RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 FHAD1B1AJZ9 1412 aa7.16□□□□□ -1.26
CPSF2-204ENST00000555244 NUP160Q12769 1436 aa7.16□□□□□ -1.26
CPSF2-204ENST00000555244 PBRM1Q86U86 1689 aa7.16□□□□□ -1.26
CPSF2-204ENST00000555244 MDM2Q00987 491 aaPredicted RBP7.15□□□□□ -1.26
CPSF2-204ENST00000555244 SWT1Q5T5J6 900 aaKnown RBP7.15□□□□□ -1.26
CPSF2-204ENST00000555244 ITGBL1O95965 494 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-204ENST00000555244 KCNC4Q03721 635 aa7.14□□□□□ -1.27
CPSF2-204ENST00000555244 GRIN2AQ12879 1464 aa7.14□□□□□ -1.27
CPSF2-204ENST00000555244 ADAMTS12P58397 1594 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 IGF1RP08069 1367 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.13□□□□□ -1.27
CPSF2-204ENST00000555244 A0A0G2JS52 829 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 IFFO2Q5TF58 517 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 ERICH6Q7L0X2 663 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 EYA1Q99502 592 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CPSF2-204ENST00000555244 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
CPSF2-204ENST00000555244 TMUB1Q9BVT8 246 aa7.12□□□□□ -1.27
CPSF2-204ENST00000555244 KIF27Q86VH2 1401 aa7.11□□□□□ -1.27
CPSF2-204ENST00000555244 DNAJB2P25686 324 aa7.11□□□□□ -1.27
CPSF2-204ENST00000555244 SSTR3P32745 418 aaPredicted RBP7.11□□□□□ -1.27
CPSF2-204ENST00000555244 REPIN1Q9BWE0 567 aaKnown RBP7.11□□□□□ -1.27
CPSF2-204ENST00000555244 RCCD1A6NED2 376 aa7.1□□□□□ -1.27
CPSF2-204ENST00000555244 MS4A1P11836 297 aa7.1□□□□□ -1.27
CPSF2-204ENST00000555244 APLP1P51693 650 aa7.1□□□□□ -1.27
CPSF2-204ENST00000555244 CYB5RLQ6IPT4 315 aa7.1□□□□□ -1.27
CPSF2-204ENST00000555244 SLF2Q8IX21 1173 aa7.1□□□□□ -1.27
CPSF2-204ENST00000555244 CEP170Q5SW79 1584 aa7.09□□□□□ -1.27
CPSF2-204ENST00000555244 SLC4A3P48751 1232 aa7.09□□□□□ -1.27
CPSF2-204ENST00000555244 NLRP7Q8WX94 980 aa7.09□□□□□ -1.27
CPSF2-204ENST00000555244 MTRQ99707 1265 aa7.09□□□□□ -1.27
CPSF2-204ENST00000555244 FAM217BQ9NTX9 383 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-204ENST00000555244 SHROOM2Q13796 1616 aa7.09□□□□□ -1.28
CPSF2-204ENST00000555244 PLEKHG3A1L390 1219 aa7.08□□□□□ -1.28
CPSF2-204ENST00000555244 TJAP1Q5JTD0 557 aa7.08□□□□□ -1.28
CPSF2-204ENST00000555244 SULF1Q8IWU6 871 aa7.08□□□□□ -1.28
CPSF2-204ENST00000555244 RSPH6AQ9H0K4 717 aa7.08□□□□□ -1.28
CPSF2-204ENST00000555244 GOPCQ9HD26 462 aa7.08□□□□□ -1.28
CPSF2-204ENST00000555244 COPS2P61201 443 aa7.07□□□□□ -1.28
CPSF2-204ENST00000555244 ZNF516Q92618 1163 aa7.07□□□□□ -1.28
CPSF2-204ENST00000555244 BEGAINQ9BUH8 593 aa7.07□□□□□ -1.28
CPSF2-204ENST00000555244 DIXDC1Q155Q3 683 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 RSPH4AQ5TD94 716 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 TMEM134Q9H6X4 195 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 IL21Q9HBE4 155 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 CARMIL1Q5VZK9 1371 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 KIAA0586Q9BVV6 1533 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 CUL7Q14999 1698 aa7.06□□□□□ -1.28
CPSF2-204ENST00000555244 NECTIN2Q92692 538 aa7.05□□□□□ -1.28
CPSF2-204ENST00000555244 PCMTD1Q96MG8 357 aaPredicted RBP7.04□□□□□ -1.28
CPSF2-204ENST00000555244 RUSC2Q8N2Y8 1516 aa7.03□□□□□ -1.28
CPSF2-204ENST00000555244 DDX11L8A8MPP1 907 aa7.03□□□□□ -1.28
CPSF2-204ENST00000555244 SH3D19Q5HYK7 790 aa7.03□□□□□ -1.28
CPSF2-204ENST00000555244 NKX2-3Q8TAU0 364 aa7.03□□□□□ -1.28
CPSF2-204ENST00000555244 ATP1B4Q9UN42 357 aaPredicted RBP7.03□□□□□ -1.28
CPSF2-204ENST00000555244 ERCC6L2Q5T890 1561 aa7.03□□□□□ -1.28
CPSF2-204ENST00000555244 PRG4Q92954 1404 aaPredicted RBP7.02□□□□□ -1.29
CPSF2-204ENST00000555244 RGS20O76081 388 aa7.02□□□□□ -1.29
CPSF2-204ENST00000555244 RDH13Q8NBN7 331 aa7.02□□□□□ -1.29
CPSF2-204ENST00000555244 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.29
CPSF2-204ENST00000555244 CFHP08603 1231 aa7.01□□□□□ -1.29
CPSF2-204ENST00000555244 CD46P15529 392 aa7.01□□□□□ -1.29
CPSF2-204ENST00000555244 SKIV2LQ15477 1246 aaKnown RBP7.01□□□□□ -1.29
CPSF2-204ENST00000555244 PPP1R18Q6NYC8 613 aa7.01□□□□□ -1.29
CPSF2-204ENST00000555244 NUTM1Q86Y26 1132 aa7.01□□□□□ -1.29
CPSF2-204ENST00000555244 SLC10A3P09131 477 aa7□□□□□ -1.29
CPSF2-204ENST00000555244 BLOC1S3Q6QNY0 202 aa7□□□□□ -1.29
CPSF2-204ENST00000555244 C14orf37Q86TY3 774 aa7□□□□□ -1.29
CPSF2-204ENST00000555244 PRR14Q9BWN1 585 aa7□□□□□ -1.29
CPSF2-204ENST00000555244 IRX2Q9BZI1 471 aaPredicted RBP7□□□□□ -1.29
CPSF2-204ENST00000555244 PRXQ9BXM0 1461 aa6.99□□□□□ -1.29
CPSF2-204ENST00000555244 RAPGEF2Q9Y4G8 1499 aa6.99□□□□□ -1.29
CPSF2-204ENST00000555244 ZPR1O75312 459 aa6.99□□□□□ -1.29
CPSF2-204ENST00000555244 KMT5BQ4FZB7 885 aa6.99□□□□□ -1.29
CPSF2-204ENST00000555244 TBC1D2Q9BYX2 928 aa6.99□□□□□ -1.29
CPSF2-204ENST00000555244 TLL1O43897 1013 aa6.97□□□□□ -1.29
CPSF2-204ENST00000555244 CLK2P49760 499 aaKnown RBP6.97□□□□□ -1.29
CPSF2-204ENST00000555244 MYSM1Q5VVJ2 828 aa6.97□□□□□ -1.29
CPSF2-204ENST00000555244 SPIRE2Q8WWL2 714 aa6.97□□□□□ -1.29
CPSF2-204ENST00000555244 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.97□□□□□ -1.29
CPSF2-204ENST00000555244 POLR3EQ9NVU0 708 aa6.97□□□□□ -1.29
CPSF2-204ENST00000555244 TIMELESSQ9UNS1 1208 aa6.97□□□□□ -1.29
CPSF2-204ENST00000555244 UGGT2Q9NYU1 1516 aa6.96□□□□□ -1.29
CPSF2-204ENST00000555244 ACTN4O43707 911 aaKnown RBP6.96□□□□□ -1.3
CPSF2-204ENST00000555244 USP46P62068 366 aa6.96□□□□□ -1.3
CPSF2-204ENST00000555244 PRKD2Q9BZL6 878 aa6.96□□□□□ -1.3
CPSF2-204ENST00000555244 TNIKQ9UKE5 1360 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 IQGAP2Q13576 1575 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 EEA1Q15075 1411 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 CARMIL2Q6F5E8 1435 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 KDM4AO75164 1064 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 GCGRP47871 477 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 PUS10Q3MIT2 529 aaKnown RBP6.95□□□□□ -1.3
CPSF2-204ENST00000555244 RIC3Q7Z5B4 369 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 DISP1Q96F81 1524 aa6.95□□□□□ -1.3
CPSF2-204ENST00000555244 PTPRGP23470 1445 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 UHRF1BP1LA0JNW5 1464 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 GJA5P36382 358 aa6.94□□□□□ -1.3
CPSF2-204ENST00000555244 GGCXP38435 758 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms