RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.86□□□□□ -0.19
PRKCH-203ENST00000552875 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
PRKCH-203ENST00000552875 SPON1Q9HCB6 807 aa13.85□□□□□ -0.19
PRKCH-203ENST00000552875 SLIT2O94813 1529 aa13.85□□□□□ -0.19
PRKCH-203ENST00000552875 GCC2Q8IWJ2 1684 aa13.83□□□□□ -0.2
PRKCH-203ENST00000552875 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
PRKCH-203ENST00000552875 NBPF8Q3BBV2 869 aa13.83□□□□□ -0.2
PRKCH-203ENST00000552875 NBPF14Q5TI25 921 aa13.83□□□□□ -0.2
PRKCH-203ENST00000552875 LRPPRCP42704 1394 aaKnown RBP13.83□□□□□ -0.2
PRKCH-203ENST00000552875 DISP2A7MBM2 1401 aa13.82□□□□□ -0.2
PRKCH-203ENST00000552875 XRN1Q8IZH2 1706 aaKnown RBP13.82□□□□□ -0.2
PRKCH-203ENST00000552875 EZH2Q15910 746 aaKnown RBP13.81□□□□□ -0.2
PRKCH-203ENST00000552875 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
PRKCH-203ENST00000552875 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
PRKCH-203ENST00000552875 ANKRD30AQ9BXX3 1397 aa13.8□□□□□ -0.2
PRKCH-203ENST00000552875 KCNQ2O43526 872 aa13.79□□□□□ -0.2
PRKCH-203ENST00000552875 ESCO1Q5FWF5 840 aa13.79□□□□□ -0.2
PRKCH-203ENST00000552875 MARF1Q9Y4F3 1742 aaKnown RBP13.78□□□□□ -0.2
PRKCH-203ENST00000552875 METP08581 1390 aa13.78□□□□□ -0.2
PRKCH-203ENST00000552875 RGPD1P0DJD0 1748 aa13.77□□□□□ -0.21
PRKCH-203ENST00000552875 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
PRKCH-203ENST00000552875 ABCC5O15440 1437 aa13.76□□□□□ -0.21
PRKCH-203ENST00000552875 FOXO3O43524 673 aa13.76□□□□□ -0.21
PRKCH-203ENST00000552875 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
PRKCH-203ENST00000552875 CAMKK2Q96RR4 588 aa13.76□□□□□ -0.21
PRKCH-203ENST00000552875 NALCNQ8IZF0 1738 aa13.76□□□□□ -0.21
PRKCH-203ENST00000552875 ADGRB2O60241 1585 aa13.75□□□□□ -0.21
PRKCH-203ENST00000552875 ADGRL2O95490 1459 aa13.75□□□□□ -0.21
PRKCH-203ENST00000552875 FAM98CQ17RN3 349 aaKnown RBP13.75□□□□□ -0.21
PRKCH-203ENST00000552875 PTPN23Q9H3S7 1636 aa13.75□□□□□ -0.21
PRKCH-203ENST00000552875 PXDNQ92626 1479 aa13.74□□□□□ -0.21
PRKCH-203ENST00000552875 XPCQ01831 940 aaPredicted RBP13.74□□□□□ -0.21
PRKCH-203ENST00000552875 APBA3O96018 575 aa13.73□□□□□ -0.21
PRKCH-203ENST00000552875 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
PRKCH-203ENST00000552875 DAPK1P53355 1430 aa13.72□□□□□ -0.21
PRKCH-203ENST00000552875 SPATA31A3Q5VYP0 1347 aa13.71□□□□□ -0.21
PRKCH-203ENST00000552875 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.21
PRKCH-203ENST00000552875 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.21
PRKCH-203ENST00000552875 FAM182BQ5T319 152 aa13.7□□□□□ -0.22
PRKCH-203ENST00000552875 USP32Q8NFA0 1604 aa13.7□□□□□ -0.22
PRKCH-203ENST00000552875 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
PRKCH-203ENST00000552875 TRIM37O94972 964 aa13.69□□□□□ -0.22
PRKCH-203ENST00000552875 NRXN3Q9Y4C0 1643 aa13.68□□□□□ -0.22
PRKCH-203ENST00000552875 HFM1A2PYH4 1435 aa13.68□□□□□ -0.22
PRKCH-203ENST00000552875 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
PRKCH-203ENST00000552875 NWD2Q9ULI1 1742 aa13.67□□□□□ -0.22
PRKCH-203ENST00000552875 PSME1Q06323 249 aa13.66□□□□□ -0.22
PRKCH-203ENST00000552875 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
PRKCH-203ENST00000552875 CEP350Q5VT06 3117 aa13.66□□□□□ -0.22
PRKCH-203ENST00000552875 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.22
PRKCH-203ENST00000552875 IQGAP3Q86VI3 1631 aa13.64□□□□□ -0.23
PRKCH-203ENST00000552875 CAMTA1Q9Y6Y1 1673 aa13.64□□□□□ -0.23
PRKCH-203ENST00000552875 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
PRKCH-203ENST00000552875 KRT28Q7Z3Y7 464 aa13.63□□□□□ -0.23
PRKCH-203ENST00000552875 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
PRKCH-203ENST00000552875 TNS1Q9HBL0 1735 aaKnown RBP13.63□□□□□ -0.23
PRKCH-203ENST00000552875 UTRNP46939 3433 aa13.63□□□□□ -0.23
PRKCH-203ENST00000552875 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
PRKCH-203ENST00000552875 CABLES1Q8TDN4 633 aa13.62□□□□□ -0.23
PRKCH-203ENST00000552875 ARHGEF10O15013 1369 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 PLCH1Q4KWH8 1693 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 LMOD2Q6P5Q4 547 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 TNS3Q68CZ2 1445 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 CDC42BPGQ6DT37 1551 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 SPATA31A5Q5VU36 1347 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 SPATA31A7Q8IWB4 1347 aa13.61□□□□□ -0.23
PRKCH-203ENST00000552875 SYT17Q9BSW7 474 aa13.6□□□□□ -0.23
PRKCH-203ENST00000552875 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
PRKCH-203ENST00000552875 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
PRKCH-203ENST00000552875 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
PRKCH-203ENST00000552875 KANK4Q5T7N3 995 aaPredicted RBP13.58□□□□□ -0.24
PRKCH-203ENST00000552875 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
PRKCH-203ENST00000552875 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
PRKCH-203ENST00000552875 RREB1Q92766 1687 aa13.56□□□□□ -0.24
PRKCH-203ENST00000552875 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
PRKCH-203ENST00000552875 NRKQ7Z2Y5 1582 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 ZBTB7AO95365 584 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 GPR162Q16538 588 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 E9PCH4 1651 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 NUP188Q5SRE5 1749 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 SBNO1A3KN83 1393 aa13.55□□□□□ -0.24
PRKCH-203ENST00000552875 RRBP1Q9P2E9 1410 aaKnown RBP13.55□□□□□ -0.24
PRKCH-203ENST00000552875 HSPA6P17066 643 aa13.54□□□□□ -0.24
PRKCH-203ENST00000552875 CHD4Q14839 1912 aa13.54□□□□□ -0.24
PRKCH-203ENST00000552875 NAIPQ13075 1403 aa13.54□□□□□ -0.24
PRKCH-203ENST00000552875 KIF1AQ12756 1690 aa13.53□□□□□ -0.24
PRKCH-203ENST00000552875 PTGER2P43116 358 aa13.53□□□□□ -0.24
PRKCH-203ENST00000552875 THSD7AQ9UPZ6 1657 aa13.53□□□□□ -0.24
PRKCH-203ENST00000552875 PHF8Q9UPP1 1060 aa13.52□□□□□ -0.25
PRKCH-203ENST00000552875 DLC1Q96QB1 1528 aa13.52□□□□□ -0.25
PRKCH-203ENST00000552875 SPATA31A1Q5TZJ5 1347 aa13.51□□□□□ -0.25
PRKCH-203ENST00000552875 ATF5Q9Y2D1 282 aaPredicted RBP13.51□□□□□ -0.25
PRKCH-203ENST00000552875 NRAPQ86VF7 1730 aa13.5□□□□□ -0.25
PRKCH-203ENST00000552875 NUP155O75694 1391 aa13.5□□□□□ -0.25
PRKCH-203ENST00000552875 BCL11BQ9C0K0 894 aaPredicted RBP13.5□□□□□ -0.25
PRKCH-203ENST00000552875 PLSCR1O15162 318 aa13.49□□□□□ -0.25
PRKCH-203ENST00000552875 MTFR1LQ9H019 292 aa13.49□□□□□ -0.25
PRKCH-203ENST00000552875 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
PRKCH-203ENST00000552875 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms