RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 ATP7BP35670 1465 aa9.66□□□□□ -0.86
LINC00517-202ENST00000554257 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.87
LINC00517-202ENST00000554257 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.87
LINC00517-202ENST00000554257 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.87
LINC00517-202ENST00000554257 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
LINC00517-202ENST00000554257 HDGFP51858 240 aaKnown RBP9.64□□□□□ -0.87
LINC00517-202ENST00000554257 KIF1AQ12756 1690 aa9.64□□□□□ -0.87
LINC00517-202ENST00000554257 CARD11Q9BXL7 1154 aa9.63□□□□□ -0.87
LINC00517-202ENST00000554257 ADGRL3Q9HAR2 1447 aa9.63□□□□□ -0.87
LINC00517-202ENST00000554257 WASHC2AQ641Q2 1341 aa9.63□□□□□ -0.87
LINC00517-202ENST00000554257 ALS2Q96Q42 1657 aa9.63□□□□□ -0.87
LINC00517-202ENST00000554257 EIF3AQ14152 1382 aaKnown RBP9.62□□□□□ -0.87
LINC00517-202ENST00000554257 ST20-MTHFSA0A0A6YYL1 179 aa9.62□□□□□ -0.87
LINC00517-202ENST00000554257 SLC26A8Q96RN1 970 aa9.62□□□□□ -0.87
LINC00517-202ENST00000554257 ABCA3Q99758 1704 aa9.62□□□□□ -0.87
LINC00517-202ENST00000554257 CCDC7Q96M83 1385 aa9.62□□□□□ -0.87
LINC00517-202ENST00000554257 DCCP43146 1447 aa9.61□□□□□ -0.87
LINC00517-202ENST00000554257 PIK3C2AO00443 1686 aa9.61□□□□□ -0.87
LINC00517-202ENST00000554257 EIF4G2P78344 907 aaKnown RBP eCLIP9.61□□□□□ -0.87
LINC00517-202ENST00000554257 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
LINC00517-202ENST00000554257 KCNA6P17658 529 aa9.6□□□□□ -0.87
LINC00517-202ENST00000554257 CENPJQ9HC77 1338 aaPredicted RBP9.6□□□□□ -0.87
LINC00517-202ENST00000554257 AMOTL2Q9Y2J4 779 aa9.59□□□□□ -0.87
LINC00517-202ENST00000554257 IQSEC2Q5JU85 1478 aa9.59□□□□□ -0.87
LINC00517-202ENST00000554257 TRAK1Q9UPV9 953 aa9.59□□□□□ -0.87
LINC00517-202ENST00000554257 PUS7Q96PZ0 661 aaKnown RBP9.58□□□□□ -0.88
LINC00517-202ENST00000554257 ANKARQ7Z5J8 1434 aa9.58□□□□□ -0.88
LINC00517-202ENST00000554257 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
LINC00517-202ENST00000554257 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
LINC00517-202ENST00000554257 HIRIP3Q9BW71 556 aaPredicted RBP9.58□□□□□ -0.88
LINC00517-202ENST00000554257 MST1RQ04912 1400 aa9.58□□□□□ -0.88
LINC00517-202ENST00000554257 CPSF1Q10570 1443 aaKnown RBP9.58□□□□□ -0.88
LINC00517-202ENST00000554257 SSH2Q76I76 1423 aa9.57□□□□□ -0.88
LINC00517-202ENST00000554257 ZNF316A6NFI3 1004 aaPredicted RBP9.57□□□□□ -0.88
LINC00517-202ENST00000554257 PRR36Q9H6K5 1346 aa9.57□□□□□ -0.88
LINC00517-202ENST00000554257 ROBO1Q9Y6N7 1651 aa9.57□□□□□ -0.88
LINC00517-202ENST00000554257 ZNF335Q9H4Z2 1342 aaPredicted RBP9.56□□□□□ -0.88
LINC00517-202ENST00000554257 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
LINC00517-202ENST00000554257 SENP3Q9H4L4 574 aaPredicted RBP9.56□□□□□ -0.88
LINC00517-202ENST00000554257 COL22A1Q8NFW1 1626 aaPredicted RBP9.55□□□□□ -0.88
LINC00517-202ENST00000554257 AHDC1Q5TGY3 1603 aaPredicted RBP9.54□□□□□ -0.88
LINC00517-202ENST00000554257 POLR3AO14802 1390 aaPredicted RBP9.54□□□□□ -0.88
LINC00517-202ENST00000554257 STK26Q9P289 416 aa9.54□□□□□ -0.88
LINC00517-202ENST00000554257 TMEM94Q12767 1356 aa9.54□□□□□ -0.88
LINC00517-202ENST00000554257 SHPRHQ149N8 1683 aa9.53□□□□□ -0.88
LINC00517-202ENST00000554257 MED1Q15648 1581 aaPredicted RBP9.53□□□□□ -0.88
LINC00517-202ENST00000554257 C1orf167Q5SNV9 1468 aa9.53□□□□□ -0.88
LINC00517-202ENST00000554257 PXDNQ92626 1479 aa9.53□□□□□ -0.88
LINC00517-202ENST00000554257 COL16A1Q07092 1604 aaPredicted RBP9.53□□□□□ -0.88
LINC00517-202ENST00000554257 NINLQ9Y2I6 1382 aa9.52□□□□□ -0.88
LINC00517-202ENST00000554257 LTN1O94822 1766 aa9.52□□□□□ -0.89
LINC00517-202ENST00000554257 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
LINC00517-202ENST00000554257 PER1O15534 1290 aaPredicted RBP9.52□□□□□ -0.89
LINC00517-202ENST00000554257 MAP2P11137 1827 aaKnown RBP9.52□□□□□ -0.89
LINC00517-202ENST00000554257 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
LINC00517-202ENST00000554257 COL18A1P39060 1754 aa9.51□□□□□ -0.89
LINC00517-202ENST00000554257 PPIP5K1Q6PFW1 1433 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 DMRT2Q9Y5R5 561 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
LINC00517-202ENST00000554257 CDK19Q9BWU1 502 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 A0A1W2PP64 1363 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 ATAD2Q6PL18 1390 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 EVC2Q86UK5 1308 aa9.5□□□□□ -0.89
LINC00517-202ENST00000554257 TMF1P82094 1093 aa9.49□□□□□ -0.89
LINC00517-202ENST00000554257 PHLPP1O60346 1717 aa9.49□□□□□ -0.89
LINC00517-202ENST00000554257 SLIT3O75094 1523 aa9.49□□□□□ -0.89
LINC00517-202ENST00000554257 RGPD1P0DJD0 1748 aa9.49□□□□□ -0.89
LINC00517-202ENST00000554257 RGPD5Q99666 1765 aa9.49□□□□□ -0.89
LINC00517-202ENST00000554257 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 CAMTA1Q9Y6Y1 1673 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 NFAT5O94916 1531 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 USP6P35125 1406 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 CABP2Q9NPB3 220 aa9.48□□□□□ -0.89
LINC00517-202ENST00000554257 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
LINC00517-202ENST00000554257 RBM33Q96EV2 1170 aaKnown RBP9.47□□□□□ -0.89
LINC00517-202ENST00000554257 SLC24A1O60721 1099 aa9.47□□□□□ -0.89
LINC00517-202ENST00000554257 SAFB2Q14151 953 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00517-202ENST00000554257 OVOS2A0A0J9YW53 1432 aa9.46□□□□□ -0.89
LINC00517-202ENST00000554257 OVOS2Q6IE36 1432 aa9.46□□□□□ -0.89
LINC00517-202ENST00000554257 EDC4Q6P2E9 1401 aaKnown RBP9.46□□□□□ -0.9
LINC00517-202ENST00000554257 LMO7Q8WWI1 1683 aa9.46□□□□□ -0.9
LINC00517-202ENST00000554257 POGKQ9P215 609 aa9.46□□□□□ -0.9
LINC00517-202ENST00000554257 SMG6Q86US8 1419 aaKnown RBP9.45□□□□□ -0.9
LINC00517-202ENST00000554257 NUDT16Q96DE0 195 aaKnown RBP9.45□□□□□ -0.9
LINC00517-202ENST00000554257 BCANQ96GW7 911 aa9.45□□□□□ -0.9
LINC00517-202ENST00000554257 PARD3Q8TEW0 1356 aa9.45□□□□□ -0.9
LINC00517-202ENST00000554257 WNK3Q9BYP7 1800 aa9.45□□□□□ -0.9
LINC00517-202ENST00000554257 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
LINC00517-202ENST00000554257 C19orf44Q9H6X5 657 aa9.45□□□□□ -0.9
LINC00517-202ENST00000554257 AMER1Q5JTC6 1135 aaPredicted RBP9.44□□□□□ -0.9
LINC00517-202ENST00000554257 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
LINC00517-202ENST00000554257 NSD3Q9BZ95 1437 aa9.44□□□□□ -0.9
LINC00517-202ENST00000554257 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
LINC00517-202ENST00000554257 SLC12A5Q9H2X9 1139 aa9.44□□□□□ -0.9
LINC00517-202ENST00000554257 NRAPQ86VF7 1730 aa9.43□□□□□ -0.9
LINC00517-202ENST00000554257 MSH6P52701 1360 aa9.43□□□□□ -0.9
LINC00517-202ENST00000554257 BRD4O60885 1362 aaPredicted RBP9.42□□□□□ -0.9
LINC00517-202ENST00000554257 USP31Q70CQ4 1352 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms