RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 POLR3AO14802 1390 aaPredicted RBP20.48■□□□□ 0.87
MARK3-209ENST00000555235 SBNO2Q9Y2G9 1366 aa20.48■□□□□ 0.87
MARK3-209ENST00000555235 MYO3AQ8NEV4 1616 aa20.47■□□□□ 0.87
MARK3-209ENST00000555235 AAMPQ13685 434 aa20.47■□□□□ 0.87
MARK3-209ENST00000555235 NRXN1Q9ULB1 1477 aa20.47■□□□□ 0.87
MARK3-209ENST00000555235 IFT172Q9UG01 1749 aa20.47■□□□□ 0.87
MARK3-209ENST00000555235 ANTXR1Q9H6X2 564 aa20.47■□□□□ 0.87
MARK3-209ENST00000555235 FANCAO15360 1455 aa20.46■□□□□ 0.87
MARK3-209ENST00000555235 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
MARK3-209ENST00000555235 SEC24BO95487 1268 aa20.46■□□□□ 0.87
MARK3-209ENST00000555235 KIF1BO60333 1816 aa20.45■□□□□ 0.86
MARK3-209ENST00000555235 CENPJQ9HC77 1338 aaPredicted RBP20.45■□□□□ 0.86
MARK3-209ENST00000555235 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
MARK3-209ENST00000555235 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
MARK3-209ENST00000555235 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
MARK3-209ENST00000555235 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
MARK3-209ENST00000555235 RRAGDQ9NQL2 400 aaPredicted RBP20.42■□□□□ 0.86
MARK3-209ENST00000555235 MROH2AA6NES4 1674 aa20.42■□□□□ 0.86
MARK3-209ENST00000555235 TBC1D32Q96NH3 1257 aa20.41■□□□□ 0.86
MARK3-209ENST00000555235 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
MARK3-209ENST00000555235 COG6Q9Y2V7 657 aa20.4■□□□□ 0.86
MARK3-209ENST00000555235 SETBP1Q9Y6X0 1596 aa20.4■□□□□ 0.86
MARK3-209ENST00000555235 SHPRHQ149N8 1683 aa20.4■□□□□ 0.86
MARK3-209ENST00000555235 ASXL2Q76L83 1435 aa20.39■□□□□ 0.86
MARK3-209ENST00000555235 LMTK2Q8IWU2 1503 aa20.39■□□□□ 0.85
MARK3-209ENST00000555235 PPRC1Q5VV67 1664 aaKnown RBP20.39■□□□□ 0.85
MARK3-209ENST00000555235 NSD3Q9BZ95 1437 aa20.38■□□□□ 0.85
MARK3-209ENST00000555235 GOLGA6L3A6NEY3 463 aa20.38■□□□□ 0.85
MARK3-209ENST00000555235 PANK1Q8TE04 598 aa20.38■□□□□ 0.85
MARK3-209ENST00000555235 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
MARK3-209ENST00000555235 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
MARK3-209ENST00000555235 NOS1P29475 1434 aa20.37■□□□□ 0.85
MARK3-209ENST00000555235 MORC1Q86VD1 984 aa20.37■□□□□ 0.85
MARK3-209ENST00000555235 RUNDC1Q96C34 613 aa20.36■□□□□ 0.85
MARK3-209ENST00000555235 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
MARK3-209ENST00000555235 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
MARK3-209ENST00000555235 FSD2A1L4K1 749 aa20.36■□□□□ 0.85
MARK3-209ENST00000555235 ZC3H13Q5T200 1668 aaKnown RBP20.34■□□□□ 0.85
MARK3-209ENST00000555235 KIDINS220Q9ULH0 1771 aa20.33■□□□□ 0.85
MARK3-209ENST00000555235 XRCC6P12956 609 aaKnown RBP eCLIP20.33■□□□□ 0.85
MARK3-209ENST00000555235 RARSP54136 660 aaKnown RBP20.33■□□□□ 0.85
MARK3-209ENST00000555235 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.84
MARK3-209ENST00000555235 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.84
MARK3-209ENST00000555235 MCM4P33991 863 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 CLCN1P35523 988 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 GLIPR1L2Q4G1C9 344 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 WDR63Q8IWG1 891 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 TCP11L2Q8N4U5 519 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 TRAK1Q9UPV9 953 aa20.32■□□□□ 0.84
MARK3-209ENST00000555235 ADGRB1O14514 1584 aa20.31■□□□□ 0.84
MARK3-209ENST00000555235 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
MARK3-209ENST00000555235 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
MARK3-209ENST00000555235 RWDD1Q9H446 243 aaPredicted RBP20.3■□□□□ 0.84
MARK3-209ENST00000555235 PDZRN3Q9UPQ7 1066 aa20.3■□□□□ 0.84
MARK3-209ENST00000555235 RRP7AQ9Y3A4 280 aaKnown RBP20.3■□□□□ 0.84
MARK3-209ENST00000555235 NEUROD2Q15784 382 aa20.29■□□□□ 0.84
MARK3-209ENST00000555235 ZNF518AQ6AHZ1 1483 aa20.29■□□□□ 0.84
MARK3-209ENST00000555235 PNNQ9H307 717 aaKnown RBP20.29■□□□□ 0.84
MARK3-209ENST00000555235 PPLO60437 1756 aa20.29■□□□□ 0.84
MARK3-209ENST00000555235 TNNT2P45379 298 aaPredicted RBP20.29■□□□□ 0.84
MARK3-209ENST00000555235 CCDC27Q2M243 656 aa20.29■□□□□ 0.84
MARK3-209ENST00000555235 CHMP5Q9NZZ3 219 aa20.29■□□□□ 0.84
MARK3-209ENST00000555235 PCDHB15Q9Y5E8 787 aa20.28■□□□□ 0.84
MARK3-209ENST00000555235 CHGAP10645 457 aaKnown RBP20.28■□□□□ 0.84
MARK3-209ENST00000555235 FAM69CQ0P6D2 419 aa20.27■□□□□ 0.84
MARK3-209ENST00000555235 NCBP3Q53F19 620 aaKnown RBP20.27■□□□□ 0.84
MARK3-209ENST00000555235 MRE11P49959 708 aa20.27■□□□□ 0.83
MARK3-209ENST00000555235 RLBP1P12271 317 aa20.26■□□□□ 0.83
MARK3-209ENST00000555235 MTHFSP49914 203 aa20.26■□□□□ 0.83
MARK3-209ENST00000555235 ISY1Q9ULR0 285 aaKnown RBP20.26■□□□□ 0.83
MARK3-209ENST00000555235 NPATQ14207 1427 aa20.26■□□□□ 0.83
MARK3-209ENST00000555235 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
MARK3-209ENST00000555235 RPGRIP1LQ68CZ1 1315 aa20.25■□□□□ 0.83
MARK3-209ENST00000555235 CFAP53Q96M91 514 aa20.24■□□□□ 0.83
MARK3-209ENST00000555235 NAP1L5Q96NT1 182 aaPredicted RBP20.24■□□□□ 0.83
MARK3-209ENST00000555235 PUS7Q96PZ0 661 aaKnown RBP20.24■□□□□ 0.83
MARK3-209ENST00000555235 TRAK2O60296 914 aa20.24■□□□□ 0.83
MARK3-209ENST00000555235 TRHP20396 242 aaPredicted RBP20.24■□□□□ 0.83
MARK3-209ENST00000555235 TMEM132EQ6IEE7 984 aa20.24■□□□□ 0.83
MARK3-209ENST00000555235 DDX11L8A8MPP1 907 aa20.23■□□□□ 0.83
MARK3-209ENST00000555235 ARXQ96QS3 562 aa20.23■□□□□ 0.83
MARK3-209ENST00000555235 C22orf23Q9BZE7 217 aa20.23■□□□□ 0.83
MARK3-209ENST00000555235 PANK2Q9BZ23 570 aa20.22■□□□□ 0.83
MARK3-209ENST00000555235 GZF1Q9H116 711 aaPredicted RBP20.22■□□□□ 0.83
MARK3-209ENST00000555235 NSD2O96028 1365 aa20.21■□□□□ 0.83
MARK3-209ENST00000555235 MYH16Q9H6N6 1097 aa20.2■□□□□ 0.82
MARK3-209ENST00000555235 FRMPD1Q5SYB0 1578 aa20.2■□□□□ 0.82
MARK3-209ENST00000555235 ANKRD36BQ8N2N9 1353 aa20.19■□□□□ 0.82
MARK3-209ENST00000555235 BCL2L13Q9BXK5 485 aa20.19■□□□□ 0.82
MARK3-209ENST00000555235 HSP90AA1P07900 732 aaKnown RBP20.19■□□□□ 0.82
MARK3-209ENST00000555235 MVPQ14764 893 aaKnown RBP20.19■□□□□ 0.82
MARK3-209ENST00000555235 SPRYD3Q8NCJ5 442 aa20.19■□□□□ 0.82
MARK3-209ENST00000555235 ADGRB2O60241 1585 aa20.18■□□□□ 0.82
MARK3-209ENST00000555235 RRP9O43818 475 aaKnown RBP20.18■□□□□ 0.82
MARK3-209ENST00000555235 TULP4Q9NRJ4 1543 aa20.18■□□□□ 0.82
MARK3-209ENST00000555235 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
MARK3-209ENST00000555235 GLI2P10070 1586 aa20.18■□□□□ 0.82
MARK3-209ENST00000555235 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
MARK3-209ENST00000555235 GRPEL1Q9HAV7 217 aa20.17■□□□□ 0.82
MARK3-209ENST00000555235 HECW2Q9P2P5 1572 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms