RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	SPTLC1	O15269	473 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956	S1PR4	O95977	384 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956	CSPP1	Q1MSJ5	1256 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956		Q3C1V9	767 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956	PRDM9	Q9NQV7	894 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956	POLR3E	Q9NVU0	708 aa		11.14	□□□□□ -0.63
PSMC6-208	ENST00000554956	PPP1R18	Q6NYC8	613 aa		11.13	□□□□□ -0.63
PSMC6-208	ENST00000554956	FAM160A2	Q8N612	972 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMC6-208	ENST00000554956	SALL2	Q9Y467	1007 aa	Predicted RBP	11.13	□□□□□ -0.63
PSMC6-208	ENST00000554956	ABCC9	O60706	1549 aa		11.13	□□□□□ -0.63
PSMC6-208	ENST00000554956	C6orf229	H3BNL8	230 aa		11.11	□□□□□ -0.63
PSMC6-208	ENST00000554956	SLC6A16	Q9GZN6	736 aa		11.11	□□□□□ -0.63
PSMC6-208	ENST00000554956	CLK2	P49760	499 aa	Known RBP	11.1	□□□□□ -0.63
PSMC6-208	ENST00000554956	SH3D19	Q5HYK7	790 aa		11.1	□□□□□ -0.63
PSMC6-208	ENST00000554956	CABLES1	Q8TDN4	633 aa		11.1	□□□□□ -0.63
PSMC6-208	ENST00000554956	USB1	Q9BQ65	265 aa	Known RBP	11.1	□□□□□ -0.63
PSMC6-208	ENST00000554956	RSPH6A	Q9H0K4	717 aa		11.1	□□□□□ -0.63
PSMC6-208	ENST00000554956	PPEF1	O14829	653 aa	Predicted RBP	11.09	□□□□□ -0.63
PSMC6-208	ENST00000554956	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.09	□□□□□ -0.63
PSMC6-208	ENST00000554956	GJA5	P36382	358 aa		11.08	□□□□□ -0.64
PSMC6-208	ENST00000554956	QPCT	Q16769	361 aa		11.08	□□□□□ -0.64
PSMC6-208	ENST00000554956	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC6-208	ENST00000554956	RNF223	E7ERA6	249 aa		11.07	□□□□□ -0.64
PSMC6-208	ENST00000554956	MSS51	Q4VC12	460 aa		11.07	□□□□□ -0.64
PSMC6-208	ENST00000554956	RETREG3	Q86VR2	466 aa		11.07	□□□□□ -0.64
PSMC6-208	ENST00000554956	HRC	P23327	699 aa		11.06	□□□□□ -0.64
PSMC6-208	ENST00000554956	MTMR2	Q13614	643 aa		11.06	□□□□□ -0.64
PSMC6-208	ENST00000554956	SKIV2L	Q15477	1246 aa	Known RBP	11.06	□□□□□ -0.64
PSMC6-208	ENST00000554956	GGCX	P38435	758 aa		11.05	□□□□□ -0.64
PSMC6-208	ENST00000554956	FBXO31	Q5XUX0	539 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMC6-208	ENST00000554956	ZBTB3	Q9H5J0	574 aa		11.04	□□□□□ -0.64
PSMC6-208	ENST00000554956	PRR7	Q8TB68	274 aa		11.03	□□□□□ -0.64
PSMC6-208	ENST00000554956	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.03	□□□□□ -0.64
PSMC6-208	ENST00000554956	CFAP99	D6REC4	459 aa		11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	LILRB3	O75022	631 aa		11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	DXO	O77932	396 aa	Known RBP	11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	TUSC1	Q2TAM9	212 aa		11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	RTL5	Q5HYW3	569 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	PRPF38B	Q5VTL8	546 aa	Known RBP	11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	FCF1	Q9Y324	198 aa	Known RBP	11.02	□□□□□ -0.65
PSMC6-208	ENST00000554956	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	NUTM2E	B1AL46	878 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	JUND	P17535	347 aa		11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	MMP16	P51512	607 aa		11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	PLA2G2C	Q5R387	149 aa		11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	NUTM2D	Q5VT03	806 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
PSMC6-208	ENST00000554956	ANKLE1	Q8NAG6	615 aa		11	□□□□□ -0.65
PSMC6-208	ENST00000554956	SPDYE5	A6NIY4	337 aa		10.99	□□□□□ -0.65
PSMC6-208	ENST00000554956	EMID1	Q96A84	441 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMC6-208	ENST00000554956	TSC1	Q92574	1164 aa		10.98	□□□□□ -0.65
PSMC6-208	ENST00000554956	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.98	□□□□□ -0.65
PSMC6-208	ENST00000554956	GOPC	Q9HD26	462 aa		10.98	□□□□□ -0.65
PSMC6-208	ENST00000554956	PRKD2	Q9BZL6	878 aa		10.96	□□□□□ -0.65
PSMC6-208	ENST00000554956	CCDC24	Q8N4L8	307 aa		10.95	□□□□□ -0.66
PSMC6-208	ENST00000554956	LIAT1	Q6ZQX7	453 aa		10.94	□□□□□ -0.66
PSMC6-208	ENST00000554956	PER1	O15534	1290 aa	Predicted RBP	10.93	□□□□□ -0.66
PSMC6-208	ENST00000554956	NUDT12	Q9BQG2	462 aa		10.93	□□□□□ -0.66
PSMC6-208	ENST00000554956	PPP2R2D	Q66LE6	453 aa		10.92	□□□□□ -0.66
PSMC6-208	ENST00000554956	DESI1	Q6ICB0	168 aa		10.92	□□□□□ -0.66
PSMC6-208	ENST00000554956	SLC19A1	P41440	591 aa		10.91	□□□□□ -0.66
PSMC6-208	ENST00000554956	PTPRN	Q16849	979 aa		10.91	□□□□□ -0.66
PSMC6-208	ENST00000554956	CCDC180	Q9P1Z9	1646 aa		10.91	□□□□□ -0.66
PSMC6-208	ENST00000554956	RGS20	O76081	388 aa		10.9	□□□□□ -0.66
PSMC6-208	ENST00000554956	CCNYL3	P0C7X3	344 aa		10.9	□□□□□ -0.66
PSMC6-208	ENST00000554956	LYPD8	Q6UX82	237 aa		10.9	□□□□□ -0.66
PSMC6-208	ENST00000554956	RFC5	P40937	340 aa		10.89	□□□□□ -0.67
PSMC6-208	ENST00000554956	CTDSPL2	Q05D32	466 aa		10.89	□□□□□ -0.67
PSMC6-208	ENST00000554956	PTCRA	Q6ISU1	281 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMC6-208	ENST00000554956	HELB	Q8NG08	1087 aa	Predicted RBP	10.89	□□□□□ -0.67
PSMC6-208	ENST00000554956	AP1G2	O75843	785 aa		10.88	□□□□□ -0.67
PSMC6-208	ENST00000554956		V9GY48	417 aa	Predicted RBP	10.88	□□□□□ -0.67
PSMC6-208	ENST00000554956	MAP10	Q9P2G4	905 aa		10.87	□□□□□ -0.67
PSMC6-208	ENST00000554956	SPRYD7	Q5W111	196 aa		10.85	□□□□□ -0.67
PSMC6-208	ENST00000554956	LRRN4	Q8WUT4	740 aa		10.85	□□□□□ -0.67
PSMC6-208	ENST00000554956	EVA1B	Q9NVM1	165 aa		10.85	□□□□□ -0.67
PSMC6-208	ENST00000554956	ZBTB24	O43167	697 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMC6-208	ENST00000554956	F12	P00748	615 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMC6-208	ENST00000554956	CTH	P32929	405 aa		10.84	□□□□□ -0.67
PSMC6-208	ENST00000554956	USP17L8	P0C7I0	530 aa		10.83	□□□□□ -0.68
PSMC6-208	ENST00000554956	RPIA	P49247	311 aa		10.83	□□□□□ -0.68
PSMC6-208	ENST00000554956	KCNH2	Q12809	1159 aa		10.83	□□□□□ -0.68
PSMC6-208	ENST00000554956	TRIM32	Q13049	653 aa		10.83	□□□□□ -0.68
PSMC6-208	ENST00000554956	ZNF697	Q5TEC3	545 aa		10.82	□□□□□ -0.68
PSMC6-208	ENST00000554956	UNC93B1	Q9H1C4	597 aa		10.82	□□□□□ -0.68
PSMC6-208	ENST00000554956	LINC01559	Q495D7	138 aa		10.8	□□□□□ -0.68
PSMC6-208	ENST00000554956	ZNF598	Q86UK7	904 aa	Known RBP	10.8	□□□□□ -0.68
PSMC6-208	ENST00000554956	HMX1	Q9NP08	348 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMC6-208	ENST00000554956	CD2BP2	O95400	341 aa	Known RBP	10.78	□□□□□ -0.68
PSMC6-208	ENST00000554956	SKOR1	P84550	965 aa		10.78	□□□□□ -0.68
PSMC6-208	ENST00000554956	TMEM132A	Q24JP5	1023 aa		10.78	□□□□□ -0.68
PSMC6-208	ENST00000554956	TMEM259	Q4ZIN3	620 aa		10.77	□□□□□ -0.69
PSMC6-208	ENST00000554956	TRIM67	Q6ZTA4	783 aa		10.77	□□□□□ -0.69
PSMC6-208	ENST00000554956	EPS8L1	Q8TE68	723 aa		10.77	□□□□□ -0.69
PSMC6-208	ENST00000554956	BAP1	Q92560	729 aa		10.77	□□□□□ -0.69
PSMC6-208	ENST00000554956	FOXC1	Q12948	553 aa		10.76	□□□□□ -0.69
PSMC6-208	ENST00000554956	NR6A1	Q15406	480 aa		10.76	□□□□□ -0.69
PSMC6-208	ENST00000554956	TNFRSF10A	O00220	468 aa		10.75	□□□□□ -0.69
PSMC6-208	ENST00000554956	PKD2L1	Q9P0L9	805 aa		10.75	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms