RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 USP46P62068 366 aa10.27□□□□□ -0.77
CHD8-207ENST00000554384 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
CHD8-207ENST00000554384 NUTM2BA6NNL0 878 aaPredicted RBP10.26□□□□□ -0.77
CHD8-207ENST00000554384 NUTM2EB1AL46 878 aaPredicted RBP10.26□□□□□ -0.77
CHD8-207ENST00000554384 HRCP23327 699 aa10.26□□□□□ -0.77
CHD8-207ENST00000554384 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
CHD8-207ENST00000554384 NUTM2AQ8IVF1 878 aaPredicted RBP10.26□□□□□ -0.77
CHD8-207ENST00000554384 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
CHD8-207ENST00000554384 POM121Q96HA1 1249 aa10.26□□□□□ -0.77
CHD8-207ENST00000554384 TUSC1Q2TAM9 212 aa10.25□□□□□ -0.77
CHD8-207ENST00000554384 PUS10Q3MIT2 529 aaKnown RBP10.25□□□□□ -0.77
CHD8-207ENST00000554384 GJA5P36382 358 aa10.24□□□□□ -0.77
CHD8-207ENST00000554384 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
CHD8-207ENST00000554384 MTRQ99707 1265 aa10.24□□□□□ -0.77
CHD8-207ENST00000554384 AP1G2O75843 785 aa10.23□□□□□ -0.77
CHD8-207ENST00000554384 UBTFP17480 764 aaKnown RBP10.23□□□□□ -0.77
CHD8-207ENST00000554384 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
CHD8-207ENST00000554384 APLP1P51693 650 aa10.22□□□□□ -0.77
CHD8-207ENST00000554384 ARID3CA6NKF2 412 aa10.21□□□□□ -0.77
CHD8-207ENST00000554384 ATP6V1AP38606 617 aa10.21□□□□□ -0.77
CHD8-207ENST00000554384 TMEM259Q4ZIN3 620 aa10.21□□□□□ -0.77
CHD8-207ENST00000554384 ZBTB3Q9H5J0 574 aa10.21□□□□□ -0.77
CHD8-207ENST00000554384 Q6ZNB5 142 aa10.2□□□□□ -0.78
CHD8-207ENST00000554384 IL21Q9HBE4 155 aa10.2□□□□□ -0.78
CHD8-207ENST00000554384 C6orf229H3BNL8 230 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 KMT5BQ4FZB7 885 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
CHD8-207ENST00000554384 PPP1R18Q6NYC8 613 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 MTMR14Q8NCE2 650 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 C1orf115Q9H7X2 142 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 SLC27A5Q9Y2P5 690 aa10.19□□□□□ -0.78
CHD8-207ENST00000554384 SPDYE5A6NIY4 337 aa10.18□□□□□ -0.78
CHD8-207ENST00000554384 CFAP99D6REC4 459 aa10.18□□□□□ -0.78
CHD8-207ENST00000554384 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
CHD8-207ENST00000554384 CTDSPL2Q05D32 466 aa10.18□□□□□ -0.78
CHD8-207ENST00000554384 MORN1Q5T089 497 aa10.18□□□□□ -0.78
CHD8-207ENST00000554384 TSC1Q92574 1164 aa10.18□□□□□ -0.78
CHD8-207ENST00000554384 MTMR2Q13614 643 aa10.17□□□□□ -0.78
CHD8-207ENST00000554384 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
CHD8-207ENST00000554384 LCE2BO14633 110 aa10.16□□□□□ -0.78
CHD8-207ENST00000554384 USP17L8P0C7I0 530 aa10.16□□□□□ -0.78
CHD8-207ENST00000554384 GRIPAP1Q4V328 841 aa10.16□□□□□ -0.78
CHD8-207ENST00000554384 COG6Q9Y2V7 657 aa10.16□□□□□ -0.78
CHD8-207ENST00000554384 A6NJR5 290 aa10.15□□□□□ -0.78
CHD8-207ENST00000554384 PRKD2Q9BZL6 878 aa10.15□□□□□ -0.78
CHD8-207ENST00000554384 TRAK2O60296 914 aa10.14□□□□□ -0.79
CHD8-207ENST00000554384 BLOC1S3Q6QNY0 202 aa10.14□□□□□ -0.79
CHD8-207ENST00000554384 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
CHD8-207ENST00000554384 LRRN4Q8WUT4 740 aa10.14□□□□□ -0.79
CHD8-207ENST00000554384 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
CHD8-207ENST00000554384 HMX1Q9NP08 348 aaPredicted RBP10.14□□□□□ -0.79
CHD8-207ENST00000554384 GFRA3O60609 400 aa10.13□□□□□ -0.79
CHD8-207ENST00000554384 APBB1O00213 710 aa10.12□□□□□ -0.79
CHD8-207ENST00000554384 COPS2P61201 443 aa10.12□□□□□ -0.79
CHD8-207ENST00000554384 PRR7Q8TB68 274 aa10.12□□□□□ -0.79
CHD8-207ENST00000554384 ARID3AQ99856 593 aa10.12□□□□□ -0.79
CHD8-207ENST00000554384 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.12□□□□□ -0.79
CHD8-207ENST00000554384 ZNF777Q9ULD5 760 aaPredicted RBP10.12□□□□□ -0.79
CHD8-207ENST00000554384 PER1O15534 1290 aaPredicted RBP10.11□□□□□ -0.79
CHD8-207ENST00000554384 RAD21O60216 631 aa10.11□□□□□ -0.79
CHD8-207ENST00000554384 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
CHD8-207ENST00000554384 FNBP4Q8N3X1 1017 aaPredicted RBP10.11□□□□□ -0.79
CHD8-207ENST00000554384 TBC1D2BQ9UPU7 963 aa10.11□□□□□ -0.79
CHD8-207ENST00000554384 SCUBE3Q8IX30 993 aa10.1□□□□□ -0.79
CHD8-207ENST00000554384 EPS8L1Q8TE68 723 aa10.1□□□□□ -0.79
CHD8-207ENST00000554384 GJD4Q96KN9 370 aaPredicted RBP10.1□□□□□ -0.79
CHD8-207ENST00000554384 PCDHB3Q9Y5E6 796 aa10.1□□□□□ -0.79
CHD8-207ENST00000554384 LAPTM4AQ15012 233 aa10.09□□□□□ -0.79
CHD8-207ENST00000554384 ABL2P42684 1182 aa10.08□□□□□ -0.8
CHD8-207ENST00000554384 BRICD5Q6PL45 260 aa10.08□□□□□ -0.8
CHD8-207ENST00000554384 NECTIN2Q92692 538 aa10.08□□□□□ -0.8
CHD8-207ENST00000554384 TRIM34Q9BYJ4 488 aa10.08□□□□□ -0.8
CHD8-207ENST00000554384 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
CHD8-207ENST00000554384 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
CHD8-207ENST00000554384 PRR14Q9BWN1 585 aa10.07□□□□□ -0.8
CHD8-207ENST00000554384 Q3C1V9 767 aa10.06□□□□□ -0.8
CHD8-207ENST00000554384 TRAF7Q6Q0C0 670 aa10.06□□□□□ -0.8
CHD8-207ENST00000554384 HELBQ8NG08 1087 aaPredicted RBP10.06□□□□□ -0.8
CHD8-207ENST00000554384 THAP11Q96EK4 314 aa10.06□□□□□ -0.8
CHD8-207ENST00000554384 ZPR1O75312 459 aa10.05□□□□□ -0.8
CHD8-207ENST00000554384 USB1Q9BQ65 265 aaKnown RBP10.04□□□□□ -0.8
CHD8-207ENST00000554384 NRG2O14511 850 aaPredicted RBP10.03□□□□□ -0.8
CHD8-207ENST00000554384 GPR37L1O60883 481 aa10.03□□□□□ -0.8
CHD8-207ENST00000554384 NR1I2O75469 434 aa10.03□□□□□ -0.8
CHD8-207ENST00000554384 NR6A1Q15406 480 aa10.03□□□□□ -0.8
CHD8-207ENST00000554384 ZNF330Q9Y3S2 320 aaPredicted RBP10.03□□□□□ -0.8
CHD8-207ENST00000554384 POM121CA8CG34 1229 aa10.02□□□□□ -0.81
CHD8-207ENST00000554384 IRF5Q13568 498 aa10.02□□□□□ -0.81
CHD8-207ENST00000554384 TLL1O43897 1013 aa10.01□□□□□ -0.81
CHD8-207ENST00000554384 FMNL1O95466 1100 aaPredicted RBP10.01□□□□□ -0.81
CHD8-207ENST00000554384 FAM160A2Q8N612 972 aaPredicted RBP10.01□□□□□ -0.81
CHD8-207ENST00000554384 LYPD8Q6UX82 237 aa10□□□□□ -0.81
CHD8-207ENST00000554384 CCDC82Q8N4S0 544 aa10□□□□□ -0.81
CHD8-207ENST00000554384 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
CHD8-207ENST00000554384 PRDM9Q9NQV7 894 aa10□□□□□ -0.81
CHD8-207ENST00000554384 NDUFB9Q9Y6M9 179 aa10□□□□□ -0.81
CHD8-207ENST00000554384 SOCS7O14512 581 aa9.99□□□□□ -0.81
CHD8-207ENST00000554384 SALL2Q9Y467 1007 aaPredicted RBP9.99□□□□□ -0.81
CHD8-207ENST00000554384 RNF223E7ERA6 249 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 218.4 ms