RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 MYOM2P54296 1465 aa12.36□□□□□ -0.43
TRIM9-204ENST00000555170 MST1RQ04912 1400 aa12.36□□□□□ -0.43
TRIM9-204ENST00000555170 RPGRIP1LQ68CZ1 1315 aa12.36□□□□□ -0.43
TRIM9-204ENST00000555170 METP08581 1390 aa12.35□□□□□ -0.43
TRIM9-204ENST00000555170 RGL3Q3MIN7 710 aa12.35□□□□□ -0.43
TRIM9-204ENST00000555170 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
TRIM9-204ENST00000555170 ATRNO75882 1429 aa12.35□□□□□ -0.43
TRIM9-204ENST00000555170 ADGRF5Q8IZF2 1346 aa12.35□□□□□ -0.43
TRIM9-204ENST00000555170 NRXN1Q9ULB1 1477 aa12.34□□□□□ -0.43
TRIM9-204ENST00000555170 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
TRIM9-204ENST00000555170 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
TRIM9-204ENST00000555170 PIK3C2GO75747 1445 aa12.34□□□□□ -0.43
TRIM9-204ENST00000555170 LAMC1P11047 1609 aa12.33□□□□□ -0.43
TRIM9-204ENST00000555170 PSDA5PKW4 1024 aaPredicted RBP12.33□□□□□ -0.44
TRIM9-204ENST00000555170 DCCP43146 1447 aa12.33□□□□□ -0.44
TRIM9-204ENST00000555170 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
TRIM9-204ENST00000555170 NALCNQ8IZF0 1738 aa12.32□□□□□ -0.44
TRIM9-204ENST00000555170 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
TRIM9-204ENST00000555170 LRP5O75197 1615 aa12.32□□□□□ -0.44
TRIM9-204ENST00000555170 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
TRIM9-204ENST00000555170 GJD4Q96KN9 370 aaPredicted RBP12.31□□□□□ -0.44
TRIM9-204ENST00000555170 BCL9LQ86UU0 1499 aa12.3□□□□□ -0.44
TRIM9-204ENST00000555170 PRAG1Q86YV5 1406 aa12.29□□□□□ -0.44
TRIM9-204ENST00000555170 PTCH1Q13635 1447 aa12.28□□□□□ -0.44
TRIM9-204ENST00000555170 SF3B2Q13435 895 aaKnown RBP12.28□□□□□ -0.44
TRIM9-204ENST00000555170 ORAI2Q96SN7 254 aa12.28□□□□□ -0.44
TRIM9-204ENST00000555170 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
TRIM9-204ENST00000555170 ADGRB1O14514 1584 aa12.26□□□□□ -0.45
TRIM9-204ENST00000555170 YY1P25490 414 aa12.26□□□□□ -0.45
TRIM9-204ENST00000555170 SIN3AQ96ST3 1273 aa12.25□□□□□ -0.45
TRIM9-204ENST00000555170 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
TRIM9-204ENST00000555170 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
TRIM9-204ENST00000555170 TECPR2O15040 1411 aa12.24□□□□□ -0.45
TRIM9-204ENST00000555170 C1orf167Q5SNV9 1468 aa12.24□□□□□ -0.45
TRIM9-204ENST00000555170 DCAF11Q8TEB1 546 aa12.24□□□□□ -0.45
TRIM9-204ENST00000555170 PCGF6Q9BYE7 350 aa12.24□□□□□ -0.45
TRIM9-204ENST00000555170 YTHDC2Q9H6S0 1430 aaKnown RBP12.23□□□□□ -0.45
TRIM9-204ENST00000555170 ADGRL3Q9HAR2 1447 aa12.23□□□□□ -0.45
TRIM9-204ENST00000555170 LRPPRCP42704 1394 aaKnown RBP12.23□□□□□ -0.45
TRIM9-204ENST00000555170 CFAP70Q5T0N1 1121 aa12.23□□□□□ -0.45
TRIM9-204ENST00000555170 ARHGEF28Q8N1W1 1705 aaKnown RBP12.23□□□□□ -0.45
TRIM9-204ENST00000555170 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
TRIM9-204ENST00000555170 SEPT12Q8IYM1 358 aa12.22□□□□□ -0.45
TRIM9-204ENST00000555170 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
TRIM9-204ENST00000555170 KDM2AQ9Y2K7 1162 aa12.22□□□□□ -0.45
TRIM9-204ENST00000555170 RALGAPBQ86X10 1494 aa12.21□□□□□ -0.45
TRIM9-204ENST00000555170 UNC5CLQ8IV45 518 aa12.21□□□□□ -0.45
TRIM9-204ENST00000555170 TRPM1Q7Z4N2 1603 aa12.21□□□□□ -0.46
TRIM9-204ENST00000555170 CDC42BPGQ6DT37 1551 aa12.21□□□□□ -0.46
TRIM9-204ENST00000555170 PLEKHH1Q9ULM0 1364 aa12.2□□□□□ -0.46
TRIM9-204ENST00000555170 R3HDM1Q15032 1099 aaKnown RBP12.2□□□□□ -0.46
TRIM9-204ENST00000555170 DLC1Q96QB1 1528 aa12.2□□□□□ -0.46
TRIM9-204ENST00000555170 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
TRIM9-204ENST00000555170 GLI3P10071 1580 aa12.19□□□□□ -0.46
TRIM9-204ENST00000555170 NEUROD1Q13562 356 aa12.19□□□□□ -0.46
TRIM9-204ENST00000555170 STK26Q9P289 416 aa12.19□□□□□ -0.46
TRIM9-204ENST00000555170 BRWD3Q6RI45 1802 aa12.18□□□□□ -0.46
TRIM9-204ENST00000555170 FMN2Q9NZ56 1722 aa12.18□□□□□ -0.46
TRIM9-204ENST00000555170 BAG6P46379 1132 aa12.18□□□□□ -0.46
TRIM9-204ENST00000555170 L3MBTL2Q969R5 705 aa12.18□□□□□ -0.46
TRIM9-204ENST00000555170 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
TRIM9-204ENST00000555170 XPCQ01831 940 aaPredicted RBP12.17□□□□□ -0.46
TRIM9-204ENST00000555170 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
TRIM9-204ENST00000555170 IFFO2Q5TF58 517 aa12.17□□□□□ -0.46
TRIM9-204ENST00000555170 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
TRIM9-204ENST00000555170 ONECUT3O60422 494 aaPredicted RBP12.16□□□□□ -0.46
TRIM9-204ENST00000555170 WAPLQ7Z5K2 1190 aa12.16□□□□□ -0.46
TRIM9-204ENST00000555170 STAC3Q96MF2 364 aa12.16□□□□□ -0.46
TRIM9-204ENST00000555170 ADGRB2O60241 1585 aa12.16□□□□□ -0.46
TRIM9-204ENST00000555170 RGPD8O14715 1765 aaPredicted RBP12.15□□□□□ -0.46
TRIM9-204ENST00000555170 SLIT2O94813 1529 aa12.15□□□□□ -0.46
TRIM9-204ENST00000555170 FOXO3O43524 673 aa12.14□□□□□ -0.47
TRIM9-204ENST00000555170 ESCO1Q5FWF5 840 aa12.14□□□□□ -0.47
TRIM9-204ENST00000555170 USP32Q8NFA0 1604 aa12.14□□□□□ -0.47
TRIM9-204ENST00000555170 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
TRIM9-204ENST00000555170 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
TRIM9-204ENST00000555170 VPS72Q15906 364 aa12.13□□□□□ -0.47
TRIM9-204ENST00000555170 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
TRIM9-204ENST00000555170 QRICH2Q9H0J4 1663 aa12.13□□□□□ -0.47
TRIM9-204ENST00000555170 NBPF1Q3BBV0 1214 aa12.12□□□□□ -0.47
TRIM9-204ENST00000555170 TRAK1Q9UPV9 953 aa12.12□□□□□ -0.47
TRIM9-204ENST00000555170 TONSLQ96HA7 1378 aa12.12□□□□□ -0.47
TRIM9-204ENST00000555170 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.11□□□□□ -0.47
TRIM9-204ENST00000555170 PXDNQ92626 1479 aa12.11□□□□□ -0.47
TRIM9-204ENST00000555170 FAM182BQ5T319 152 aa12.11□□□□□ -0.47
TRIM9-204ENST00000555170 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
TRIM9-204ENST00000555170 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRIM9-204ENST00000555170 EZH2Q15910 746 aaKnown RBP12.1□□□□□ -0.47
TRIM9-204ENST00000555170 NBPF8Q3BBV2 869 aa12.1□□□□□ -0.47
TRIM9-204ENST00000555170 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
TRIM9-204ENST00000555170 A0A0G2JS52 829 aa12.09□□□□□ -0.47
TRIM9-204ENST00000555170 MYT1Q01538 1121 aa12.09□□□□□ -0.47
TRIM9-204ENST00000555170 KIF1AQ12756 1690 aa12.09□□□□□ -0.47
TRIM9-204ENST00000555170 TOPAZ1Q8N9V7 1692 aa12.08□□□□□ -0.48
TRIM9-204ENST00000555170 PLEKHG5O94827 1062 aa12.08□□□□□ -0.48
TRIM9-204ENST00000555170 SENP3-EIF4A1A0A087X0R7 540 aa12.07□□□□□ -0.48
TRIM9-204ENST00000555170 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
TRIM9-204ENST00000555170 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
TRIM9-204ENST00000555170 CABLES1Q8TDN4 633 aa12.07□□□□□ -0.48
TRIM9-204ENST00000555170 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms