RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 ARHGEF12Q9NZN5 1544 aa15.52■□□□□ 0.08
ARHGEF40-206ENST00000555232 SPINK5Q9NQ38 1064 aaPredicted RBP15.52■□□□□ 0.07
ARHGEF40-206ENST00000555232 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.07
ARHGEF40-206ENST00000555232 WWC1Q8IX03 1113 aa15.51■□□□□ 0.07
ARHGEF40-206ENST00000555232 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
ARHGEF40-206ENST00000555232 STAC3Q96MF2 364 aa15.51■□□□□ 0.07
ARHGEF40-206ENST00000555232 CCDC9Q9Y3X0 531 aaKnown RBP15.51■□□□□ 0.07
ARHGEF40-206ENST00000555232 ITSN2Q9NZM3 1697 aa15.51■□□□□ 0.07
ARHGEF40-206ENST00000555232 UGGT1Q9NYU2 1555 aa15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 CHD1O14646 1710 aa15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 TTC37Q6PGP7 1564 aa15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF40-206ENST00000555232 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 RTEL1-TNFRSF6BF6WH68 1400 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 AMOTL2Q9Y2J4 779 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 ABCA8O94911 1581 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 YEATS2Q9ULM3 1422 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 FOXO3O43524 673 aa15.49■□□□□ 0.07
ARHGEF40-206ENST00000555232 ZKSCAN2Q63HK3 967 aa15.48■□□□□ 0.07
ARHGEF40-206ENST00000555232 IPO9Q96P70 1041 aaKnown RBP15.48■□□□□ 0.07
ARHGEF40-206ENST00000555232 LNPKQ9C0E8 428 aa15.48■□□□□ 0.07
ARHGEF40-206ENST00000555232 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
ARHGEF40-206ENST00000555232 DUOX2Q9NRD8 1548 aa15.47■□□□□ 0.07
ARHGEF40-206ENST00000555232 IPO8O15397 1037 aaKnown RBP15.47■□□□□ 0.07
ARHGEF40-206ENST00000555232 ANKRD45Q5TZF3 282 aa15.47■□□□□ 0.07
ARHGEF40-206ENST00000555232 MCM10Q7L590 875 aa15.47■□□□□ 0.07
ARHGEF40-206ENST00000555232 ZC3H6P61129 1189 aaKnown RBP15.47■□□□□ 0.07
ARHGEF40-206ENST00000555232 LRRIQ1Q96JM4 1722 aa15.46■□□□□ 0.07
ARHGEF40-206ENST00000555232 BRPF3Q9ULD4 1205 aa15.46■□□□□ 0.07
ARHGEF40-206ENST00000555232 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.07
ARHGEF40-206ENST00000555232 RWDD1Q9H446 243 aaPredicted RBP15.46■□□□□ 0.07
ARHGEF40-206ENST00000555232 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.06
ARHGEF40-206ENST00000555232 RALGAPBQ86X10 1494 aa15.45■□□□□ 0.06
ARHGEF40-206ENST00000555232 FYB1O15117 783 aa15.45■□□□□ 0.06
ARHGEF40-206ENST00000555232 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
ARHGEF40-206ENST00000555232 SAMD9LQ8IVG5 1584 aa15.45■□□□□ 0.06
ARHGEF40-206ENST00000555232 THEMISQ8N1K5 641 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF40-206ENST00000555232 NOL8Q76FK4 1167 aaKnown RBP15.44■□□□□ 0.06
ARHGEF40-206ENST00000555232 ZNF518AQ6AHZ1 1483 aa15.44■□□□□ 0.06
ARHGEF40-206ENST00000555232 STK31Q9BXU1 1019 aa15.44■□□□□ 0.06
ARHGEF40-206ENST00000555232 SLFN5Q08AF3 891 aa15.43■□□□□ 0.06
ARHGEF40-206ENST00000555232 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
ARHGEF40-206ENST00000555232 NOB1Q9ULX3 412 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-206ENST00000555232 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
ARHGEF40-206ENST00000555232 NLRP2Q9NX02 1062 aa15.43■□□□□ 0.06
ARHGEF40-206ENST00000555232 RPGRIP1LQ68CZ1 1315 aa15.42■□□□□ 0.06
ARHGEF40-206ENST00000555232 ADGRL2O95490 1459 aa15.42■□□□□ 0.06
ARHGEF40-206ENST00000555232 TSPYL4Q9UJ04 414 aa15.42■□□□□ 0.06
ARHGEF40-206ENST00000555232 PLA2R1Q13018 1463 aa15.42■□□□□ 0.06
ARHGEF40-206ENST00000555232 WASLO00401 505 aaPredicted RBP15.41■□□□□ 0.06
ARHGEF40-206ENST00000555232 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
ARHGEF40-206ENST00000555232 AIMP1Q12904 312 aaKnown RBP15.41■□□□□ 0.06
ARHGEF40-206ENST00000555232 AEBP1Q8IUX7 1158 aa15.41■□□□□ 0.06
ARHGEF40-206ENST00000555232 PKNOX2Q96KN3 472 aa15.41■□□□□ 0.06
ARHGEF40-206ENST00000555232 SPATA31E1Q6ZUB1 1445 aa15.4■□□□□ 0.06
ARHGEF40-206ENST00000555232 HSPA2P54652 639 aa15.4■□□□□ 0.06
ARHGEF40-206ENST00000555232 TEFQ10587 303 aa15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 SMG6Q86US8 1419 aaKnown RBP15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 CENPQQ7L2Z9 268 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 CHMP3Q9Y3E7 222 aa15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 PLEKHH1Q9ULM0 1364 aa15.39■□□□□ 0.05
ARHGEF40-206ENST00000555232 MS4A1P11836 297 aa15.38■□□□□ 0.05
ARHGEF40-206ENST00000555232 GZF1Q9H116 711 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF40-206ENST00000555232 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
ARHGEF40-206ENST00000555232 KRT24Q2M2I5 525 aa15.38■□□□□ 0.05
ARHGEF40-206ENST00000555232 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
ARHGEF40-206ENST00000555232 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 SSH1Q8WYL5 1049 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 NPATQ14207 1427 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 ATP7AQ04656 1500 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 BECN1Q14457 450 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 TWISTNBQ3B726 338 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 ANKLE2Q86XL3 938 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 DDRGK1Q96HY6 314 aa15.37■□□□□ 0.05
ARHGEF40-206ENST00000555232 CALD1Q05682 793 aaKnown RBP15.36■□□□□ 0.05
ARHGEF40-206ENST00000555232 ACEP12821 1306 aa15.36■□□□□ 0.05
ARHGEF40-206ENST00000555232 UHRF1BP1Q6BDS2 1440 aa15.36■□□□□ 0.05
ARHGEF40-206ENST00000555232 TRIM6-TRIM34B2RNG4 842 aa15.36■□□□□ 0.05
ARHGEF40-206ENST00000555232 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
ARHGEF40-206ENST00000555232 ATF3P18847 181 aa15.35■□□□□ 0.05
ARHGEF40-206ENST00000555232 FOXD4L5Q5VV16 416 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-206ENST00000555232 FOXD4L4Q8WXT5 416 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-206ENST00000555232 STRN4Q9NRL3 753 aa15.35■□□□□ 0.05
ARHGEF40-206ENST00000555232 PARD3Q8TEW0 1356 aa15.35■□□□□ 0.05
ARHGEF40-206ENST00000555232 ZMYM3Q14202 1370 aa15.33■□□□□ 0.05
ARHGEF40-206ENST00000555232 SLC4A2P04920 1241 aa15.33■□□□□ 0.05
ARHGEF40-206ENST00000555232 LTKP29376 864 aa15.33■□□□□ 0.05
ARHGEF40-206ENST00000555232 HSP90AB1P08238 724 aaKnown RBP15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 LMOD3Q0VAK6 560 aa15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 FOXD4L6Q3SYB3 417 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 FOXD4L3Q6VB84 417 aaPredicted RBP15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 KCNA6P17658 529 aa15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 RARSP54136 660 aaKnown RBP15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 PDZRN3Q9UPQ7 1066 aa15.33■□□□□ 0.04
ARHGEF40-206ENST00000555232 ATAD2Q6PL18 1390 aa15.32■□□□□ 0.04
ARHGEF40-206ENST00000555232 TMEM57Q8N5G2 664 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms