RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 STK26Q9P289 416 aa14.64□□□□□ -0.07
CALCOCO1-222ENST00000553154 ROBO1Q9Y6N7 1651 aa14.64□□□□□ -0.07
CALCOCO1-222ENST00000553154 NBPF1Q3BBV0 1214 aa14.63□□□□□ -0.07
CALCOCO1-222ENST00000553154 WAPLQ7Z5K2 1190 aa14.63□□□□□ -0.07
CALCOCO1-222ENST00000553154 CADPS2Q86UW7 1296 aa14.63□□□□□ -0.07
CALCOCO1-222ENST00000553154 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
CALCOCO1-222ENST00000553154 RALGAPBQ86X10 1494 aa14.63□□□□□ -0.07
CALCOCO1-222ENST00000553154 SLAIN2Q9P270 581 aa14.62□□□□□ -0.07
CALCOCO1-222ENST00000553154 C1orf167Q5SNV9 1468 aa14.62□□□□□ -0.07
CALCOCO1-222ENST00000553154 TONSLQ96HA7 1378 aa14.61□□□□□ -0.07
CALCOCO1-222ENST00000553154 AHDC1Q5TGY3 1603 aaPredicted RBP14.61□□□□□ -0.07
CALCOCO1-222ENST00000553154 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
CALCOCO1-222ENST00000553154 FMN2Q9NZ56 1722 aa14.61□□□□□ -0.07
CALCOCO1-222ENST00000553154 PIP4K2BP78356 416 aa14.6□□□□□ -0.07
CALCOCO1-222ENST00000553154 PRAM1Q96QH2 718 aa14.6□□□□□ -0.07
CALCOCO1-222ENST00000553154 COL16A1Q07092 1604 aaPredicted RBP14.59□□□□□ -0.07
CALCOCO1-222ENST00000553154 ATF3P18847 181 aa14.58□□□□□ -0.08
CALCOCO1-222ENST00000553154 BRINP3Q76B58 766 aa14.58□□□□□ -0.08
CALCOCO1-222ENST00000553154 C14orf37Q86TY3 774 aa14.58□□□□□ -0.08
CALCOCO1-222ENST00000553154 TRAK1Q9UPV9 953 aa14.58□□□□□ -0.08
CALCOCO1-222ENST00000553154 NHSL1Q5SYE7 1610 aa14.58□□□□□ -0.08
CALCOCO1-222ENST00000553154 USP32Q8NFA0 1604 aa14.57□□□□□ -0.08
CALCOCO1-222ENST00000553154 TIMELESSQ9UNS1 1208 aa14.56□□□□□ -0.08
CALCOCO1-222ENST00000553154 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
CALCOCO1-222ENST00000553154 SRCAPQ6ZRS2 3230 aa14.54□□□□□ -0.08
CALCOCO1-222ENST00000553154 ROCK2O75116 1388 aaKnown RBP14.54□□□□□ -0.08
CALCOCO1-222ENST00000553154 TULP4Q9NRJ4 1543 aa14.53□□□□□ -0.08
CALCOCO1-222ENST00000553154 ATP7BP35670 1465 aa14.52□□□□□ -0.08
CALCOCO1-222ENST00000553154 PRR36Q9H6K5 1346 aa14.52□□□□□ -0.08
CALCOCO1-222ENST00000553154 SBNO2Q9Y2G9 1366 aa14.51□□□□□ -0.09
CALCOCO1-222ENST00000553154 ORAI2Q96SN7 254 aa14.51□□□□□ -0.09
CALCOCO1-222ENST00000553154 PHLPP1O60346 1717 aa14.51□□□□□ -0.09
CALCOCO1-222ENST00000553154 PXDNQ92626 1479 aa14.5□□□□□ -0.09
CALCOCO1-222ENST00000553154 QRICH2Q9H0J4 1663 aa14.5□□□□□ -0.09
CALCOCO1-222ENST00000553154 SAFB2Q14151 953 aaKnown RBP eCLIP14.5□□□□□ -0.09
CALCOCO1-222ENST00000553154 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
CALCOCO1-222ENST00000553154 POGKQ9P215 609 aa14.5□□□□□ -0.09
CALCOCO1-222ENST00000553154 KIF1AQ12756 1690 aa14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 SOS2Q07890 1332 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 WASLO00401 505 aaPredicted RBP14.49□□□□□ -0.09
CALCOCO1-222ENST00000553154 RGS17Q9UGC6 210 aaPredicted RBP14.48□□□□□ -0.09
CALCOCO1-222ENST00000553154 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
CALCOCO1-222ENST00000553154 HIRIP3Q9BW71 556 aaPredicted RBP14.47□□□□□ -0.09
CALCOCO1-222ENST00000553154 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
CALCOCO1-222ENST00000553154 DDX17Q92841 729 aaKnown RBP14.46□□□□□ -0.09
CALCOCO1-222ENST00000553154 JCADQ9P266 1359 aa14.45□□□□□ -0.1
CALCOCO1-222ENST00000553154 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
CALCOCO1-222ENST00000553154 NUTM2FA1L443 756 aa14.44□□□□□ -0.1
CALCOCO1-222ENST00000553154 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
CALCOCO1-222ENST00000553154 PNPLA6Q8IY17 1366 aa14.44□□□□□ -0.1
CALCOCO1-222ENST00000553154 ESCO1Q5FWF5 840 aa14.43□□□□□ -0.1
CALCOCO1-222ENST00000553154 TESK2Q96S53 571 aa14.43□□□□□ -0.1
CALCOCO1-222ENST00000553154 LRP6O75581 1613 aa14.43□□□□□ -0.1
CALCOCO1-222ENST00000553154 COL22A1Q8NFW1 1626 aaPredicted RBP14.43□□□□□ -0.1
CALCOCO1-222ENST00000553154 NPHP3Q7Z494 1330 aa14.42□□□□□ -0.1
CALCOCO1-222ENST00000553154 CDK19Q9BWU1 502 aa14.42□□□□□ -0.1
CALCOCO1-222ENST00000553154 PHF8Q9UPP1 1060 aa14.42□□□□□ -0.1
CALCOCO1-222ENST00000553154 TRPM3Q9HCF6 1732 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO1-222ENST00000553154 POLR3AO14802 1390 aaPredicted RBP14.41□□□□□ -0.1
CALCOCO1-222ENST00000553154 ITSN1Q15811 1721 aa14.41□□□□□ -0.1
CALCOCO1-222ENST00000553154 USP47Q96K76 1375 aa14.4□□□□□ -0.1
CALCOCO1-222ENST00000553154 FOXO3O43524 673 aa14.4□□□□□ -0.1
CALCOCO1-222ENST00000553154 NUDT16Q96DE0 195 aaKnown RBP14.4□□□□□ -0.1
CALCOCO1-222ENST00000553154 SPATA31A6Q5VVP1 1343 aa14.39□□□□□ -0.11
CALCOCO1-222ENST00000553154 SBNO1A3KN83 1393 aa14.38□□□□□ -0.11
CALCOCO1-222ENST00000553154 PLEKHG3A1L390 1219 aa14.38□□□□□ -0.11
CALCOCO1-222ENST00000553154 LRRC59Q96AG4 307 aaKnown RBP14.37□□□□□ -0.11
CALCOCO1-222ENST00000553154 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
CALCOCO1-222ENST00000553154 TNS3Q68CZ2 1445 aa14.37□□□□□ -0.11
CALCOCO1-222ENST00000553154 SPATA31A3Q5VYP0 1347 aa14.37□□□□□ -0.11
CALCOCO1-222ENST00000553154 EVC2Q86UK5 1308 aa14.37□□□□□ -0.11
CALCOCO1-222ENST00000553154 ALS2Q96Q42 1657 aa14.36□□□□□ -0.11
CALCOCO1-222ENST00000553154 SSH2Q76I76 1423 aa14.36□□□□□ -0.11
CALCOCO1-222ENST00000553154 ST20-MTHFSA0A0A6YYL1 179 aa14.36□□□□□ -0.11
CALCOCO1-222ENST00000553154 CABP2Q9NPB3 220 aa14.36□□□□□ -0.11
CALCOCO1-222ENST00000553154 PPIP5K1Q6PFW1 1433 aa14.35□□□□□ -0.11
CALCOCO1-222ENST00000553154 XPCQ01831 940 aaPredicted RBP14.35□□□□□ -0.11
CALCOCO1-222ENST00000553154 POTEAQ6S8J7 498 aa14.35□□□□□ -0.11
CALCOCO1-222ENST00000553154 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
CALCOCO1-222ENST00000553154 CD163L1Q9NR16 1453 aa14.35□□□□□ -0.11
CALCOCO1-222ENST00000553154 CPSF1Q10570 1443 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-222ENST00000553154 KRT28Q7Z3Y7 464 aa14.34□□□□□ -0.11
CALCOCO1-222ENST00000553154 PUS7Q96PZ0 661 aaKnown RBP14.34□□□□□ -0.11
CALCOCO1-222ENST00000553154 ATAD2Q6PL18 1390 aa14.34□□□□□ -0.11
CALCOCO1-222ENST00000553154 CRYBG1Q9Y4K1 1723 aa14.33□□□□□ -0.12
CALCOCO1-222ENST00000553154 SRPK2P78362 688 aaKnown RBP14.33□□□□□ -0.12
CALCOCO1-222ENST00000553154 NRKQ7Z2Y5 1582 aa14.33□□□□□ -0.12
CALCOCO1-222ENST00000553154 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
CALCOCO1-222ENST00000553154 ACEP12821 1306 aa14.32□□□□□ -0.12
CALCOCO1-222ENST00000553154 USP6P35125 1406 aa14.32□□□□□ -0.12
CALCOCO1-222ENST00000553154 CABP1Q9NZU7 370 aa14.3□□□□□ -0.12
CALCOCO1-222ENST00000553154 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
CALCOCO1-222ENST00000553154 BRD4O60885 1362 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-222ENST00000553154 AKAP12Q02952 1782 aa14.29□□□□□ -0.12
CALCOCO1-222ENST00000553154 PSME1Q06323 249 aa14.28□□□□□ -0.12
CALCOCO1-222ENST00000553154 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
CALCOCO1-222ENST00000553154 NGDNQ8NEJ9 315 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms