RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-218ENST00000553099 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-218ENST00000553099 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
RAB3IP-218ENST00000553099 SETD1AO15047 1707 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-218ENST00000553099 UBR1Q8IWV7 1749 aa12.13□□□□□ -0.47
RAB3IP-218ENST00000553099 FER1L4A9Z1Z3 1794 aa12.12□□□□□ -0.47
RAB3IP-218ENST00000553099 MORC1Q86VD1 984 aa12.12□□□□□ -0.47
RAB3IP-218ENST00000553099 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.12□□□□□ -0.47
RAB3IP-218ENST00000553099 BLMP54132 1417 aaPredicted RBP12.12□□□□□ -0.47
RAB3IP-218ENST00000553099 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
RAB3IP-218ENST00000553099 ANKRD36BQ8N2N9 1353 aa12.11□□□□□ -0.47
RAB3IP-218ENST00000553099 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
RAB3IP-218ENST00000553099 WAPLQ7Z5K2 1190 aa12.11□□□□□ -0.47
RAB3IP-218ENST00000553099 C3P01024 1663 aa12.1□□□□□ -0.47
RAB3IP-218ENST00000553099 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-218ENST00000553099 PUS7Q96PZ0 661 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-218ENST00000553099 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
RAB3IP-218ENST00000553099 ATAD2Q6PL18 1390 aa12.09□□□□□ -0.47
RAB3IP-218ENST00000553099 PLEKHH1Q9ULM0 1364 aa12.09□□□□□ -0.47
RAB3IP-218ENST00000553099 USP32Q8NFA0 1604 aa12.09□□□□□ -0.47
RAB3IP-218ENST00000553099 METP08581 1390 aa12.08□□□□□ -0.48
RAB3IP-218ENST00000553099 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
RAB3IP-218ENST00000553099 CDK19Q9BWU1 502 aa12.08□□□□□ -0.48
RAB3IP-218ENST00000553099 CCDC146Q8IYE0 955 aa12.08□□□□□ -0.48
RAB3IP-218ENST00000553099 CDCA7LQ96GN5 454 aa12.07□□□□□ -0.48
RAB3IP-218ENST00000553099 INSRP06213 1382 aa12.07□□□□□ -0.48
RAB3IP-218ENST00000553099 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
RAB3IP-218ENST00000553099 DLC1Q96QB1 1528 aa12.07□□□□□ -0.48
RAB3IP-218ENST00000553099 NINLQ9Y2I6 1382 aa12.07□□□□□ -0.48
RAB3IP-218ENST00000553099 NLRP1Q9C000 1473 aa12.06□□□□□ -0.48
RAB3IP-218ENST00000553099 TERF2IPQ9NYB0 399 aa12.06□□□□□ -0.48
RAB3IP-218ENST00000553099 PDE3BQ13370 1112 aa12.05□□□□□ -0.48
RAB3IP-218ENST00000553099 ABCC11Q96J66 1382 aa12.05□□□□□ -0.48
RAB3IP-218ENST00000553099 CABP1Q9NZU7 370 aa12.05□□□□□ -0.48
RAB3IP-218ENST00000553099 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
RAB3IP-218ENST00000553099 LTKP29376 864 aa12.04□□□□□ -0.48
RAB3IP-218ENST00000553099 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
RAB3IP-218ENST00000553099 POLR3AO14802 1390 aaPredicted RBP12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 NSD2O96028 1365 aa12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 KNDC1Q76NI1 1749 aa12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 MTHFSP49914 203 aa12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
RAB3IP-218ENST00000553099 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 SLC26A8Q96RN1 970 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 PPP4R2Q9NY27 417 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 SHPRHQ149N8 1683 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 APAF1O14727 1248 aa12.02□□□□□ -0.49
RAB3IP-218ENST00000553099 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 ADAMTS13Q76LX8 1427 aa12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 KIF20BQ96Q89 1820 aa12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 ANKRD26Q9UPS8 1709 aa12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 RIMS1Q86UR5 1692 aaKnown RBP12.01□□□□□ -0.49
RAB3IP-218ENST00000553099 PLEKHG1Q9ULL1 1385 aa12□□□□□ -0.49
RAB3IP-218ENST00000553099 CPS1P31327 1500 aa12□□□□□ -0.49
RAB3IP-218ENST00000553099 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
RAB3IP-218ENST00000553099 B4GALNT3Q6L9W6 998 aa12□□□□□ -0.49
RAB3IP-218ENST00000553099 FYB1O15117 783 aa11.99□□□□□ -0.49
RAB3IP-218ENST00000553099 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
RAB3IP-218ENST00000553099 TECPR2O15040 1411 aa11.99□□□□□ -0.49
RAB3IP-218ENST00000553099 PPIP5K1Q6PFW1 1433 aa11.99□□□□□ -0.49
RAB3IP-218ENST00000553099 ROBO2Q9HCK4 1378 aa11.99□□□□□ -0.49
RAB3IP-218ENST00000553099 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 NCKAP5LQ9HCH0 1330 aa11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 NEUROD2Q15784 382 aa11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
RAB3IP-218ENST00000553099 NUTM2FA1L443 756 aa11.97□□□□□ -0.49
RAB3IP-218ENST00000553099 ATP7BP35670 1465 aa11.97□□□□□ -0.49
RAB3IP-218ENST00000553099 SLIT1O75093 1534 aa11.97□□□□□ -0.49
RAB3IP-218ENST00000553099 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
RAB3IP-218ENST00000553099 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.5
RAB3IP-218ENST00000553099 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.5
RAB3IP-218ENST00000553099 ZNF521Q96K83 1311 aa11.96□□□□□ -0.5
RAB3IP-218ENST00000553099 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.5
RAB3IP-218ENST00000553099 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 ITSN1Q15811 1721 aa11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 SIRT1Q96EB6 747 aa11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 CEP170BQ9Y4F5 1589 aaPredicted RBP11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
RAB3IP-218ENST00000553099 PPM1GO15355 546 aaPredicted RBP11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 CCDC61Q9Y6R9 512 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 MED14O60244 1454 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 PLIN1O60240 522 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 FBLN1P23142 703 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
RAB3IP-218ENST00000553099 MAP2P11137 1827 aaKnown RBP11.93□□□□□ -0.5
RAB3IP-218ENST00000553099 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
RAB3IP-218ENST00000553099 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
RAB3IP-218ENST00000553099 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
RAB3IP-218ENST00000553099 PRR36Q9H6K5 1346 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms