RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NRXN3Q9Y4C0 1643 aa14.48□□□□□ -0.09
TMEM55B-205ENST00000554028 EVC2Q86UK5 1308 aa14.47□□□□□ -0.09
TMEM55B-205ENST00000554028 ASXL1Q8IXJ9 1541 aa14.47□□□□□ -0.09
TMEM55B-205ENST00000554028 LMTK3Q96Q04 1460 aa14.47□□□□□ -0.09
TMEM55B-205ENST00000554028 DLC1Q96QB1 1528 aa14.46□□□□□ -0.09
TMEM55B-205ENST00000554028 FAM135BQ49AJ0 1406 aa14.46□□□□□ -0.09
TMEM55B-205ENST00000554028 TECPR2O15040 1411 aa14.45□□□□□ -0.1
TMEM55B-205ENST00000554028 WAPLQ7Z5K2 1190 aa14.45□□□□□ -0.1
TMEM55B-205ENST00000554028 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
TMEM55B-205ENST00000554028 KCNA6P17658 529 aa14.44□□□□□ -0.1
TMEM55B-205ENST00000554028 PUS7Q96PZ0 661 aaKnown RBP14.44□□□□□ -0.1
TMEM55B-205ENST00000554028 DISP3Q9P2K9 1392 aa14.43□□□□□ -0.1
TMEM55B-205ENST00000554028 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
TMEM55B-205ENST00000554028 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
TMEM55B-205ENST00000554028 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
TMEM55B-205ENST00000554028 POLR1AO95602 1720 aaPredicted RBP14.41□□□□□ -0.1
TMEM55B-205ENST00000554028 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
TMEM55B-205ENST00000554028 PTCH1Q13635 1447 aa14.4□□□□□ -0.1
TMEM55B-205ENST00000554028 ARHGEF28Q8N1W1 1705 aaKnown RBP14.39□□□□□ -0.11
TMEM55B-205ENST00000554028 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
TMEM55B-205ENST00000554028 CPS1P31327 1500 aa14.39□□□□□ -0.11
TMEM55B-205ENST00000554028 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
TMEM55B-205ENST00000554028 WASLO00401 505 aaPredicted RBP14.38□□□□□ -0.11
TMEM55B-205ENST00000554028 TMC1Q8TDI8 760 aa14.38□□□□□ -0.11
TMEM55B-205ENST00000554028 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 ANP32CO43423 234 aa14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 C14orf37Q86TY3 774 aa14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 PROSER2Q86WR7 435 aaPredicted RBP14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 KNDC1Q76NI1 1749 aa14.37□□□□□ -0.11
TMEM55B-205ENST00000554028 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
TMEM55B-205ENST00000554028 PANK3Q9H999 370 aa14.34□□□□□ -0.11
TMEM55B-205ENST00000554028 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
TMEM55B-205ENST00000554028 FBXO41Q8TF61 875 aa14.33□□□□□ -0.12
TMEM55B-205ENST00000554028 TERF2IPQ9NYB0 399 aa14.32□□□□□ -0.12
TMEM55B-205ENST00000554028 KNSTRNQ9Y448 316 aa14.32□□□□□ -0.12
TMEM55B-205ENST00000554028 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
TMEM55B-205ENST00000554028 XRN1Q8IZH2 1706 aaKnown RBP14.32□□□□□ -0.12
TMEM55B-205ENST00000554028 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 NUDT16Q96DE0 195 aaKnown RBP14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 SLC12A5Q9H2X9 1139 aa14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 CHD2O14647 1828 aaKnown RBP14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 NKTRP30414 1462 aaKnown RBP14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 TULP4Q9NRJ4 1543 aa14.31□□□□□ -0.12
TMEM55B-205ENST00000554028 C19orf44Q9H6X5 657 aa14.29□□□□□ -0.12
TMEM55B-205ENST00000554028 CABP1Q9NZU7 370 aa14.29□□□□□ -0.12
TMEM55B-205ENST00000554028 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
TMEM55B-205ENST00000554028 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
TMEM55B-205ENST00000554028 STRCQ7RTU9 1775 aa14.28□□□□□ -0.12
TMEM55B-205ENST00000554028 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
TMEM55B-205ENST00000554028 NUTM2FA1L443 756 aa14.27□□□□□ -0.13
TMEM55B-205ENST00000554028 ATF3P18847 181 aa14.27□□□□□ -0.13
TMEM55B-205ENST00000554028 MIER1Q8N108 512 aa14.27□□□□□ -0.13
TMEM55B-205ENST00000554028 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 ADGRL3Q9HAR2 1447 aa14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 TMEM94Q12767 1356 aa14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 ZNF335Q9H4Z2 1342 aaPredicted RBP14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 PER1O15534 1290 aaPredicted RBP14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 ZNF692Q9BU19 519 aaPredicted RBP14.26□□□□□ -0.13
TMEM55B-205ENST00000554028 ANKRD36BQ8N2N9 1353 aa14.25□□□□□ -0.13
TMEM55B-205ENST00000554028 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.25□□□□□ -0.13
TMEM55B-205ENST00000554028 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
TMEM55B-205ENST00000554028 ANKARQ7Z5J8 1434 aa14.24□□□□□ -0.13
TMEM55B-205ENST00000554028 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
TMEM55B-205ENST00000554028 CADPS2Q86UW7 1296 aa14.24□□□□□ -0.13
TMEM55B-205ENST00000554028 MSH6P52701 1360 aa14.23□□□□□ -0.13
TMEM55B-205ENST00000554028 KTN1Q86UP2 1357 aaKnown RBP14.23□□□□□ -0.13
TMEM55B-205ENST00000554028 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
TMEM55B-205ENST00000554028 RALBP1Q15311 655 aa14.23□□□□□ -0.13
TMEM55B-205ENST00000554028 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
TMEM55B-205ENST00000554028 CGNL1Q0VF96 1302 aa14.22□□□□□ -0.13
TMEM55B-205ENST00000554028 PRR36Q9H6K5 1346 aa14.22□□□□□ -0.13
TMEM55B-205ENST00000554028 NGDNQ8NEJ9 315 aaKnown RBP14.22□□□□□ -0.13
TMEM55B-205ENST00000554028 CARD14Q9BXL6 1004 aa14.22□□□□□ -0.13
TMEM55B-205ENST00000554028 ATP7BP35670 1465 aa14.21□□□□□ -0.13
TMEM55B-205ENST00000554028 CC2D1BQ5T0F9 858 aaKnown RBP14.21□□□□□ -0.13
TMEM55B-205ENST00000554028 CDC42BPGQ6DT37 1551 aa14.21□□□□□ -0.14
TMEM55B-205ENST00000554028 CCER2I3L3R5 266 aa14.2□□□□□ -0.14
TMEM55B-205ENST00000554028 ESCO1Q5FWF5 840 aa14.2□□□□□ -0.14
TMEM55B-205ENST00000554028 NSD3Q9BZ95 1437 aa14.2□□□□□ -0.14
TMEM55B-205ENST00000554028 A0A1W2PP64 1363 aa14.2□□□□□ -0.14
TMEM55B-205ENST00000554028 NPC1L1Q9UHC9 1359 aa14.2□□□□□ -0.14
TMEM55B-205ENST00000554028 DCCP43146 1447 aa14.19□□□□□ -0.14
TMEM55B-205ENST00000554028 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
TMEM55B-205ENST00000554028 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
TMEM55B-205ENST00000554028 PHF8Q9UPP1 1060 aa14.19□□□□□ -0.14
TMEM55B-205ENST00000554028 ACEP12821 1306 aa14.18□□□□□ -0.14
TMEM55B-205ENST00000554028 NCBP3Q53F19 620 aaKnown RBP14.18□□□□□ -0.14
TMEM55B-205ENST00000554028 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
TMEM55B-205ENST00000554028 MYOM1P52179 1685 aa14.17□□□□□ -0.14
TMEM55B-205ENST00000554028 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
TMEM55B-205ENST00000554028 NSD2O96028 1365 aa14.17□□□□□ -0.14
TMEM55B-205ENST00000554028 CPSF1Q10570 1443 aaKnown RBP14.16□□□□□ -0.14
TMEM55B-205ENST00000554028 PSME1Q06323 249 aa14.16□□□□□ -0.14
TMEM55B-205ENST00000554028 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.16□□□□□ -0.14
TMEM55B-205ENST00000554028 MYBBP1AQ9BQG0 1328 aaKnown RBP14.15□□□□□ -0.14
TMEM55B-205ENST00000554028 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
TMEM55B-205ENST00000554028 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
TMEM55B-205ENST00000554028 CD163L1Q9NR16 1453 aa14.14□□□□□ -0.15
TMEM55B-205ENST00000554028 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms