RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 PKD2L1Q9P0L9 805 aa9.71□□□□□ -0.86
KTN1-219ENST00000555164 ZBTB24O43167 697 aaPredicted RBP9.69□□□□□ -0.86
KTN1-219ENST00000555164 HOXA2O43364 376 aa9.69□□□□□ -0.86
KTN1-219ENST00000555164 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.69□□□□□ -0.86
KTN1-219ENST00000555164 MMP16P51512 607 aa9.68□□□□□ -0.86
KTN1-219ENST00000555164 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
KTN1-219ENST00000555164 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
KTN1-219ENST00000555164 KRI1Q8N9T8 703 aaKnown RBP9.67□□□□□ -0.86
KTN1-219ENST00000555164 DXOO77932 396 aaKnown RBP9.65□□□□□ -0.86
KTN1-219ENST00000555164 CYP4X1Q8N118 509 aa9.65□□□□□ -0.86
KTN1-219ENST00000555164 HLA-CQ95604 372 aa9.65□□□□□ -0.86
KTN1-219ENST00000555164 TRIM32Q13049 653 aa9.63□□□□□ -0.87
KTN1-219ENST00000555164 NUTM1Q86Y26 1132 aa9.63□□□□□ -0.87
KTN1-219ENST00000555164 TOR4AQ9NXH8 423 aa9.63□□□□□ -0.87
KTN1-219ENST00000555164 WNT7AO00755 349 aa9.61□□□□□ -0.87
KTN1-219ENST00000555164 ST8SIA5O15466 376 aa9.61□□□□□ -0.87
KTN1-219ENST00000555164 GUCA2AQ02747 115 aa9.61□□□□□ -0.87
KTN1-219ENST00000555164 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
KTN1-219ENST00000555164 SLC24A1O60721 1099 aa9.6□□□□□ -0.87
KTN1-219ENST00000555164 BARGINQ6ZT62 677 aa9.6□□□□□ -0.87
KTN1-219ENST00000555164 AAASQ9NRG9 546 aa9.6□□□□□ -0.87
KTN1-219ENST00000555164 AVPP01185 164 aa9.59□□□□□ -0.87
KTN1-219ENST00000555164 TTLL12Q14166 644 aaPredicted RBP9.59□□□□□ -0.87
KTN1-219ENST00000555164 TTC24A2A3L6 582 aaPredicted RBP9.58□□□□□ -0.88
KTN1-219ENST00000555164 JUNDP17535 347 aa9.58□□□□□ -0.88
KTN1-219ENST00000555164 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
KTN1-219ENST00000555164 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
KTN1-219ENST00000555164 ZMYND10O75800 440 aa9.57□□□□□ -0.88
KTN1-219ENST00000555164 AMHR2Q16671 573 aa9.57□□□□□ -0.88
KTN1-219ENST00000555164 CTC1Q2NKJ3 1217 aa9.57□□□□□ -0.88
KTN1-219ENST00000555164 CCDC24Q8N4L8 307 aa9.57□□□□□ -0.88
KTN1-219ENST00000555164 ZNF775Q96BV0 537 aaPredicted RBP9.57□□□□□ -0.88
KTN1-219ENST00000555164 FDX1P10109 184 aa9.56□□□□□ -0.88
KTN1-219ENST00000555164 SSTR3P32745 418 aaPredicted RBP9.56□□□□□ -0.88
KTN1-219ENST00000555164 POTECB2RU33 542 aa9.55□□□□□ -0.88
KTN1-219ENST00000555164 AXIN1O15169 862 aa9.55□□□□□ -0.88
KTN1-219ENST00000555164 SNIP1Q8TAD8 396 aaKnown RBP9.55□□□□□ -0.88
KTN1-219ENST00000555164 ZC3H15Q8WU90 426 aaKnown RBP9.55□□□□□ -0.88
KTN1-219ENST00000555164 MRGPRX2Q96LB1 330 aa9.55□□□□□ -0.88
KTN1-219ENST00000555164 WNT7BP56706 349 aa9.54□□□□□ -0.88
KTN1-219ENST00000555164 SYMPKQ92797 1274 aaKnown RBP9.54□□□□□ -0.88
KTN1-219ENST00000555164 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
KTN1-219ENST00000555164 SMCPP49901 116 aaPredicted RBP9.53□□□□□ -0.88
KTN1-219ENST00000555164 GIGYF2Q6Y7W6 1299 aaKnown RBP9.53□□□□□ -0.88
KTN1-219ENST00000555164 SPIRE2Q8WWL2 714 aa9.53□□□□□ -0.88
KTN1-219ENST00000555164 NUDT12Q9BQG2 462 aa9.53□□□□□ -0.88
KTN1-219ENST00000555164 PCDHGC3Q9UN70 934 aa9.52□□□□□ -0.89
KTN1-219ENST00000555164 SMPD1P17405 629 aa9.51□□□□□ -0.89
KTN1-219ENST00000555164 MS4A1P11836 297 aa9.5□□□□□ -0.89
KTN1-219ENST00000555164 RC3H1Q5TC82 1133 aaKnown RBP9.5□□□□□ -0.89
KTN1-219ENST00000555164 MOXD2PA6NHM9 499 aa9.49□□□□□ -0.89
KTN1-219ENST00000555164 CCNYL3P0C7X3 344 aa9.49□□□□□ -0.89
KTN1-219ENST00000555164 SKOR1P84550 965 aa9.49□□□□□ -0.89
KTN1-219ENST00000555164 DACH1Q9UI36 760 aa9.49□□□□□ -0.89
KTN1-219ENST00000555164 J3QL48 77 aa9.48□□□□□ -0.89
KTN1-219ENST00000555164 PTPRNQ16849 979 aa9.48□□□□□ -0.89
KTN1-219ENST00000555164 NDUFV2P19404 249 aa9.47□□□□□ -0.89
KTN1-219ENST00000555164 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
KTN1-219ENST00000555164 PARP9Q8IXQ6 854 aa9.47□□□□□ -0.89
KTN1-219ENST00000555164 BEGAINQ9BUH8 593 aa9.47□□□□□ -0.89
KTN1-219ENST00000555164 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
KTN1-219ENST00000555164 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.9
KTN1-219ENST00000555164 MTMR2Q13614 643 aa9.46□□□□□ -0.9
KTN1-219ENST00000555164 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
KTN1-219ENST00000555164 GJA5P36382 358 aa9.45□□□□□ -0.9
KTN1-219ENST00000555164 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
KTN1-219ENST00000555164 EHBP1Q8NDI1 1231 aa9.45□□□□□ -0.9
KTN1-219ENST00000555164 PRR7Q8TB68 274 aa9.45□□□□□ -0.9
KTN1-219ENST00000555164 TRIM66O15016 1216 aa9.44□□□□□ -0.9
KTN1-219ENST00000555164 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
KTN1-219ENST00000555164 HPS1Q92902 700 aa9.43□□□□□ -0.9
KTN1-219ENST00000555164 AK7Q96M32 723 aa9.43□□□□□ -0.9
KTN1-219ENST00000555164 TBC1D2Q9BYX2 928 aa9.43□□□□□ -0.9
KTN1-219ENST00000555164 ATP13A2Q9NQ11 1180 aa9.43□□□□□ -0.9
KTN1-219ENST00000555164 ALDH1A1P00352 501 aa9.42□□□□□ -0.9
KTN1-219ENST00000555164 RSBN1LQ6PCB5 846 aaPredicted RBP9.42□□□□□ -0.9
KTN1-219ENST00000555164 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
KTN1-219ENST00000555164 EVA1BQ9NVM1 165 aa9.41□□□□□ -0.9
KTN1-219ENST00000555164 SH3BP2P78314 561 aa9.4□□□□□ -0.9
KTN1-219ENST00000555164 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
KTN1-219ENST00000555164 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
KTN1-219ENST00000555164 SENP2Q9HC62 589 aa9.4□□□□□ -0.9
KTN1-219ENST00000555164 SIAH2O43255 324 aa9.39□□□□□ -0.91
KTN1-219ENST00000555164 SPTLC1O15269 473 aa9.38□□□□□ -0.91
KTN1-219ENST00000555164 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
KTN1-219ENST00000555164 TRIM47Q96LD4 638 aa9.38□□□□□ -0.91
KTN1-219ENST00000555164 ZBTB3Q9H5J0 574 aa9.38□□□□□ -0.91
KTN1-219ENST00000555164 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
KTN1-219ENST00000555164 KIFC2Q96AC6 838 aa9.37□□□□□ -0.91
KTN1-219ENST00000555164 PRPF38BQ5VTL8 546 aaKnown RBP9.36□□□□□ -0.91
KTN1-219ENST00000555164 ZNF511Q8NB15 262 aa9.36□□□□□ -0.91
KTN1-219ENST00000555164 LCE2AQ5TA79 106 aaPredicted RBP9.35□□□□□ -0.91
KTN1-219ENST00000555164 LYPD8Q6UX82 237 aa9.35□□□□□ -0.91
KTN1-219ENST00000555164 RIC3Q7Z5B4 369 aa9.35□□□□□ -0.91
KTN1-219ENST00000555164 BAP1Q92560 729 aa9.35□□□□□ -0.91
KTN1-219ENST00000555164 PCDHB15Q9Y5E8 787 aa9.35□□□□□ -0.91
KTN1-219ENST00000555164 CFAP99D6REC4 459 aa9.34□□□□□ -0.91
KTN1-219ENST00000555164 WFS1O76024 890 aa9.34□□□□□ -0.91
KTN1-219ENST00000555164 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
KTN1-219ENST00000555164 HRCP23327 699 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms