RNA–Protein interactions for RNA: ENST00000554750.1

RPGRIP1-206, Transcript of RPGR interacting protein 1, humanhuman

TSL 5

Gene RPGRIP1, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-206ENST00000554750 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
RPGRIP1-206ENST00000554750 CCER1Q8TC90 406 aaPredicted RBP9.53□□□□□ -0.88
RPGRIP1-206ENST00000554750 PUS7Q96PZ0 661 aaKnown RBP9.53□□□□□ -0.88
RPGRIP1-206ENST00000554750 KDM4AO75164 1064 aa9.52□□□□□ -0.89
RPGRIP1-206ENST00000554750 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
RPGRIP1-206ENST00000554750 ELOAQ14241 798 aaKnown RBP9.52□□□□□ -0.89
RPGRIP1-206ENST00000554750 HELBQ8NG08 1087 aaPredicted RBP9.52□□□□□ -0.89
RPGRIP1-206ENST00000554750 UNC13AQ9UPW8 1703 aa9.52□□□□□ -0.89
RPGRIP1-206ENST00000554750 C3orf67Q6ZVT6 689 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 TXNDC2Q86VQ3 553 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 ADAM33Q9BZ11 813 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 TMEM134Q9H6X4 195 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 FAM198AQ9UFP1 575 aa9.51□□□□□ -0.89
RPGRIP1-206ENST00000554750 POTEB2H3BUK9 544 aa9.5□□□□□ -0.89
RPGRIP1-206ENST00000554750 HOXA2O43364 376 aa9.5□□□□□ -0.89
RPGRIP1-206ENST00000554750 FDX1P10109 184 aa9.5□□□□□ -0.89
RPGRIP1-206ENST00000554750 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
RPGRIP1-206ENST00000554750 ATP9BO43861 1147 aa9.49□□□□□ -0.89
RPGRIP1-206ENST00000554750 TBC1D9Q6ZT07 1266 aa9.49□□□□□ -0.89
RPGRIP1-206ENST00000554750 SEC24BO95487 1268 aa9.48□□□□□ -0.89
RPGRIP1-206ENST00000554750 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
RPGRIP1-206ENST00000554750 LRRN4Q8WUT4 740 aa9.48□□□□□ -0.89
RPGRIP1-206ENST00000554750 RDH13Q8NBN7 331 aa9.47□□□□□ -0.89
RPGRIP1-206ENST00000554750 KIAA1522Q9P206 1035 aaPredicted RBP9.47□□□□□ -0.89
RPGRIP1-206ENST00000554750 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.89
RPGRIP1-206ENST00000554750 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
RPGRIP1-206ENST00000554750 MTMR2Q13614 643 aa9.46□□□□□ -0.9
RPGRIP1-206ENST00000554750 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.9
RPGRIP1-206ENST00000554750 COLQQ9Y215 455 aaPredicted RBP9.46□□□□□ -0.9
RPGRIP1-206ENST00000554750 CDK11BP21127 795 aaKnown RBP9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 KANK4Q5T7N3 995 aaPredicted RBP9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 TMEM164Q5U3C3 297 aa9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 MAMSTRQ6ZN01 415 aa9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 PNMA1Q8ND90 353 aa9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 MRRFQ96E11 262 aaKnown RBP9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 ZMIZ1Q9ULJ6 1067 aa9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 CDK11AQ9UQ88 783 aaPredicted RBP9.45□□□□□ -0.9
RPGRIP1-206ENST00000554750 GCGRP47871 477 aa9.44□□□□□ -0.9
RPGRIP1-206ENST00000554750 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
RPGRIP1-206ENST00000554750 ARID4AP29374 1257 aaPredicted RBP9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 PHLDB3Q6NSJ2 640 aa9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 EPS8L1Q8TE68 723 aa9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 SIRT1Q96EB6 747 aa9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 FAM163AQ96GL9 167 aaPredicted RBP9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
RPGRIP1-206ENST00000554750 CFAP99D6REC4 459 aa9.42□□□□□ -0.9
RPGRIP1-206ENST00000554750 SLF2Q8IX21 1173 aa9.42□□□□□ -0.9
RPGRIP1-206ENST00000554750 TSC1Q92574 1164 aa9.42□□□□□ -0.9
RPGRIP1-206ENST00000554750 NFATC2IPQ8NCF5 419 aa9.41□□□□□ -0.9
RPGRIP1-206ENST00000554750 TATDN2Q93075 761 aa9.41□□□□□ -0.9
RPGRIP1-206ENST00000554750 PNMA3Q9UL41 463 aa9.41□□□□□ -0.9
RPGRIP1-206ENST00000554750 NOVA2Q9UNW9 492 aaKnown RBP9.41□□□□□ -0.9
RPGRIP1-206ENST00000554750 C3orf80F5H4A9 247 aa9.4□□□□□ -0.9
RPGRIP1-206ENST00000554750 ZNF16P17020 682 aaPredicted RBP9.4□□□□□ -0.9
RPGRIP1-206ENST00000554750 COL9A1P20849 921 aa9.4□□□□□ -0.9
RPGRIP1-206ENST00000554750 SSFA2P28290 1259 aa9.4□□□□□ -0.9
RPGRIP1-206ENST00000554750 GUCA2AQ02747 115 aa9.4□□□□□ -0.9
RPGRIP1-206ENST00000554750 SOWAHDA6NJG2 315 aa9.39□□□□□ -0.91
RPGRIP1-206ENST00000554750 PPP1R3GB7ZBB8 358 aa9.38□□□□□ -0.91
RPGRIP1-206ENST00000554750 BCL2L13Q9BXK5 485 aa9.38□□□□□ -0.91
RPGRIP1-206ENST00000554750 FAM196BA6NMK8 535 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 TCF3P15923 654 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 NR1H3Q13133 447 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 NR6A1Q15406 480 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 NOM1Q5C9Z4 860 aaKnown RBP9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 HLA-CQ95604 372 aa9.37□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
RPGRIP1-206ENST00000554750 TRIM6-TRIM34B2RNG4 842 aa9.36□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
RPGRIP1-206ENST00000554750 C6orf229H3BNL8 230 aa9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 MARSP56192 900 aaKnown RBP9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 LCE2DQ5TA82 110 aaPredicted RBP9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 FAM177A1Q8N128 213 aaPredicted RBP9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 CLP1Q92989 425 aaKnown RBP9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 BCL2L12Q9HB09 334 aa9.35□□□□□ -0.91
RPGRIP1-206ENST00000554750 POTEFA5A3E0 1075 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L15C9J2P7 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L10C9JJH3 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L13C9JLJ4 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L12C9JPN9 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L11C9JVI0 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L21D6R901 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L18D6R9N7 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L22D6RA61 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L17D6RBQ6 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L19D6RCP7 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L20D6RJB6 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 PIK3CDO00329 1044 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 NUDT7P0C024 238 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 USP17L24Q0WX57 530 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 CDAN1Q8IWY9 1227 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 GIPC2Q8TF65 315 aa9.34□□□□□ -0.91
RPGRIP1-206ENST00000554750 SLC39A7Q92504 469 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms