RNA–Protein interactions for RNA: ENST00000554221.5

LINC00520-203, long intergenic non-protein coding RNA 520, humanhuman

TSL 3

Gene LINC00520, Length 348 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-203ENST00000554221 AFF2P51816 1311 aa9.76□□□□□ -0.85
LINC00520-203ENST00000554221 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
LINC00520-203ENST00000554221 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
LINC00520-203ENST00000554221 CCDC144AA2RUR9 1427 aa9.75□□□□□ -0.85
LINC00520-203ENST00000554221 MST1RQ04912 1400 aa9.75□□□□□ -0.85
LINC00520-203ENST00000554221 NEXMIFQ5QGS0 1516 aa9.75□□□□□ -0.85
LINC00520-203ENST00000554221 DCCP43146 1447 aa9.74□□□□□ -0.85
LINC00520-203ENST00000554221 SPHKAPQ2M3C7 1700 aa9.74□□□□□ -0.85
LINC00520-203ENST00000554221 FOXO3O43524 673 aa9.74□□□□□ -0.85
LINC00520-203ENST00000554221 XPCQ01831 940 aaPredicted RBP9.74□□□□□ -0.85
LINC00520-203ENST00000554221 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
LINC00520-203ENST00000554221 SETBP1Q9Y6X0 1596 aa9.74□□□□□ -0.85
LINC00520-203ENST00000554221 ADGRL3Q9HAR2 1447 aa9.73□□□□□ -0.85
LINC00520-203ENST00000554221 C1orf167Q5SNV9 1468 aa9.73□□□□□ -0.85
LINC00520-203ENST00000554221 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
LINC00520-203ENST00000554221 SAFB2Q14151 953 aaKnown RBP eCLIP9.73□□□□□ -0.85
LINC00520-203ENST00000554221 LRP6O75581 1613 aa9.73□□□□□ -0.85
LINC00520-203ENST00000554221 NRXN3Q9Y4C0 1643 aa9.72□□□□□ -0.85
LINC00520-203ENST00000554221 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
LINC00520-203ENST00000554221 SETD5Q9C0A6 1442 aa9.72□□□□□ -0.85
LINC00520-203ENST00000554221 ASXL1Q8IXJ9 1541 aa9.72□□□□□ -0.85
LINC00520-203ENST00000554221 UPF1Q92900 1129 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00520-203ENST00000554221 USP21Q9UK80 565 aa9.71□□□□□ -0.86
LINC00520-203ENST00000554221 ACIN1Q9UKV3 1341 aaKnown RBP9.71□□□□□ -0.86
LINC00520-203ENST00000554221 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.86
LINC00520-203ENST00000554221 ANKRD30BQ9BXX2 1392 aa9.71□□□□□ -0.86
LINC00520-203ENST00000554221 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
LINC00520-203ENST00000554221 RBM6P78332 1123 aaKnown RBP9.7□□□□□ -0.86
LINC00520-203ENST00000554221 RBM42Q9BTD8 480 aaKnown RBP9.7□□□□□ -0.86
LINC00520-203ENST00000554221 C14orf93Q9H972 538 aaKnown RBP9.7□□□□□ -0.86
LINC00520-203ENST00000554221 POGKQ9P215 609 aa9.7□□□□□ -0.86
LINC00520-203ENST00000554221 SOS2Q07890 1332 aaPredicted RBP9.7□□□□□ -0.86
LINC00520-203ENST00000554221 AHDC1Q5TGY3 1603 aaPredicted RBP9.7□□□□□ -0.86
LINC00520-203ENST00000554221 PTCH1Q13635 1447 aa9.69□□□□□ -0.86
LINC00520-203ENST00000554221 LMOD2Q6P5Q4 547 aa9.69□□□□□ -0.86
LINC00520-203ENST00000554221 KRT28Q7Z3Y7 464 aa9.69□□□□□ -0.86
LINC00520-203ENST00000554221 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
LINC00520-203ENST00000554221 DCAF11Q8TEB1 546 aa9.69□□□□□ -0.86
LINC00520-203ENST00000554221 LRPPRCP42704 1394 aaKnown RBP9.68□□□□□ -0.86
LINC00520-203ENST00000554221 DHX57Q6P158 1386 aaKnown RBP9.68□□□□□ -0.86
LINC00520-203ENST00000554221 ABCC11Q96J66 1382 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 PLEKHH1Q9ULM0 1364 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 PSME1Q06323 249 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 POLA2Q14181 598 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 PRAM1Q96QH2 718 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 KIF1BO60333 1816 aa9.68□□□□□ -0.86
LINC00520-203ENST00000554221 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
LINC00520-203ENST00000554221 RAB3GAP2Q9H2M9 1393 aa9.67□□□□□ -0.86
LINC00520-203ENST00000554221 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
LINC00520-203ENST00000554221 PMFBP1Q8TBY8 1022 aa9.67□□□□□ -0.86
LINC00520-203ENST00000554221 SIRT1Q96EB6 747 aa9.67□□□□□ -0.86
LINC00520-203ENST00000554221 TRPC5Q9UL62 973 aaPredicted RBP9.67□□□□□ -0.86
LINC00520-203ENST00000554221 SPATA31E1Q6ZUB1 1445 aa9.66□□□□□ -0.86
LINC00520-203ENST00000554221 HIRIP3Q9BW71 556 aaPredicted RBP9.66□□□□□ -0.86
LINC00520-203ENST00000554221 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
LINC00520-203ENST00000554221 PHF8Q9UPP1 1060 aa9.65□□□□□ -0.86
LINC00520-203ENST00000554221 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.87
LINC00520-203ENST00000554221 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
LINC00520-203ENST00000554221 MINK1Q8N4C8 1332 aaPredicted RBP9.63□□□□□ -0.87
LINC00520-203ENST00000554221 SPATA31A3Q5VYP0 1347 aa9.62□□□□□ -0.87
LINC00520-203ENST00000554221 SHPRHQ149N8 1683 aa9.62□□□□□ -0.87
LINC00520-203ENST00000554221 GJD4Q96KN9 370 aaPredicted RBP9.62□□□□□ -0.87
LINC00520-203ENST00000554221 FOXD4L1Q9NU39 408 aa9.62□□□□□ -0.87
LINC00520-203ENST00000554221 CCDC9Q9Y3X0 531 aaKnown RBP9.62□□□□□ -0.87
LINC00520-203ENST00000554221 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
LINC00520-203ENST00000554221 NALCNQ8IZF0 1738 aa9.62□□□□□ -0.87
LINC00520-203ENST00000554221 PAK3O75914 559 aaPredicted RBP9.61□□□□□ -0.87
LINC00520-203ENST00000554221 HRCP23327 699 aa9.61□□□□□ -0.87
LINC00520-203ENST00000554221 UNC5CLQ8IV45 518 aa9.61□□□□□ -0.87
LINC00520-203ENST00000554221 TECPR2O15040 1411 aa9.6□□□□□ -0.87
LINC00520-203ENST00000554221 PRAG1Q86YV5 1406 aa9.6□□□□□ -0.87
LINC00520-203ENST00000554221 NGDNQ8NEJ9 315 aaKnown RBP9.6□□□□□ -0.87
LINC00520-203ENST00000554221 PPLO60437 1756 aa9.6□□□□□ -0.87
LINC00520-203ENST00000554221 RGS12O14924 1447 aa9.59□□□□□ -0.87
LINC00520-203ENST00000554221 WASLO00401 505 aaPredicted RBP9.59□□□□□ -0.87
LINC00520-203ENST00000554221 NHSL1Q5SYE7 1610 aa9.59□□□□□ -0.87
LINC00520-203ENST00000554221 A0A0G2JS52 829 aa9.58□□□□□ -0.88
LINC00520-203ENST00000554221 FAM83GA6ND36 823 aa9.58□□□□□ -0.88
LINC00520-203ENST00000554221 MYT1Q01538 1121 aa9.58□□□□□ -0.88
LINC00520-203ENST00000554221 STAC3Q96MF2 364 aa9.58□□□□□ -0.88
LINC00520-203ENST00000554221 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
LINC00520-203ENST00000554221 PXDNQ92626 1479 aa9.58□□□□□ -0.88
LINC00520-203ENST00000554221 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
LINC00520-203ENST00000554221 ATAD2Q6PL18 1390 aa9.57□□□□□ -0.88
LINC00520-203ENST00000554221 CDC42BPGQ6DT37 1551 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 BCL9LQ86UU0 1499 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 GPRASP1Q5JY77 1395 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 SEPT12Q8IYM1 358 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 NUDT16Q96DE0 195 aaKnown RBP9.56□□□□□ -0.88
LINC00520-203ENST00000554221 CDK19Q9BWU1 502 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 ATRNO75882 1429 aa9.56□□□□□ -0.88
LINC00520-203ENST00000554221 MYOM2P54296 1465 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 NRXN1Q9ULB1 1477 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 VPS72Q15906 364 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 NBPF1Q3BBV0 1214 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 NUTM2GQ5VZR2 741 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 BTG4Q9NY30 223 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
LINC00520-203ENST00000554221 SBNO1A3KN83 1393 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms