RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ABCC11Q96J66 1382 aa27.74■■■□□ 2.03
CPSF2-203ENST00000554290 IFT172Q9UG01 1749 aa27.74■■■□□ 2.03
CPSF2-203ENST00000554290 PIK3C2GO75747 1445 aa27.74■■■□□ 2.03
CPSF2-203ENST00000554290 ESCO1Q5FWF5 840 aa27.73■■■□□ 2.03
CPSF2-203ENST00000554290 WAPLQ7Z5K2 1190 aa27.73■■■□□ 2.03
CPSF2-203ENST00000554290 LAMC1P11047 1609 aa27.73■■■□□ 2.03
CPSF2-203ENST00000554290 RAB3GAP2Q9H2M9 1393 aa27.73■■■□□ 2.03
CPSF2-203ENST00000554290 C8orf37Q96NL8 207 aa27.72■■■□□ 2.03
CPSF2-203ENST00000554290 CDC42BPGQ6DT37 1551 aa27.72■■■□□ 2.03
CPSF2-203ENST00000554290 NPHP3Q7Z494 1330 aa27.69■■■□□ 2.02
CPSF2-203ENST00000554290 C14orf93Q9H972 538 aaKnown RBP27.69■■■□□ 2.02
CPSF2-203ENST00000554290 YTHDC2Q9H6S0 1430 aaKnown RBP27.67■■■□□ 2.02
CPSF2-203ENST00000554290 ADAMTS2O95450 1211 aa27.67■■■□□ 2.02
CPSF2-203ENST00000554290 SIRT1Q96EB6 747 aa27.67■■■□□ 2.02
CPSF2-203ENST00000554290 NGLY1Q96IV0 654 aa27.67■■■□□ 2.02
CPSF2-203ENST00000554290 QTRT2Q9H974 415 aaKnown RBP27.65■■■□□ 2.02
CPSF2-203ENST00000554290 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.02
CPSF2-203ENST00000554290 PLEKHH1Q9ULM0 1364 aa27.64■■■□□ 2.02
CPSF2-203ENST00000554290 NUTM2FA1L443 756 aa27.64■■■□□ 2.02
CPSF2-203ENST00000554290 CDK12Q9NYV4 1490 aaPredicted RBP27.64■■■□□ 2.01
CPSF2-203ENST00000554290 FOXO3O43524 673 aa27.63■■■□□ 2.01
CPSF2-203ENST00000554290 CFAP70Q5T0N1 1121 aa27.63■■■□□ 2.01
CPSF2-203ENST00000554290 KNDC1Q76NI1 1749 aa27.63■■■□□ 2.01
CPSF2-203ENST00000554290 MYOM2P54296 1465 aa27.63■■■□□ 2.01
CPSF2-203ENST00000554290 NRXN1Q9ULB1 1477 aa27.62■■■□□ 2.01
CPSF2-203ENST00000554290 RBM6P78332 1123 aaKnown RBP27.61■■■□□ 2.01
CPSF2-203ENST00000554290 XPCQ01831 940 aaPredicted RBP27.58■■■□□ 2.01
CPSF2-203ENST00000554290 PXDNQ92626 1479 aa27.57■■■□□ 2
CPSF2-203ENST00000554290 HRCP23327 699 aa27.57■■■□□ 2
CPSF2-203ENST00000554290 UPF1Q92900 1129 aaKnown RBP eCLIP27.57■■■□□ 2
CPSF2-203ENST00000554290 USP21Q9UK80 565 aa27.56■■■□□ 2
CPSF2-203ENST00000554290 COL22A1Q8NFW1 1626 aaPredicted RBP27.54■■■□□ 2
CPSF2-203ENST00000554290 FNBP4Q8N3X1 1017 aaPredicted RBP27.53■■■□□ 2
CPSF2-203ENST00000554290 PRAM1Q96QH2 718 aa27.53■■■□□ 2
CPSF2-203ENST00000554290 POGKQ9P215 609 aa27.52■■■□□ 2
CPSF2-203ENST00000554290 FMN2Q9NZ56 1722 aa27.52■■■□□ 2
CPSF2-203ENST00000554290 STAC3Q96MF2 364 aa27.51■■□□□ 1.99
CPSF2-203ENST00000554290 TRPC5Q9UL62 973 aaPredicted RBP27.51■■□□□ 1.99
CPSF2-203ENST00000554290 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
CPSF2-203ENST00000554290 DCAF11Q8TEB1 546 aa27.5■■□□□ 1.99
CPSF2-203ENST00000554290 KDM2AQ9Y2K7 1162 aa27.5■■□□□ 1.99
CPSF2-203ENST00000554290 KRT28Q7Z3Y7 464 aa27.49■■□□□ 1.99
CPSF2-203ENST00000554290 RGS12O14924 1447 aa27.49■■□□□ 1.99
CPSF2-203ENST00000554290 SPATA31A3Q5VYP0 1347 aa27.48■■□□□ 1.99
CPSF2-203ENST00000554290 PHF8Q9UPP1 1060 aa27.48■■□□□ 1.99
CPSF2-203ENST00000554290 KIF1AQ12756 1690 aa27.48■■□□□ 1.99
CPSF2-203ENST00000554290 DLC1Q96QB1 1528 aa27.46■■□□□ 1.99
CPSF2-203ENST00000554290 PSME1Q06323 249 aa27.46■■□□□ 1.99
CPSF2-203ENST00000554290 TRAK1Q9UPV9 953 aa27.44■■□□□ 1.98
CPSF2-203ENST00000554290 ADGRB1O14514 1584 aa27.42■■□□□ 1.98
CPSF2-203ENST00000554290 ATRNO75882 1429 aa27.41■■□□□ 1.98
CPSF2-203ENST00000554290 BCL9LQ86UU0 1499 aa27.39■■□□□ 1.98
CPSF2-203ENST00000554290 HAP1P54257 671 aaPredicted RBP27.39■■□□□ 1.98
CPSF2-203ENST00000554290 ANKARQ7Z5J8 1434 aa27.39■■□□□ 1.97
CPSF2-203ENST00000554290 TNS3Q68CZ2 1445 aa27.38■■□□□ 1.97
CPSF2-203ENST00000554290 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
CPSF2-203ENST00000554290 HIRIP3Q9BW71 556 aaPredicted RBP27.36■■□□□ 1.97
CPSF2-203ENST00000554290 MARF1Q9Y4F3 1742 aaKnown RBP27.36■■□□□ 1.97
CPSF2-203ENST00000554290 EIF3AQ14152 1382 aaKnown RBP27.35■■□□□ 1.97
CPSF2-203ENST00000554290 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
CPSF2-203ENST00000554290 LMOD2Q6P5Q4 547 aa27.35■■□□□ 1.97
CPSF2-203ENST00000554290 PMFBP1Q8TBY8 1022 aa27.35■■□□□ 1.97
CPSF2-203ENST00000554290 MINK1Q8N4C8 1332 aaPredicted RBP27.35■■□□□ 1.97
CPSF2-203ENST00000554290 RGPD8O14715 1765 aaPredicted RBP27.35■■□□□ 1.97
CPSF2-203ENST00000554290 ADGRB2O60241 1585 aa27.35■■□□□ 1.97
CPSF2-203ENST00000554290 GJD4Q96KN9 370 aaPredicted RBP27.34■■□□□ 1.97
CPSF2-203ENST00000554290 ARHGEF10O15013 1369 aa27.34■■□□□ 1.97
CPSF2-203ENST00000554290 UNC5CLQ8IV45 518 aa27.33■■□□□ 1.97
CPSF2-203ENST00000554290 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
CPSF2-203ENST00000554290 CABLES1Q8TDN4 633 aa27.3■■□□□ 1.96
CPSF2-203ENST00000554290 PLEKHG5O94827 1062 aa27.29■■□□□ 1.96
CPSF2-203ENST00000554290 GPRASP1Q5JY77 1395 aa27.29■■□□□ 1.96
CPSF2-203ENST00000554290 SLIT2O94813 1529 aa27.29■■□□□ 1.96
CPSF2-203ENST00000554290 USP32Q8NFA0 1604 aa27.28■■□□□ 1.96
CPSF2-203ENST00000554290 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.96
CPSF2-203ENST00000554290 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
CPSF2-203ENST00000554290 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.24■■□□□ 1.95
CPSF2-203ENST00000554290 NGDNQ8NEJ9 315 aaKnown RBP27.23■■□□□ 1.95
CPSF2-203ENST00000554290 RALGAPBQ86X10 1494 aa27.22■■□□□ 1.95
CPSF2-203ENST00000554290 VPS72Q15906 364 aa27.2■■□□□ 1.94
CPSF2-203ENST00000554290 CCDC125Q86Z20 511 aa27.2■■□□□ 1.94
CPSF2-203ENST00000554290 FAM83GA6ND36 823 aa27.18■■□□□ 1.94
CPSF2-203ENST00000554290 NUDT16Q96DE0 195 aaKnown RBP27.18■■□□□ 1.94
CPSF2-203ENST00000554290 CCDC9Q9Y3X0 531 aaKnown RBP27.18■■□□□ 1.94
CPSF2-203ENST00000554290 ARHGEF28Q8N1W1 1705 aaKnown RBP27.17■■□□□ 1.94
CPSF2-203ENST00000554290 PAK3O75914 559 aaPredicted RBP27.17■■□□□ 1.94
CPSF2-203ENST00000554290 GLI3P10071 1580 aa27.17■■□□□ 1.94
CPSF2-203ENST00000554290 CDK19Q9BWU1 502 aa27.16■■□□□ 1.94
CPSF2-203ENST00000554290 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
CPSF2-203ENST00000554290 ABCA3Q99758 1704 aa27.14■■□□□ 1.94
CPSF2-203ENST00000554290 NWD2Q9ULI1 1742 aa27.13■■□□□ 1.93
CPSF2-203ENST00000554290 SEPT12Q8IYM1 358 aa27.13■■□□□ 1.93
CPSF2-203ENST00000554290 KIAA1210Q9ULL0 1709 aa27.13■■□□□ 1.93
CPSF2-203ENST00000554290 ATP7BP35670 1465 aa27.13■■□□□ 1.93
CPSF2-203ENST00000554290 PLCH1Q4KWH8 1693 aa27.12■■□□□ 1.93
CPSF2-203ENST00000554290 NBPF1Q3BBV0 1214 aa27.12■■□□□ 1.93
CPSF2-203ENST00000554290 ALS2Q96Q42 1657 aa27.11■■□□□ 1.93
CPSF2-203ENST00000554290 ONECUT3O60422 494 aaPredicted RBP27.11■■□□□ 1.93
CPSF2-203ENST00000554290 BTG4Q9NY30 223 aa27.1■■□□□ 1.93
CPSF2-203ENST00000554290 CCDC61Q9Y6R9 512 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms