RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 MYT1LQ9UL68 1186 aa10.18□□□□□ -0.78
ATXN3-221ENST00000553498 KIF3BO15066 747 aa10.17□□□□□ -0.78
ATXN3-221ENST00000553498 FAM163AQ96GL9 167 aaPredicted RBP10.17□□□□□ -0.78
ATXN3-221ENST00000553498 TRPM2O94759 1503 aa10.17□□□□□ -0.78
ATXN3-221ENST00000553498 ROCK2O75116 1388 aaKnown RBP10.16□□□□□ -0.78
ATXN3-221ENST00000553498 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 RIMBP3CA6NJZ7 1639 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 RIMBP3BA6NNM3 1639 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 RIMBP3Q9UFD9 1639 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 KIF3CO14782 793 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 DCAF11Q8TEB1 546 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 RYDENQ9NUL5 291 aaKnown RBP10.16□□□□□ -0.78
ATXN3-221ENST00000553498 PRAG1Q86YV5 1406 aa10.16□□□□□ -0.78
ATXN3-221ENST00000553498 USP47Q96K76 1375 aa10.15□□□□□ -0.78
ATXN3-221ENST00000553498 CCDC7Q96M83 1385 aa10.15□□□□□ -0.78
ATXN3-221ENST00000553498 WASHC2AQ641Q2 1341 aa10.15□□□□□ -0.78
ATXN3-221ENST00000553498 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.78
ATXN3-221ENST00000553498 MAP3K4Q9Y6R4 1608 aa10.15□□□□□ -0.79
ATXN3-221ENST00000553498 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
ATXN3-221ENST00000553498 TET3O43151 1660 aa10.14□□□□□ -0.79
ATXN3-221ENST00000553498 RNF17Q9BXT8 1623 aaKnown RBP10.13□□□□□ -0.79
ATXN3-221ENST00000553498 CNTLNQ9NXG0 1405 aa10.13□□□□□ -0.79
ATXN3-221ENST00000553498 BCORL1Q5H9F3 1711 aa10.13□□□□□ -0.79
ATXN3-221ENST00000553498 KIDINS220Q9ULH0 1771 aa10.12□□□□□ -0.79
ATXN3-221ENST00000553498 HOXB3P14651 431 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-221ENST00000553498 FAM69CQ0P6D2 419 aa10.12□□□□□ -0.79
ATXN3-221ENST00000553498 HIRIP3Q9BW71 556 aaPredicted RBP10.12□□□□□ -0.79
ATXN3-221ENST00000553498 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
ATXN3-221ENST00000553498 ZMYM4Q5VZL5 1548 aa10.12□□□□□ -0.79
ATXN3-221ENST00000553498 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
ATXN3-221ENST00000553498 ARHGAP31Q2M1Z3 1444 aa10.11□□□□□ -0.79
ATXN3-221ENST00000553498 ZNF326Q5BKZ1 582 aaKnown RBP10.11□□□□□ -0.79
ATXN3-221ENST00000553498 KIF7Q2M1P5 1343 aa10.1□□□□□ -0.79
ATXN3-221ENST00000553498 DIP2BQ9P265 1576 aa10.1□□□□□ -0.79
ATXN3-221ENST00000553498 C2orf72A6NCS6 295 aa10.1□□□□□ -0.79
ATXN3-221ENST00000553498 ST18O60284 1047 aa10.1□□□□□ -0.79
ATXN3-221ENST00000553498 LAMC1P11047 1609 aa10.1□□□□□ -0.79
ATXN3-221ENST00000553498 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
ATXN3-221ENST00000553498 SNPHO15079 494 aa10.09□□□□□ -0.79
ATXN3-221ENST00000553498 RAPGEF3O95398 923 aa10.09□□□□□ -0.79
ATXN3-221ENST00000553498 KDM2AQ9Y2K7 1162 aa10.09□□□□□ -0.79
ATXN3-221ENST00000553498 RPGRIP1LQ68CZ1 1315 aa10.08□□□□□ -0.8
ATXN3-221ENST00000553498 RGL3Q3MIN7 710 aa10.08□□□□□ -0.8
ATXN3-221ENST00000553498 MYOM2P54296 1465 aa10.08□□□□□ -0.8
ATXN3-221ENST00000553498 REREQ9P2R6 1566 aa10.08□□□□□ -0.8
ATXN3-221ENST00000553498 WASHC2CQ9Y4E1 1318 aa10.07□□□□□ -0.8
ATXN3-221ENST00000553498 E9PCH4 1651 aa10.07□□□□□ -0.8
ATXN3-221ENST00000553498 DIP2CQ9Y2E4 1556 aa10.07□□□□□ -0.8
ATXN3-221ENST00000553498 KTN1Q86UP2 1357 aaKnown RBP10.07□□□□□ -0.8
ATXN3-221ENST00000553498 PCDH10Q9P2E7 1040 aa10.07□□□□□ -0.8
ATXN3-221ENST00000553498 ABCA6Q8N139 1617 aa10.06□□□□□ -0.8
ATXN3-221ENST00000553498 ABCC3O15438 1527 aa10.06□□□□□ -0.8
ATXN3-221ENST00000553498 AGLP35573 1532 aa10.06□□□□□ -0.8
ATXN3-221ENST00000553498 NPATQ14207 1427 aa10.06□□□□□ -0.8
ATXN3-221ENST00000553498 C11orf95C9JLR9 678 aaPredicted RBP10.05□□□□□ -0.8
ATXN3-221ENST00000553498 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
ATXN3-221ENST00000553498 GGT6Q6P531 493 aa10.05□□□□□ -0.8
ATXN3-221ENST00000553498 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
ATXN3-221ENST00000553498 SLC52A1Q9NWF4 448 aa10.05□□□□□ -0.8
ATXN3-221ENST00000553498 NOS1P29475 1434 aa10.05□□□□□ -0.8
ATXN3-221ENST00000553498 TRPM1Q7Z4N2 1603 aa10.04□□□□□ -0.8
ATXN3-221ENST00000553498 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
ATXN3-221ENST00000553498 ST20-MTHFSA0A0A6YYL1 179 aa10.04□□□□□ -0.8
ATXN3-221ENST00000553498 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
ATXN3-221ENST00000553498 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
ATXN3-221ENST00000553498 ZC3H13Q5T200 1668 aaKnown RBP10.03□□□□□ -0.8
ATXN3-221ENST00000553498 RICTORQ6R327 1708 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 SPRYD3Q8NCJ5 442 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 CRISPLD2Q9H0B8 497 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-221ENST00000553498 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
ATXN3-221ENST00000553498 CLTCL1P53675 1640 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 SCAF11Q99590 1463 aaKnown RBP10.03□□□□□ -0.8
ATXN3-221ENST00000553498 NRXN1Q9ULB1 1477 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 NCKAP5LQ9HCH0 1330 aa10.03□□□□□ -0.8
ATXN3-221ENST00000553498 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
ATXN3-221ENST00000553498 TMF1P82094 1093 aa10.02□□□□□ -0.81
ATXN3-221ENST00000553498 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
ATXN3-221ENST00000553498 TMC2Q8TDI7 906 aa10.02□□□□□ -0.81
ATXN3-221ENST00000553498 PPRC1Q5VV67 1664 aaKnown RBP10.02□□□□□ -0.81
ATXN3-221ENST00000553498 ADGRB3O60242 1522 aa10.02□□□□□ -0.81
ATXN3-221ENST00000553498 FOXK1P85037 733 aa10.01□□□□□ -0.81
ATXN3-221ENST00000553498 NBPF1Q3BBV0 1214 aa10.01□□□□□ -0.81
ATXN3-221ENST00000553498 MADDQ8WXG6 1647 aa10□□□□□ -0.81
ATXN3-221ENST00000553498 COL17A1Q9UMD9 1497 aaPredicted RBP10□□□□□ -0.81
ATXN3-221ENST00000553498 CEP152O94986 1710 aa10□□□□□ -0.81
ATXN3-221ENST00000553498 DOK7Q18PE1 504 aa10□□□□□ -0.81
ATXN3-221ENST00000553498 TESK2Q96S53 571 aa10□□□□□ -0.81
ATXN3-221ENST00000553498 ZFYVE9O95405 1425 aa9.99□□□□□ -0.81
ATXN3-221ENST00000553498 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-221ENST00000553498 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
ATXN3-221ENST00000553498 KIAA1210Q9ULL0 1709 aa9.99□□□□□ -0.81
ATXN3-221ENST00000553498 DSG2Q14126 1118 aa9.98□□□□□ -0.81
ATXN3-221ENST00000553498 RALBP1Q15311 655 aa9.98□□□□□ -0.81
ATXN3-221ENST00000553498 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
ATXN3-221ENST00000553498 CAMSAP1Q5T5Y3 1602 aa9.97□□□□□ -0.81
ATXN3-221ENST00000553498 GPR153Q6NV75 609 aa9.97□□□□□ -0.81
ATXN3-221ENST00000553498 SLC34A2O95436 690 aa9.96□□□□□ -0.82
ATXN3-221ENST00000553498 HOXB1P14653 301 aaPredicted RBP9.96□□□□□ -0.82
ATXN3-221ENST00000553498 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms