RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 RRP7BPQ9NSQ0 103 aa13.13□□□□□ -0.31
EFCAB11-208ENST00000555872 TPM2P07951 284 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 ARHGAP5Q13017 1502 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 ASXL2Q76L83 1435 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 KIAA1107Q9UPP5 1409 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 MPNDQ8N594 471 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 SLKQ9H2G2 1235 aaPredicted RBP13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 PRR29P0C7W0 189 aa13.12□□□□□ -0.31
EFCAB11-208ENST00000555872 MBD5Q9P267 1494 aa13.11□□□□□ -0.31
EFCAB11-208ENST00000555872 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
EFCAB11-208ENST00000555872 ZNF644Q9H582 1327 aaPredicted RBP13.11□□□□□ -0.31
EFCAB11-208ENST00000555872 GOLGA6L3A6NEY3 463 aa13.11□□□□□ -0.31
EFCAB11-208ENST00000555872 KTN1Q86UP2 1357 aaKnown RBP13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 NPM1P06748 294 aaKnown RBP eCLIP13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 PTPRTO14522 1441 aa13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 ANAPC15P60006 121 aa13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 SH3BP1Q9Y3L3 701 aa13.1□□□□□ -0.31
EFCAB11-208ENST00000555872 LRPPRCP42704 1394 aaKnown RBP13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 CCDC141Q6ZP82 1450 aa13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 GZF1Q9H116 711 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 KDM2BQ8NHM5 1336 aa13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 DENND4BO75064 1496 aaPredicted RBP13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 EGFL6Q8IUX8 553 aa13.09□□□□□ -0.31
EFCAB11-208ENST00000555872 IRF6O14896 467 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 ARID3AQ99856 593 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 ABCC1P33527 1531 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
EFCAB11-208ENST00000555872 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
EFCAB11-208ENST00000555872 GPATCH11Q8N954 259 aa13.07□□□□□ -0.32
EFCAB11-208ENST00000555872 SYCP2Q9BX26 1530 aa13.07□□□□□ -0.32
EFCAB11-208ENST00000555872 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
EFCAB11-208ENST00000555872 CC2D1BQ5T0F9 858 aaKnown RBP13.07□□□□□ -0.32
EFCAB11-208ENST00000555872 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
EFCAB11-208ENST00000555872 ZNF777Q9ULD5 760 aaPredicted RBP13.06□□□□□ -0.32
EFCAB11-208ENST00000555872 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
EFCAB11-208ENST00000555872 C9orf84Q5VXU9 1444 aa13.06□□□□□ -0.32
EFCAB11-208ENST00000555872 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
EFCAB11-208ENST00000555872 EFCAB2Q5VUJ9 269 aa13.05□□□□□ -0.32
EFCAB11-208ENST00000555872 FSD2A1L4K1 749 aa13.05□□□□□ -0.32
EFCAB11-208ENST00000555872 ESPNB1AK53 854 aa13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 ZSCAN20P17040 1043 aaPredicted RBP13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 BCORL1Q5H9F3 1711 aa13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 KIF20AO95235 890 aa13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 TNNT2P45379 298 aaPredicted RBP13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 EP400NLQ6ZTU2 488 aa13.04□□□□□ -0.32
EFCAB11-208ENST00000555872 SETQ01105 290 aaPredicted RBP13.03□□□□□ -0.32
EFCAB11-208ENST00000555872 SEMA3FQ13275 785 aa13.03□□□□□ -0.32
EFCAB11-208ENST00000555872 BECN1Q14457 450 aa13.03□□□□□ -0.32
EFCAB11-208ENST00000555872 ERBB4Q15303 1308 aa13.03□□□□□ -0.32
EFCAB11-208ENST00000555872 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
EFCAB11-208ENST00000555872 BRD4O60885 1362 aaPredicted RBP13.02□□□□□ -0.32
EFCAB11-208ENST00000555872 TSPY4P0CV99 314 aa13.02□□□□□ -0.32
EFCAB11-208ENST00000555872 TSPY10P0CW01 314 aa13.02□□□□□ -0.32
EFCAB11-208ENST00000555872 MYBBP1AQ9BQG0 1328 aaKnown RBP13.02□□□□□ -0.33
EFCAB11-208ENST00000555872 PTPRMP28827 1452 aa13.02□□□□□ -0.33
EFCAB11-208ENST00000555872 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
EFCAB11-208ENST00000555872 MYH16Q9H6N6 1097 aa13.02□□□□□ -0.33
EFCAB11-208ENST00000555872 FANCAO15360 1455 aa13.01□□□□□ -0.33
EFCAB11-208ENST00000555872 ARHGEF12Q9NZN5 1544 aa13.01□□□□□ -0.33
EFCAB11-208ENST00000555872 USP19O94966 1318 aa13.01□□□□□ -0.33
EFCAB11-208ENST00000555872 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
EFCAB11-208ENST00000555872 HNRNPMP52272 730 aaKnown RBP eCLIP13□□□□□ -0.33
EFCAB11-208ENST00000555872 RALBP1Q15311 655 aa13□□□□□ -0.33
EFCAB11-208ENST00000555872 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 KIF15Q9NS87 1388 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 USP47Q96K76 1375 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 PREX1Q8TCU6 1659 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 MRE11P49959 708 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
EFCAB11-208ENST00000555872 SEC24BO95487 1268 aa12.98□□□□□ -0.33
EFCAB11-208ENST00000555872 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
EFCAB11-208ENST00000555872 ANKRD50Q9ULJ7 1429 aa12.98□□□□□ -0.33
EFCAB11-208ENST00000555872 TRIM44Q96DX7 344 aaPredicted RBP12.98□□□□□ -0.33
EFCAB11-208ENST00000555872 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 RPRD2Q5VT52 1461 aaKnown RBP12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 KIAA1211Q6ZU35 1233 aa12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 CD109Q6YHK3 1445 aa12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 SPRYD3Q8NCJ5 442 aa12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 INO80Q9ULG1 1556 aaPredicted RBP12.97□□□□□ -0.33
EFCAB11-208ENST00000555872 DUOX2Q9NRD8 1548 aa12.96□□□□□ -0.33
EFCAB11-208ENST00000555872 NEO1Q92859 1461 aa12.96□□□□□ -0.33
EFCAB11-208ENST00000555872 MCM4P33991 863 aa12.96□□□□□ -0.33
EFCAB11-208ENST00000555872 GRPEL1Q9HAV7 217 aa12.96□□□□□ -0.33
EFCAB11-208ENST00000555872 IRX5P78411 483 aaPredicted RBP12.96□□□□□ -0.34
EFCAB11-208ENST00000555872 TAF3Q5VWG9 929 aa12.96□□□□□ -0.34
EFCAB11-208ENST00000555872 ANKRD30BQ9BXX2 1392 aa12.96□□□□□ -0.34
EFCAB11-208ENST00000555872 ZFYVE16Q7Z3T8 1539 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 TRAK2O60296 914 aa12.95□□□□□ -0.34
EFCAB11-208ENST00000555872 NBPF20Q3BBV1 942 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms