RNA–Protein interactions for RNA: ENST00000554534.5

PCNX4-208, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 357 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-208ENST00000554534 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
PCNX4-208ENST00000554534 VGFO15240 615 aaPredicted RBP10.14□□□□□ -0.79
PCNX4-208ENST00000554534 CABLES1Q8TDN4 633 aa10.14□□□□□ -0.79
PCNX4-208ENST00000554534 TRPC5Q9UL62 973 aaPredicted RBP10.14□□□□□ -0.79
PCNX4-208ENST00000554534 NAIPQ13075 1403 aa10.14□□□□□ -0.79
PCNX4-208ENST00000554534 PLEKHH1Q9ULM0 1364 aa10.14□□□□□ -0.79
PCNX4-208ENST00000554534 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
PCNX4-208ENST00000554534 SAFB2Q14151 953 aaKnown RBP eCLIP10.12□□□□□ -0.79
PCNX4-208ENST00000554534 ATAD2Q6PL18 1390 aa10.12□□□□□ -0.79
PCNX4-208ENST00000554534 EP400Q96L91 3159 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 ATRNO75882 1429 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 LMOD2Q6P5Q4 547 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 DEFB132Q7Z7B7 95 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 ZRANB1Q9UGI0 708 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 PPLO60437 1756 aa10.11□□□□□ -0.79
PCNX4-208ENST00000554534 BCL9LQ86UU0 1499 aa10.1□□□□□ -0.79
PCNX4-208ENST00000554534 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
PCNX4-208ENST00000554534 RGPD8O14715 1765 aaPredicted RBP10.1□□□□□ -0.79
PCNX4-208ENST00000554534 KRT28Q7Z3Y7 464 aa10.09□□□□□ -0.79
PCNX4-208ENST00000554534 CCDC9Q9Y3X0 531 aaKnown RBP10.09□□□□□ -0.79
PCNX4-208ENST00000554534 BRWD3Q6RI45 1802 aa10.09□□□□□ -0.79
PCNX4-208ENST00000554534 PTCH1Q13635 1447 aa10.08□□□□□ -0.8
PCNX4-208ENST00000554534 PXDNQ92626 1479 aa10.08□□□□□ -0.8
PCNX4-208ENST00000554534 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 LAMC1P11047 1609 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
PCNX4-208ENST00000554534 MYOM2P54296 1465 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 HAP1P54257 671 aaPredicted RBP10.07□□□□□ -0.8
PCNX4-208ENST00000554534 FAM182BQ5T319 152 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 PMFBP1Q8TBY8 1022 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 HFM1A2PYH4 1435 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 RPGRIP1LQ68CZ1 1315 aa10.07□□□□□ -0.8
PCNX4-208ENST00000554534 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
PCNX4-208ENST00000554534 UNC5CLQ8IV45 518 aa10.06□□□□□ -0.8
PCNX4-208ENST00000554534 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
PCNX4-208ENST00000554534 COL22A1Q8NFW1 1626 aaPredicted RBP10.06□□□□□ -0.8
PCNX4-208ENST00000554534 GLI3P10071 1580 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 A0A0G2JS52 829 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 MYT1Q01538 1121 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 CFAP70Q5T0N1 1121 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 RRBP1Q9P2E9 1410 aaKnown RBP10.05□□□□□ -0.8
PCNX4-208ENST00000554534 SPATA31A3Q5VYP0 1347 aa10.05□□□□□ -0.8
PCNX4-208ENST00000554534 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
PCNX4-208ENST00000554534 HIRIP3Q9BW71 556 aaPredicted RBP10.04□□□□□ -0.8
PCNX4-208ENST00000554534 FAM83GA6ND36 823 aa10.03□□□□□ -0.8
PCNX4-208ENST00000554534 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
PCNX4-208ENST00000554534 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
PCNX4-208ENST00000554534 FMN2Q9NZ56 1722 aa10.02□□□□□ -0.8
PCNX4-208ENST00000554534 CDC42BPGQ6DT37 1551 aa10.02□□□□□ -0.81
PCNX4-208ENST00000554534 PSME1Q06323 249 aa10.02□□□□□ -0.81
PCNX4-208ENST00000554534 PRAM1Q96QH2 718 aa10.02□□□□□ -0.81
PCNX4-208ENST00000554534 YTHDC2Q9H6S0 1430 aaKnown RBP10.01□□□□□ -0.81
PCNX4-208ENST00000554534 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
PCNX4-208ENST00000554534 KDM2AQ9Y2K7 1162 aa10.01□□□□□ -0.81
PCNX4-208ENST00000554534 SLIT2O94813 1529 aa10.01□□□□□ -0.81
PCNX4-208ENST00000554534 CCDC144AA2RUR9 1427 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 IFT172Q9UG01 1749 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 KRT27Q7Z3Y8 459 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 CCDC125Q86Z20 511 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 TRAK1Q9UPV9 953 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 ABCC11Q96J66 1382 aa10□□□□□ -0.81
PCNX4-208ENST00000554534 EN1Q05925 392 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-208ENST00000554534 SF3B2Q13435 895 aaKnown RBP9.99□□□□□ -0.81
PCNX4-208ENST00000554534 VPS72Q15906 364 aa9.99□□□□□ -0.81
PCNX4-208ENST00000554534 C14orf93Q9H972 538 aaKnown RBP9.99□□□□□ -0.81
PCNX4-208ENST00000554534 BTG4Q9NY30 223 aa9.99□□□□□ -0.81
PCNX4-208ENST00000554534 POGKQ9P215 609 aa9.99□□□□□ -0.81
PCNX4-208ENST00000554534 MINK1Q8N4C8 1332 aaPredicted RBP9.99□□□□□ -0.81
PCNX4-208ENST00000554534 USP32Q8NFA0 1604 aa9.99□□□□□ -0.81
PCNX4-208ENST00000554534 PLCH1Q4KWH8 1693 aa9.99□□□□□ -0.81
PCNX4-208ENST00000554534 NUTM2GQ5VZR2 741 aa9.98□□□□□ -0.81
PCNX4-208ENST00000554534 BLMP54132 1417 aaPredicted RBP9.98□□□□□ -0.81
PCNX4-208ENST00000554534 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.97□□□□□ -0.81
PCNX4-208ENST00000554534 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
PCNX4-208ENST00000554534 TECPR2O15040 1411 aa9.97□□□□□ -0.81
PCNX4-208ENST00000554534 PIK3C2GO75747 1445 aa9.97□□□□□ -0.81
PCNX4-208ENST00000554534 TNS3Q68CZ2 1445 aa9.97□□□□□ -0.81
PCNX4-208ENST00000554534 PRAG1Q86YV5 1406 aa9.97□□□□□ -0.81
PCNX4-208ENST00000554534 R3HDM1Q15032 1099 aaKnown RBP9.96□□□□□ -0.82
PCNX4-208ENST00000554534 CHRNA2Q15822 529 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 PRR36Q9H6K5 1346 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 ANKRD30BQ9BXX2 1392 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 KIF1AQ12756 1690 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 ABCA3Q99758 1704 aa9.96□□□□□ -0.82
PCNX4-208ENST00000554534 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
PCNX4-208ENST00000554534 DHX57Q6P158 1386 aaKnown RBP9.95□□□□□ -0.82
PCNX4-208ENST00000554534 HRCP23327 699 aa9.94□□□□□ -0.82
PCNX4-208ENST00000554534 EZH2Q15910 746 aaKnown RBP9.94□□□□□ -0.82
PCNX4-208ENST00000554534 STRN4Q9NRL3 753 aa9.94□□□□□ -0.82
PCNX4-208ENST00000554534 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
PCNX4-208ENST00000554534 NRXN1Q9ULB1 1477 aa9.93□□□□□ -0.82
PCNX4-208ENST00000554534 ZC3H6P61129 1189 aaKnown RBP9.93□□□□□ -0.82
PCNX4-208ENST00000554534 NGDNQ8NEJ9 315 aaKnown RBP9.93□□□□□ -0.82
PCNX4-208ENST00000554534 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
PCNX4-208ENST00000554534 TRIM37O94972 964 aa9.92□□□□□ -0.82
PCNX4-208ENST00000554534 BAG6P46379 1132 aa9.92□□□□□ -0.82
PCNX4-208ENST00000554534 DCAF11Q8TEB1 546 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms