RNA–Protein interactions for RNA: ENST00000554821.1

CFAP54-207, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 3

Gene CFAP54, Length 474 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-207ENST00000554821 MDM2Q00987 491 aaPredicted RBP8.61□□□□□ -1.03
CFAP54-207ENST00000554821 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
CFAP54-207ENST00000554821 CTC1Q2NKJ3 1217 aa8.6□□□□□ -1.03
CFAP54-207ENST00000554821 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
CFAP54-207ENST00000554821 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
CFAP54-207ENST00000554821 BCANQ96GW7 911 aa8.6□□□□□ -1.03
CFAP54-207ENST00000554821 AXIN1O15169 862 aa8.59□□□□□ -1.03
CFAP54-207ENST00000554821 FUT2Q10981 343 aa8.59□□□□□ -1.03
CFAP54-207ENST00000554821 Q3C1V9 767 aa8.59□□□□□ -1.03
CFAP54-207ENST00000554821 MORN1Q5T089 497 aa8.59□□□□□ -1.03
CFAP54-207ENST00000554821 SCUBE3Q8IX30 993 aa8.59□□□□□ -1.03
CFAP54-207ENST00000554821 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
CFAP54-207ENST00000554821 AMHR2Q16671 573 aa8.58□□□□□ -1.04
CFAP54-207ENST00000554821 ZSCAN1Q8NBB4 408 aa8.58□□□□□ -1.04
CFAP54-207ENST00000554821 KDM4AO75164 1064 aa8.57□□□□□ -1.04
CFAP54-207ENST00000554821 FMNL1O95466 1100 aaPredicted RBP8.57□□□□□ -1.04
CFAP54-207ENST00000554821 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
CFAP54-207ENST00000554821 SLC6A16Q9GZN6 736 aa8.57□□□□□ -1.04
CFAP54-207ENST00000554821 FAM217BQ9NTX9 383 aaPredicted RBP8.57□□□□□ -1.04
CFAP54-207ENST00000554821 TLL1O43897 1013 aa8.56□□□□□ -1.04
CFAP54-207ENST00000554821 PUS10Q3MIT2 529 aaKnown RBP8.56□□□□□ -1.04
CFAP54-207ENST00000554821 SPSB2Q99619 263 aa8.56□□□□□ -1.04
CFAP54-207ENST00000554821 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
CFAP54-207ENST00000554821 AK7Q96M32 723 aa8.55□□□□□ -1.04
CFAP54-207ENST00000554821 S1PR4O95977 384 aa8.53□□□□□ -1.04
CFAP54-207ENST00000554821 MSS51Q4VC12 460 aa8.53□□□□□ -1.04
CFAP54-207ENST00000554821 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CFAP54-207ENST00000554821 SLC27A5Q9Y2P5 690 aa8.53□□□□□ -1.04
CFAP54-207ENST00000554821 DIXDC1Q155Q3 683 aa8.52□□□□□ -1.05
CFAP54-207ENST00000554821 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
CFAP54-207ENST00000554821 PKD2L1Q9P0L9 805 aa8.52□□□□□ -1.05
CFAP54-207ENST00000554821 HOXA2O43364 376 aa8.5□□□□□ -1.05
CFAP54-207ENST00000554821 BRICD5Q6PL45 260 aa8.5□□□□□ -1.05
CFAP54-207ENST00000554821 SSTR3P32745 418 aaPredicted RBP8.49□□□□□ -1.05
CFAP54-207ENST00000554821 TOR4AQ9NXH8 423 aa8.49□□□□□ -1.05
CFAP54-207ENST00000554821 PPEF1O14829 653 aaPredicted RBP8.48□□□□□ -1.05
CFAP54-207ENST00000554821 TRIM66O15016 1216 aa8.48□□□□□ -1.05
CFAP54-207ENST00000554821 SNRPBP14678 240 aaKnown RBP8.48□□□□□ -1.05
CFAP54-207ENST00000554821 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
CFAP54-207ENST00000554821 SLC16A10Q8TF71 515 aa8.48□□□□□ -1.05
CFAP54-207ENST00000554821 TRIM47Q96LD4 638 aa8.48□□□□□ -1.05
CFAP54-207ENST00000554821 KRTAP4-8Q9BYQ9 185 aa8.48□□□□□ -1.05
CFAP54-207ENST00000554821 USB1Q9BQ65 265 aaKnown RBP8.47□□□□□ -1.05
CFAP54-207ENST00000554821 SENP2Q9HC62 589 aa8.47□□□□□ -1.05
CFAP54-207ENST00000554821 GJA5P36382 358 aa8.46□□□□□ -1.06
CFAP54-207ENST00000554821 RPIAP49247 311 aa8.46□□□□□ -1.06
CFAP54-207ENST00000554821 GMPRP36959 345 aa8.45□□□□□ -1.06
CFAP54-207ENST00000554821 FOXC1Q12948 553 aa8.45□□□□□ -1.06
CFAP54-207ENST00000554821 PARP9Q8IXQ6 854 aa8.45□□□□□ -1.06
CFAP54-207ENST00000554821 ATP13A2Q9NQ11 1180 aa8.45□□□□□ -1.06
CFAP54-207ENST00000554821 RNF19BQ6ZMZ0 732 aa8.44□□□□□ -1.06
CFAP54-207ENST00000554821 KCTD17Q8N5Z5 321 aa8.44□□□□□ -1.06
CFAP54-207ENST00000554821 FAM160A2Q8N612 972 aaPredicted RBP8.44□□□□□ -1.06
CFAP54-207ENST00000554821 REPIN1Q9BWE0 567 aaKnown RBP8.44□□□□□ -1.06
CFAP54-207ENST00000554821 SPDYE5A6NIY4 337 aa8.43□□□□□ -1.06
CFAP54-207ENST00000554821 FDX1P10109 184 aa8.43□□□□□ -1.06
CFAP54-207ENST00000554821 MMP16P51512 607 aa8.43□□□□□ -1.06
CFAP54-207ENST00000554821 RETREG3Q86VR2 466 aa8.43□□□□□ -1.06
CFAP54-207ENST00000554821 BEGAINQ9BUH8 593 aa8.43□□□□□ -1.06
CFAP54-207ENST00000554821 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
CFAP54-207ENST00000554821 CD2BP2O95400 341 aaKnown RBP8.42□□□□□ -1.06
CFAP54-207ENST00000554821 PDE4DQ08499 809 aa8.42□□□□□ -1.06
CFAP54-207ENST00000554821 KCNMA1Q12791 1236 aa8.42□□□□□ -1.06
CFAP54-207ENST00000554821 SPIRE2Q8WWL2 714 aa8.42□□□□□ -1.06
CFAP54-207ENST00000554821 ZBTB24O43167 697 aaPredicted RBP8.41□□□□□ -1.06
CFAP54-207ENST00000554821 DXOO77932 396 aaKnown RBP8.41□□□□□ -1.06
CFAP54-207ENST00000554821 PLA2G2CQ5R387 149 aa8.41□□□□□ -1.06
CFAP54-207ENST00000554821 CYP4X1Q8N118 509 aa8.41□□□□□ -1.06
CFAP54-207ENST00000554821 KIFC2Q96AC6 838 aa8.41□□□□□ -1.06
CFAP54-207ENST00000554821 XP32Q5T750 250 aa8.4□□□□□ -1.06
CFAP54-207ENST00000554821 IRF7Q92985 503 aa8.4□□□□□ -1.06
CFAP54-207ENST00000554821 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
CFAP54-207ENST00000554821 JUNDP17535 347 aa8.39□□□□□ -1.07
CFAP54-207ENST00000554821 NPAS3Q8IXF0 933 aa8.39□□□□□ -1.07
CFAP54-207ENST00000554821 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
CFAP54-207ENST00000554821 PRDM9Q9NQV7 894 aa8.38□□□□□ -1.07
CFAP54-207ENST00000554821 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CFAP54-207ENST00000554821 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
CFAP54-207ENST00000554821 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.36□□□□□ -1.07
CFAP54-207ENST00000554821 MS4A1P11836 297 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 GSK3AP49840 483 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 GUCA2AQ02747 115 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 MTMR2Q13614 643 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 DESI1Q6ICB0 168 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 HLA-CQ95604 372 aa8.36□□□□□ -1.07
CFAP54-207ENST00000554821 MOXD2PA6NHM9 499 aa8.35□□□□□ -1.07
CFAP54-207ENST00000554821 SPTLC1O15269 473 aa8.35□□□□□ -1.07
CFAP54-207ENST00000554821 TUSC1Q2TAM9 212 aa8.35□□□□□ -1.07
CFAP54-207ENST00000554821 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
CFAP54-207ENST00000554821 RSBN1LQ6PCB5 846 aaPredicted RBP8.35□□□□□ -1.07
CFAP54-207ENST00000554821 RSPH6AQ9H0K4 717 aa8.35□□□□□ -1.07
CFAP54-207ENST00000554821 PCDHGC3Q9UN70 934 aa8.34□□□□□ -1.07
CFAP54-207ENST00000554821 TRIM32Q13049 653 aa8.33□□□□□ -1.08
CFAP54-207ENST00000554821 PTPRNQ16849 979 aa8.33□□□□□ -1.08
CFAP54-207ENST00000554821 KRTAP9-2Q9BYQ4 174 aa8.33□□□□□ -1.08
CFAP54-207ENST00000554821 ZBTB3Q9H5J0 574 aa8.33□□□□□ -1.08
CFAP54-207ENST00000554821 NDUFV2P19404 249 aa8.32□□□□□ -1.08
CFAP54-207ENST00000554821 NUDT12Q9BQG2 462 aa8.32□□□□□ -1.08
CFAP54-207ENST00000554821 CCNYL3P0C7X3 344 aa8.31□□□□□ -1.08
CFAP54-207ENST00000554821 WNT7BP56706 349 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms