RNA–Protein interactions for RNA: ENST00000553597.5

SNRPN-206, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

TSL 3

Gene SNRPN, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-206ENST00000553597 PTCH1Q13635 1447 aa11.47□□□□□ -0.57
SNRPN-206ENST00000553597 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
SNRPN-206ENST00000553597 DLC1Q96QB1 1528 aa11.45□□□□□ -0.58
SNRPN-206ENST00000553597 WAPLQ7Z5K2 1190 aa11.45□□□□□ -0.58
SNRPN-206ENST00000553597 STAC3Q96MF2 364 aa11.45□□□□□ -0.58
SNRPN-206ENST00000553597 FMN2Q9NZ56 1722 aa11.45□□□□□ -0.58
SNRPN-206ENST00000553597 TECPR2O15040 1411 aa11.44□□□□□ -0.58
SNRPN-206ENST00000553597 ADGRL3Q9HAR2 1447 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 MSH6P52701 1360 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 PRAM1Q96QH2 718 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 POGKQ9P215 609 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 ROBO1Q9Y6N7 1651 aa11.43□□□□□ -0.58
SNRPN-206ENST00000553597 ABCC11Q96J66 1382 aa11.42□□□□□ -0.58
SNRPN-206ENST00000553597 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
SNRPN-206ENST00000553597 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
SNRPN-206ENST00000553597 UBAP1LF5GYI3 381 aa11.42□□□□□ -0.58
SNRPN-206ENST00000553597 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
SNRPN-206ENST00000553597 HIRIP3Q9BW71 556 aaPredicted RBP11.42□□□□□ -0.58
SNRPN-206ENST00000553597 CARD11Q9BXL7 1154 aa11.42□□□□□ -0.58
SNRPN-206ENST00000553597 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
SNRPN-206ENST00000553597 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
SNRPN-206ENST00000553597 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
SNRPN-206ENST00000553597 ITSN1Q15811 1721 aa11.4□□□□□ -0.58
SNRPN-206ENST00000553597 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
SNRPN-206ENST00000553597 GPRASP1Q5JY77 1395 aa11.39□□□□□ -0.59
SNRPN-206ENST00000553597 ATF3P18847 181 aa11.38□□□□□ -0.59
SNRPN-206ENST00000553597 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
SNRPN-206ENST00000553597 EIF3AQ14152 1382 aaKnown RBP11.38□□□□□ -0.59
SNRPN-206ENST00000553597 PHLPP1O60346 1717 aa11.38□□□□□ -0.59
SNRPN-206ENST00000553597 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
SNRPN-206ENST00000553597 TULP4Q9NRJ4 1543 aa11.37□□□□□ -0.59
SNRPN-206ENST00000553597 DCCP43146 1447 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 MST1RQ04912 1400 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 C19orf44Q9H6X5 657 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 USP47Q96K76 1375 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
SNRPN-206ENST00000553597 TOM1O60784 492 aa11.35□□□□□ -0.59
SNRPN-206ENST00000553597 NHSL1Q5SYE7 1610 aa11.35□□□□□ -0.59
SNRPN-206ENST00000553597 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
SNRPN-206ENST00000553597 CADPS2Q86UW7 1296 aa11.33□□□□□ -0.6
SNRPN-206ENST00000553597 C1orf167Q5SNV9 1468 aa11.32□□□□□ -0.6
SNRPN-206ENST00000553597 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
SNRPN-206ENST00000553597 ATP7BP35670 1465 aa11.32□□□□□ -0.6
SNRPN-206ENST00000553597 ST20-MTHFSA0A0A6YYL1 179 aa11.31□□□□□ -0.6
SNRPN-206ENST00000553597 SRPK2P78362 688 aaKnown RBP11.31□□□□□ -0.6
SNRPN-206ENST00000553597 DDX17Q92841 729 aaKnown RBP11.31□□□□□ -0.6
SNRPN-206ENST00000553597 SLAIN2Q9P270 581 aa11.31□□□□□ -0.6
SNRPN-206ENST00000553597 WASLO00401 505 aaPredicted RBP11.3□□□□□ -0.6
SNRPN-206ENST00000553597 ESCO1Q5FWF5 840 aa11.3□□□□□ -0.6
SNRPN-206ENST00000553597 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
SNRPN-206ENST00000553597 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
SNRPN-206ENST00000553597 PRR36Q9H6K5 1346 aa11.3□□□□□ -0.6
SNRPN-206ENST00000553597 MYOM1P52179 1685 aa11.3□□□□□ -0.6
SNRPN-206ENST00000553597 AKAP12Q02952 1782 aa11.29□□□□□ -0.6
SNRPN-206ENST00000553597 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
SNRPN-206ENST00000553597 AHDC1Q5TGY3 1603 aaPredicted RBP11.29□□□□□ -0.6
SNRPN-206ENST00000553597 HSPA5P11021 654 aaKnown RBP11.29□□□□□ -0.6
SNRPN-206ENST00000553597 BRINP3Q76B58 766 aa11.29□□□□□ -0.6
SNRPN-206ENST00000553597 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
SNRPN-206ENST00000553597 CDK19Q9BWU1 502 aa11.29□□□□□ -0.6
SNRPN-206ENST00000553597 DISP3Q9P2K9 1392 aa11.28□□□□□ -0.6
SNRPN-206ENST00000553597 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
SNRPN-206ENST00000553597 PMFBP1Q8TBY8 1022 aa11.28□□□□□ -0.6
SNRPN-206ENST00000553597 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
SNRPN-206ENST00000553597 ANKARQ7Z5J8 1434 aa11.27□□□□□ -0.6
SNRPN-206ENST00000553597 EIF4G2P78344 907 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNRPN-206ENST00000553597 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
SNRPN-206ENST00000553597 TRPM3Q9HCF6 1732 aaPredicted RBP11.26□□□□□ -0.61
SNRPN-206ENST00000553597 HSPA1LP34931 641 aa11.26□□□□□ -0.61
SNRPN-206ENST00000553597 NUDT16Q96DE0 195 aaKnown RBP11.26□□□□□ -0.61
SNRPN-206ENST00000553597 MON2Q7Z3U7 1717 aa11.26□□□□□ -0.61
SNRPN-206ENST00000553597 PLEKHG5O94827 1062 aa11.25□□□□□ -0.61
SNRPN-206ENST00000553597 TESK2Q96S53 571 aa11.25□□□□□ -0.61
SNRPN-206ENST00000553597 PHF8Q9UPP1 1060 aa11.25□□□□□ -0.61
SNRPN-206ENST00000553597 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
SNRPN-206ENST00000553597 FOXO3O43524 673 aa11.24□□□□□ -0.61
SNRPN-206ENST00000553597 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
SNRPN-206ENST00000553597 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
SNRPN-206ENST00000553597 DCAF8L1A6NGE4 600 aa11.23□□□□□ -0.61
SNRPN-206ENST00000553597 NGDNQ8NEJ9 315 aaKnown RBP11.23□□□□□ -0.61
SNRPN-206ENST00000553597 PXDNQ92626 1479 aa11.23□□□□□ -0.61
SNRPN-206ENST00000553597 NRKQ7Z2Y5 1582 aa11.23□□□□□ -0.61
SNRPN-206ENST00000553597 TMF1P82094 1093 aa11.22□□□□□ -0.61
SNRPN-206ENST00000553597 TMC1Q8TDI8 760 aa11.22□□□□□ -0.61
SNRPN-206ENST00000553597 ALS2Q96Q42 1657 aa11.22□□□□□ -0.61
SNRPN-206ENST00000553597 KIF20BQ96Q89 1820 aa11.22□□□□□ -0.61
SNRPN-206ENST00000553597 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
SNRPN-206ENST00000553597 ZEB1P37275 1124 aaPredicted RBP11.21□□□□□ -0.61
SNRPN-206ENST00000553597 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
SNRPN-206ENST00000553597 ACEP12821 1306 aa11.2□□□□□ -0.62
SNRPN-206ENST00000553597 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
SNRPN-206ENST00000553597 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
SNRPN-206ENST00000553597 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
SNRPN-206ENST00000553597 PHRF1Q9P1Y6 1649 aaKnown RBP11.2□□□□□ -0.62
SNRPN-206ENST00000553597 MARF1Q9Y4F3 1742 aaKnown RBP11.19□□□□□ -0.62
SNRPN-206ENST00000553597 CRYBG1Q9Y4K1 1723 aa11.19□□□□□ -0.62
SNRPN-206ENST00000553597 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
SNRPN-206ENST00000553597 PSME1Q06323 249 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms