RNA–Protein interactions for RNA: ENST00000554075.1

RPS29-204, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best)

Gene RPS29, Length 826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-204ENST00000554075 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
RPS29-204ENST00000554075 EVC2Q86UK5 1308 aa11.85□□□□□ -0.51
RPS29-204ENST00000554075 NWD1Q149M9 1564 aa11.84□□□□□ -0.51
RPS29-204ENST00000554075 PROSER2Q86WR7 435 aaPredicted RBP11.84□□□□□ -0.51
RPS29-204ENST00000554075 ROBO2Q9HCK4 1378 aa11.83□□□□□ -0.52
RPS29-204ENST00000554075 ZNF316A6NFI3 1004 aaPredicted RBP11.83□□□□□ -0.52
RPS29-204ENST00000554075 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
RPS29-204ENST00000554075 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
RPS29-204ENST00000554075 PTPRUQ92729 1446 aa11.82□□□□□ -0.52
RPS29-204ENST00000554075 HOXD11P31277 338 aaPredicted RBP11.81□□□□□ -0.52
RPS29-204ENST00000554075 SAFB2Q14151 953 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPS29-204ENST00000554075 CHD2O14647 1828 aaKnown RBP11.81□□□□□ -0.52
RPS29-204ENST00000554075 ARHGEF28Q8N1W1 1705 aaKnown RBP11.8□□□□□ -0.52
RPS29-204ENST00000554075 KCNA4P22459 653 aa11.8□□□□□ -0.52
RPS29-204ENST00000554075 SRPK2P78362 688 aaKnown RBP11.8□□□□□ -0.52
RPS29-204ENST00000554075 WAPLQ7Z5K2 1190 aa11.8□□□□□ -0.52
RPS29-204ENST00000554075 MINK1Q8N4C8 1332 aaPredicted RBP11.8□□□□□ -0.52
RPS29-204ENST00000554075 MSH6P52701 1360 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 ATF3P18847 181 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 TESK2Q96S53 571 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 C19orf44Q9H6X5 657 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 ZNF335Q9H4Z2 1342 aaPredicted RBP11.79□□□□□ -0.52
RPS29-204ENST00000554075 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
RPS29-204ENST00000554075 ADGRL3Q9HAR2 1447 aa11.78□□□□□ -0.52
RPS29-204ENST00000554075 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
RPS29-204ENST00000554075 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
RPS29-204ENST00000554075 TMEM94Q12767 1356 aa11.78□□□□□ -0.52
RPS29-204ENST00000554075 DCCP43146 1447 aa11.77□□□□□ -0.52
RPS29-204ENST00000554075 CADPS2Q86UW7 1296 aa11.77□□□□□ -0.53
RPS29-204ENST00000554075 POLR3GLQ9BT43 218 aa11.77□□□□□ -0.53
RPS29-204ENST00000554075 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.53
RPS29-204ENST00000554075 PLEKHH1Q9ULM0 1364 aa11.77□□□□□ -0.53
RPS29-204ENST00000554075 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
RPS29-204ENST00000554075 CDK19Q9BWU1 502 aa11.76□□□□□ -0.53
RPS29-204ENST00000554075 CCDC7Q96M83 1385 aa11.75□□□□□ -0.53
RPS29-204ENST00000554075 ANKARQ7Z5J8 1434 aa11.75□□□□□ -0.53
RPS29-204ENST00000554075 CCDC61Q9Y6R9 512 aa11.74□□□□□ -0.53
RPS29-204ENST00000554075 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
RPS29-204ENST00000554075 KIF7Q2M1P5 1343 aa11.73□□□□□ -0.53
RPS29-204ENST00000554075 LRRC7Q96NW7 1537 aa11.73□□□□□ -0.53
RPS29-204ENST00000554075 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
RPS29-204ENST00000554075 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
RPS29-204ENST00000554075 TULP4Q9NRJ4 1543 aa11.72□□□□□ -0.53
RPS29-204ENST00000554075 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
RPS29-204ENST00000554075 CABP2Q9NPB3 220 aa11.72□□□□□ -0.53
RPS29-204ENST00000554075 WASHC2AQ641Q2 1341 aa11.71□□□□□ -0.53
RPS29-204ENST00000554075 HDGFL2Q7Z4V5 671 aaPredicted RBP11.71□□□□□ -0.53
RPS29-204ENST00000554075 NUDT16Q96DE0 195 aaKnown RBP11.71□□□□□ -0.53
RPS29-204ENST00000554075 IQSEC2Q5JU85 1478 aa11.7□□□□□ -0.54
RPS29-204ENST00000554075 TOM1O60784 492 aa11.69□□□□□ -0.54
RPS29-204ENST00000554075 RBM33Q96EV2 1170 aaKnown RBP11.69□□□□□ -0.54
RPS29-204ENST00000554075 ZNF692Q9BU19 519 aaPredicted RBP11.69□□□□□ -0.54
RPS29-204ENST00000554075 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
RPS29-204ENST00000554075 LTBP4Q8N2S1 1624 aa11.68□□□□□ -0.54
RPS29-204ENST00000554075 NALCNQ8IZF0 1738 aa11.68□□□□□ -0.54
RPS29-204ENST00000554075 ATP7BP35670 1465 aa11.68□□□□□ -0.54
RPS29-204ENST00000554075 PPIP5K1Q6PFW1 1433 aa11.68□□□□□ -0.54
RPS29-204ENST00000554075 STRCP1A6NGW2 1772 aa11.67□□□□□ -0.54
RPS29-204ENST00000554075 ESCO1Q5FWF5 840 aa11.67□□□□□ -0.54
RPS29-204ENST00000554075 NGDNQ8NEJ9 315 aaKnown RBP11.67□□□□□ -0.54
RPS29-204ENST00000554075 ANKRD36BQ8N2N9 1353 aa11.67□□□□□ -0.54
RPS29-204ENST00000554075 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 C11orf95C9JLR9 678 aaPredicted RBP11.66□□□□□ -0.54
RPS29-204ENST00000554075 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
RPS29-204ENST00000554075 CABP1Q9NZU7 370 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 SLAIN2Q9P270 581 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 PHF8Q9UPP1 1060 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 KNSTRNQ9Y448 316 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 FMN2Q9NZ56 1722 aa11.66□□□□□ -0.54
RPS29-204ENST00000554075 BRD4O60885 1362 aaPredicted RBP11.66□□□□□ -0.54
RPS29-204ENST00000554075 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
RPS29-204ENST00000554075 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
RPS29-204ENST00000554075 C1orf167Q5SNV9 1468 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 MST1RQ04912 1400 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 PSME1Q06323 249 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 SLC12A5Q9H2X9 1139 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 PANK3Q9H999 370 aa11.64□□□□□ -0.55
RPS29-204ENST00000554075 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
RPS29-204ENST00000554075 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
RPS29-204ENST00000554075 PRR36Q9H6K5 1346 aa11.63□□□□□ -0.55
RPS29-204ENST00000554075 KTN1Q86UP2 1357 aaKnown RBP11.63□□□□□ -0.55
RPS29-204ENST00000554075 KIF1AQ12756 1690 aa11.62□□□□□ -0.55
RPS29-204ENST00000554075 POLR3AO14802 1390 aaPredicted RBP11.62□□□□□ -0.55
RPS29-204ENST00000554075 ACEP12821 1306 aa11.61□□□□□ -0.55
RPS29-204ENST00000554075 UBAP1LF5GYI3 381 aa11.61□□□□□ -0.55
RPS29-204ENST00000554075 NSD2O96028 1365 aa11.61□□□□□ -0.55
RPS29-204ENST00000554075 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
RPS29-204ENST00000554075 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
RPS29-204ENST00000554075 A0A1W2PP64 1363 aa11.6□□□□□ -0.55
RPS29-204ENST00000554075 ANP32CO43423 234 aa11.6□□□□□ -0.55
RPS29-204ENST00000554075 DIEXFQ68CQ4 756 aaKnown RBP11.6□□□□□ -0.55
RPS29-204ENST00000554075 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
RPS29-204ENST00000554075 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
RPS29-204ENST00000554075 TOPAZ1Q8N9V7 1692 aa11.59□□□□□ -0.55
RPS29-204ENST00000554075 NSD3Q9BZ95 1437 aa11.59□□□□□ -0.55
RPS29-204ENST00000554075 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
RPS29-204ENST00000554075 FOXO3O43524 673 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms