaKnown RBP9.81□□□□□ -0.84
CHD8-209ENST00000555935 DDIT3P35638 169 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 NCBP3Q53F19 620 aaKnown RBP9.81□□□□□ -0.84
CHD8-209ENST00000555935 SPRYD3Q8NCJ5 442 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 SNX21Q969T3 373 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 JPH4Q96JJ6 628 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 GBP4Q96PP9 640 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 PHF23Q9BUL5 403 aaPredicted RBP9.81□□□□□ -0.84
CHD8-209ENST00000555935 PDCL3Q9H2J4 239 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 ERBB4Q15303 1308 aa9.81□□□□□ -0.84
CHD8-209ENST00000555935 RLBP1P12271 317 aa9.8□□□□□ -0.84
CHD8-209ENST00000555935 SYCP2Q9BX26 1530 aa9.8□□□□□ -0.84
CHD8-209ENST00000555935 CDC42BPBQ9Y5S2 1711 aa9.8□□□□□ -0.84
CHD8-209ENST00000555935 MFAP1P55081 439 aaKnown RBP9.79□□□□□ -0.84
CHD8-209ENST00000555935 MVPQ14764 893 aaKnown RBP9.79□□□□□ -0.84
CHD8-209ENST00000555935 CCDC27Q2M243 656 aa9.79□□□□□ -0.84
CHD8-209ENST00000555935 SMC5Q8IY18 1101 aa9.79□□□□□ -0.84
CHD8-209ENST00000555935 RUNDC1Q96C34 613 aa9.79□□□□□ -0.84
CHD8-209ENST00000555935 IQSEC2Q5JU85 1478 aa9.79□□□□□ -0.84
CHD8-209ENST00000555935 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
CHD8-209ENST00000555935 CHMP7Q8WUX9 453 aaPredicted RBP9.79□□□□□ -0.84
CHD8-209ENST00000555935 RBM25P49756 843 aaKnown RBP9.78□□□□□ -0.84
CHD8-209ENST00000555935 CCDC173Q0VFZ6 552 aa9.78□□□□□ -0.84
CHD8-209ENST00000555935 CT47B1P0C2W7 299 aaPredicted RBP9.78□□□□□ -0.84
CHD8-209ENST00000555935 TERF1P54274 439 aa9.78□□□□□ -0.84
CHD8-209ENST00000555935 HDAC1Q13547 482 aaPredicted RBP9.78□□□□□ -0.84
CHD8-209ENST00000555935 PPP1R9BQ96SB3 815 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 TRPM2O94759 1503 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 CEP152O94986 1710 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 RAB3GAP1Q15042 981 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 ZKSCAN2Q63HK3 967 aa9.77□□□□□ -0.85
CHD8-209ENST00000555935 TNPO1Q92973 898 aaKnown RBP9.76□□□□□ -0.85
CHD8-209ENST00000555935 IBTKQ9P2D0 1353 aaPredicted RBP9.76□□□□□ -0.85
CHD8-209ENST00000555935 ARHGAP5Q13017 1502 aa9.76□□□□□ -0.85
CHD8-209ENST00000555935 ERVK-7P63135 1459 aa9.76□□□□□ -0.85
CHD8-209ENST00000555935 ZSCAN30Q86W11 494 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 GAS2L3Q86XJ1 694 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
CHD8-209ENST00000555935 DZIP1LQ8IYY4 767 aaKnown RBP9.75□□□□□ -0.85
CHD8-209ENST00000555935 TCP11L2Q8N4U5 519 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 ANP32BQ92688 251 aaKnown RBP9.75□□□□□ -0.85
CHD8-209ENST00000555935 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 TNNQ9UQP3 1299 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 SHROOM2Q13796 1616 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
CHD8-209ENST00000555935 MAP7D2Q96T17 732 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 PTPRTO14522 1441 aa9.75□□□□□ -0.85
CHD8-209ENST00000555935 ERCC6Q03468 1493 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 OFD1O75665 1012 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
CHD8-209ENST00000555935 KIAA1211Q6ZU35 1233 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 DDX19BQ9UMR2 479 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 SBNO2Q9Y2G9 1366 aa9.74□□□□□ -0.85
CHD8-209ENST00000555935 CALD1Q05682 793 aaKnown RBP9.74□□□□□ -0.85
CHD8-209ENST00000555935 GOLGA6L22H0YM25 854 aa9.73□□□□□ -0.85
CHD8-209ENST00000555935 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
CHD8-209ENST00000555935 CLEC17AQ6ZS10 378 aa9.73□□□□□ -0.85
CHD8-209ENST00000555935 BCL2L13Q9BXK5 485 aa9.73□□□□□ -0.85
CHD8-209ENST00000555935 ADGRL1O94910 1474 aa9.73□□□□□ -0.85
CHD8-209ENST00000555935 NASPP49321 788 aaPredicted RBP9.72□□□□□ -0.85
CHD8-209ENST00000555935 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 MSNP26038 577 aaKnown RBP9.72□□□□□ -0.85
CHD8-209ENST00000555935 MORC1Q86VD1 984 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 CFAP53Q96M91 514 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 RRP7AQ9Y3A4 280 aaKnown RBP9.72□□□□□ -0.85
CHD8-209ENST00000555935 ARHGAP31Q2M1Z3 1444 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 KIF16BQ96L93 1317 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 MYOM2P54296 1465 aa9.72□□□□□ -0.85
CHD8-209ENST00000555935 KLHL40Q2TBA0 621 aa9.71□□□□□ -0.86
CHD8-209ENST00000555935 ZNF518AQ6AHZ1 1483 aa9.71□□□□□ -0.86
CHD8-209ENST00000555935 CLTCL1P53675 1640 aa9.7□□□□□ -0.86
CHD8-209ENST00000555935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
CHD8-209ENST00000555935 K7ELQ4 463 aaPredicted RBP9.7□□□□□ -0.86
CHD8-209ENST00000555935 NUCB1Q02818 461 aa9.7□□□□□ -0.86
CHD8-209ENST00000555935 BMP2KLQ5H9B9 411 aa9.7□□□□□ -0.86
CHD8-209ENST00000555935 MYO3AQ8NEV4 1616 aa9.7□□□□□ -0.86
CHD8-209ENST00000555935 NSD3Q9BZ95 1437 aa9.7□□□□□ -0.86
CHD8-209ENST00000555935 ATF7IPQ6VMQ6 1270 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 SMC4Q9NTJ3 1288 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 USP32Q8NFA0 1604 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 TRIM27P14373 513 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 ZNF445P59923 1031 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 MTERF4Q7Z6M4 381 aaKnown RBP9.69□□□□□ -0.86
CHD8-209ENST00000555935 ADGRB2O60241 1585 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 FBLN2P98095 1184 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 ITPRIPQ8IWB1 547 aa9.69□□□□□ -0.86
CHD8-209ENST00000555935 ZNF500O60304 480 aaPredicted RBP9.68□□□□□ -0.86
CHD8-209ENST00000555935 ZBTB40Q9NUA8 1239 aa9.68□□□□□ -0.86
CHD8-209ENST00000555935 MAP3K4Q9Y6R4 1608 aa9.68□□□□□ -0.86
CHD8-209ENST00000555935 RIPK4P57078 832 aa9.68□□□□□ -0.86
CHD8-209ENST00000555935 KIF2CQ99661 725 aa9.68□□□□□ -0.86
CHD8-209ENST00000555935 DDX49Q9Y6V7 483 aaKnown RBP9.68□□□□□ -0.86
CHD8-209ENST00000555935 ABCC11Q96J66 1382 aa9.67□□□□□ -0.86
CHD8-209ENST00000555935 CHD1LQ86WJ1 897 aa9.67□□□□□ -0.86
CHD8-209ENST00000555935 NOL7Q9UMY1 257 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms