RNA–Protein interactions for RNA: ENST00000554129.1

LINC01588-208, Transcript of long intergenic non-protein coding RNA 1588, human

TSL 2 BASIC

Gene LINC01588, Length 2,301 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01588-208	ENST00000554129	LAS1L	Q9Y4W2	734 aa	Known RBP	14.04	□□□□□ -0.16
LINC01588-208	ENST00000554129	SETD1B	Q9UPS6	1966 aa	Known RBP	14.04	□□□□□ -0.16
LINC01588-208	ENST00000554129	HDGF	P51858	240 aa	Known RBP	14.04	□□□□□ -0.16
LINC01588-208	ENST00000554129	THEMIS	Q8N1K5	641 aa	Predicted RBP	14.04	□□□□□ -0.16
LINC01588-208	ENST00000554129	TRAK1	Q9UPV9	953 aa		14.03	□□□□□ -0.16
LINC01588-208	ENST00000554129	CNGB1	Q14028	1251 aa	Predicted RBP	14.03	□□□□□ -0.16
LINC01588-208	ENST00000554129	RTN4	Q9NQC3	1192 aa	Known RBP	14.03	□□□□□ -0.16
LINC01588-208	ENST00000554129	BRD4	O60885	1362 aa	Predicted RBP	14.02	□□□□□ -0.16
LINC01588-208	ENST00000554129	ALK	Q9UM73	1620 aa		14.02	□□□□□ -0.16
LINC01588-208	ENST00000554129	TXNDC2	Q86VQ3	553 aa		14.02	□□□□□ -0.16
LINC01588-208	ENST00000554129	KTN1	Q86UP2	1357 aa	Known RBP	14.02	□□□□□ -0.17
LINC01588-208	ENST00000554129	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	14.02	□□□□□ -0.17
LINC01588-208	ENST00000554129	ASXL1	Q8IXJ9	1541 aa		14.01	□□□□□ -0.17
LINC01588-208	ENST00000554129	RCAN3	Q9UKA8	241 aa		14.01	□□□□□ -0.17
LINC01588-208	ENST00000554129	ARHGAP23	Q9P227	1491 aa		14.01	□□□□□ -0.17
LINC01588-208	ENST00000554129	SLIT1	O75093	1534 aa		14.01	□□□□□ -0.17
LINC01588-208	ENST00000554129	SENP3-EIF4A1	A0A087X0R7	540 aa		14.01	□□□□□ -0.17
LINC01588-208	ENST00000554129	NRXN3	Q9Y4C0	1643 aa		14	□□□□□ -0.17
LINC01588-208	ENST00000554129	KDM4F	A0A1W2PPD8	638 aa		14	□□□□□ -0.17
LINC01588-208	ENST00000554129	POLR3GL	Q9BT43	218 aa		14	□□□□□ -0.17
LINC01588-208	ENST00000554129	STK26	Q9P289	416 aa		13.99	□□□□□ -0.17
LINC01588-208	ENST00000554129	EID1	Q9Y6B2	187 aa		13.99	□□□□□ -0.17
LINC01588-208	ENST00000554129	EIF3A	Q14152	1382 aa	Known RBP	13.99	□□□□□ -0.17
LINC01588-208	ENST00000554129	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.99	□□□□□ -0.17
LINC01588-208	ENST00000554129	DISP3	Q9P2K9	1392 aa		13.99	□□□□□ -0.17
LINC01588-208	ENST00000554129	PDE3B	Q13370	1112 aa		13.98	□□□□□ -0.17
LINC01588-208	ENST00000554129	DDRGK1	Q96HY6	314 aa		13.98	□□□□□ -0.17
LINC01588-208	ENST00000554129	MET	P08581	1390 aa		13.97	□□□□□ -0.17
LINC01588-208	ENST00000554129	RALBP1	Q15311	655 aa		13.97	□□□□□ -0.17
LINC01588-208	ENST00000554129	SETD1A	O15047	1707 aa	Known RBP	13.97	□□□□□ -0.17
LINC01588-208	ENST00000554129	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.97	□□□□□ -0.17
LINC01588-208	ENST00000554129	TMF1	P82094	1093 aa		13.97	□□□□□ -0.17
LINC01588-208	ENST00000554129	PLEKHG1	Q9ULL1	1385 aa		13.96	□□□□□ -0.17
LINC01588-208	ENST00000554129	ZNF142	P52746	1687 aa	Predicted RBP	13.96	□□□□□ -0.17
LINC01588-208	ENST00000554129	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.96	□□□□□ -0.17
LINC01588-208	ENST00000554129	ADAMTS13	Q76LX8	1427 aa		13.96	□□□□□ -0.17
LINC01588-208	ENST00000554129	SLC26A8	Q96RN1	970 aa		13.96	□□□□□ -0.18
LINC01588-208	ENST00000554129	GSE1	Q14687	1217 aa		13.95	□□□□□ -0.18
LINC01588-208	ENST00000554129	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.94	□□□□□ -0.18
LINC01588-208	ENST00000554129	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
LINC01588-208	ENST00000554129	SBNO2	Q9Y2G9	1366 aa		13.93	□□□□□ -0.18
LINC01588-208	ENST00000554129	MED14	O60244	1454 aa		13.93	□□□□□ -0.18
LINC01588-208	ENST00000554129	ANKLE2	Q86XL3	938 aa		13.92	□□□□□ -0.18
LINC01588-208	ENST00000554129	PRAM1	Q96QH2	718 aa		13.92	□□□□□ -0.18
LINC01588-208	ENST00000554129	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.92	□□□□□ -0.18
LINC01588-208	ENST00000554129	ABCC11	Q96J66	1382 aa		13.91	□□□□□ -0.18
LINC01588-208	ENST00000554129	QRICH2	Q9H0J4	1663 aa		13.91	□□□□□ -0.18
LINC01588-208	ENST00000554129	NFKBIB	Q15653	356 aa		13.91	□□□□□ -0.18
LINC01588-208	ENST00000554129	BRPF3	Q9ULD4	1205 aa		13.91	□□□□□ -0.18
LINC01588-208	ENST00000554129	TBX22	Q9Y458	520 aa		13.91	□□□□□ -0.18
LINC01588-208	ENST00000554129	SLC24A1	O60721	1099 aa		13.9	□□□□□ -0.18
LINC01588-208	ENST00000554129	WAPL	Q7Z5K2	1190 aa		13.9	□□□□□ -0.18
LINC01588-208	ENST00000554129	NLRP13	Q86W25	1043 aa		13.9	□□□□□ -0.18
LINC01588-208	ENST00000554129	POGK	Q9P215	609 aa		13.9	□□□□□ -0.18
LINC01588-208	ENST00000554129	PARD3	Q8TEW0	1356 aa		13.89	□□□□□ -0.19
LINC01588-208	ENST00000554129	CDCA8	Q53HL2	280 aa		13.89	□□□□□ -0.19
LINC01588-208	ENST00000554129	INSR	P06213	1382 aa		13.88	□□□□□ -0.19
LINC01588-208	ENST00000554129	PLEKHH1	Q9ULM0	1364 aa		13.88	□□□□□ -0.19
LINC01588-208	ENST00000554129	PTPRU	Q92729	1446 aa		13.87	□□□□□ -0.19
LINC01588-208	ENST00000554129	UBE2Q2	Q8WVN8	375 aa		13.87	□□□□□ -0.19
LINC01588-208	ENST00000554129	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.87	□□□□□ -0.19
LINC01588-208	ENST00000554129	DLC1	Q96QB1	1528 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	CDCA7L	Q96GN5	454 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	NCKAP5L	Q9HCH0	1330 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	TECPR2	O15040	1411 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	FRAT1	Q92837	279 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	CRBN	Q96SW2	442 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	ROBO2	Q9HCK4	1378 aa		13.86	□□□□□ -0.19
LINC01588-208	ENST00000554129	AMOTL2	Q9Y2J4	779 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	PLIN1	O60240	522 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	HSPA2	P54652	639 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	SIRT1	Q96EB6	747 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	PANK3	Q9H999	370 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	EVC2	Q86UK5	1308 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	TULP4	Q9NRJ4	1543 aa		13.85	□□□□□ -0.19
LINC01588-208	ENST00000554129	BLM	P54132	1417 aa	Predicted RBP	13.84	□□□□□ -0.19
LINC01588-208	ENST00000554129	KDM2B	Q8NHM5	1336 aa		13.84	□□□□□ -0.19
LINC01588-208	ENST00000554129	PER1	O15534	1290 aa	Predicted RBP	13.84	□□□□□ -0.19
LINC01588-208	ENST00000554129	SKAP1	Q86WV1	359 aa		13.84	□□□□□ -0.19
LINC01588-208	ENST00000554129	DIP2A	Q14689	1571 aa		13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	FAM135B	Q49AJ0	1406 aa		13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	CABP2	Q9NPB3	220 aa		13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	KNDC1	Q76NI1	1749 aa		13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	CPS1	P31327	1500 aa		13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	NPHP4	O75161	1426 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC01588-208	ENST00000554129	MYOM1	P52179	1685 aa		13.82	□□□□□ -0.2
LINC01588-208	ENST00000554129	DAXX	Q9UER7	740 aa	Predicted RBP	13.82	□□□□□ -0.2
LINC01588-208	ENST00000554129	KCNA6	P17658	529 aa		13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	SLC4A3	P48751	1232 aa		13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	LMTK3	Q96Q04	1460 aa		13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	SRPK2	P78362	688 aa	Known RBP	13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	SLC12A5	Q9H2X9	1139 aa		13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	PIK3R4	Q99570	1358 aa		13.81	□□□□□ -0.2
LINC01588-208	ENST00000554129	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC01588-208	ENST00000554129	PUS7	Q96PZ0	661 aa	Known RBP	13.8	□□□□□ -0.2
LINC01588-208	ENST00000554129	CDK19	Q9BWU1	502 aa		13.8	□□□□□ -0.2
LINC01588-208	ENST00000554129	FAM161A	Q3B820	660 aa		13.8	□□□□□ -0.2
LINC01588-208	ENST00000554129	C8orf34	Q49A92	452 aa		13.79	□□□□□ -0.2
LINC01588-208	ENST00000554129	XRN1	Q8IZH2	1706 aa	Known RBP	13.78	□□□□□ -0.2
LINC01588-208	ENST00000554129	WASL	O00401	505 aa	Predicted RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms