RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 KIF7Q2M1P5 1343 aa14.07□□□□□ -0.16
MMP19-209ENST00000552872 CENPJQ9HC77 1338 aaPredicted RBP14.07□□□□□ -0.16
MMP19-209ENST00000552872 UBE2Q2Q8WVN8 375 aa14.07□□□□□ -0.16
MMP19-209ENST00000552872 QRICH2Q9H0J4 1663 aa14.06□□□□□ -0.16
MMP19-209ENST00000552872 MED14O60244 1454 aa14.06□□□□□ -0.16
MMP19-209ENST00000552872 TBX22Q9Y458 520 aa14.05□□□□□ -0.16
MMP19-209ENST00000552872 LRPPRCP42704 1394 aaKnown RBP14.04□□□□□ -0.16
MMP19-209ENST00000552872 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
MMP19-209ENST00000552872 EIF3AQ14152 1382 aaKnown RBP14.03□□□□□ -0.16
MMP19-209ENST00000552872 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.17
MMP19-209ENST00000552872 STRCP1A6NGW2 1772 aa14.02□□□□□ -0.17
MMP19-209ENST00000552872 CCDC7Q96M83 1385 aa14.01□□□□□ -0.17
MMP19-209ENST00000552872 CHD2O14647 1828 aaKnown RBP14.01□□□□□ -0.17
MMP19-209ENST00000552872 ABCC11Q96J66 1382 aa14□□□□□ -0.17
MMP19-209ENST00000552872 TMF1P82094 1093 aa14□□□□□ -0.17
MMP19-209ENST00000552872 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.99□□□□□ -0.17
MMP19-209ENST00000552872 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
MMP19-209ENST00000552872 C14orf37Q86TY3 774 aa13.99□□□□□ -0.17
MMP19-209ENST00000552872 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
MMP19-209ENST00000552872 TULP4Q9NRJ4 1543 aa13.98□□□□□ -0.17
MMP19-209ENST00000552872 DIP2AQ14689 1571 aa13.97□□□□□ -0.17
MMP19-209ENST00000552872 XRN1Q8IZH2 1706 aaKnown RBP13.97□□□□□ -0.17
MMP19-209ENST00000552872 ILDR1Q86SU0 546 aaPredicted RBP13.97□□□□□ -0.17
MMP19-209ENST00000552872 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
MMP19-209ENST00000552872 PROSER2Q86WR7 435 aaPredicted RBP13.96□□□□□ -0.17
MMP19-209ENST00000552872 RBM19Q9Y4C8 960 aaKnown RBP13.96□□□□□ -0.17
MMP19-209ENST00000552872 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
MMP19-209ENST00000552872 CPS1P31327 1500 aa13.96□□□□□ -0.17
MMP19-209ENST00000552872 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
MMP19-209ENST00000552872 TECPR2O15040 1411 aa13.94□□□□□ -0.18
MMP19-209ENST00000552872 RGPD8O14715 1765 aaPredicted RBP13.93□□□□□ -0.18
MMP19-209ENST00000552872 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
MMP19-209ENST00000552872 NALCNQ8IZF0 1738 aa13.93□□□□□ -0.18
MMP19-209ENST00000552872 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
MMP19-209ENST00000552872 ANO8Q9HCE9 1232 aaPredicted RBP13.92□□□□□ -0.18
MMP19-209ENST00000552872 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
MMP19-209ENST00000552872 PANK3Q9H999 370 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 PRR36Q9H6K5 1346 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 MYOM1P52179 1685 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 FAM135BQ49AJ0 1406 aa13.91□□□□□ -0.18
MMP19-209ENST00000552872 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
MMP19-209ENST00000552872 PIK3R4Q99570 1358 aa13.9□□□□□ -0.18
MMP19-209ENST00000552872 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
MMP19-209ENST00000552872 NUDT16Q96DE0 195 aaKnown RBP13.88□□□□□ -0.19
MMP19-209ENST00000552872 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
MMP19-209ENST00000552872 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
MMP19-209ENST00000552872 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
MMP19-209ENST00000552872 NWD1Q149M9 1564 aa13.87□□□□□ -0.19
MMP19-209ENST00000552872 MSH5O43196 834 aa13.87□□□□□ -0.19
MMP19-209ENST00000552872 CC2D1BQ5T0F9 858 aaKnown RBP13.87□□□□□ -0.19
MMP19-209ENST00000552872 FKBP8Q14318 412 aa13.86□□□□□ -0.19
MMP19-209ENST00000552872 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
MMP19-209ENST00000552872 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
MMP19-209ENST00000552872 DDX17Q92841 729 aaKnown RBP13.86□□□□□ -0.19
MMP19-209ENST00000552872 SIRT1Q96EB6 747 aa13.86□□□□□ -0.19
MMP19-209ENST00000552872 CDCA8Q53HL2 280 aa13.85□□□□□ -0.19
MMP19-209ENST00000552872 DMRT2Q9Y5R5 561 aa13.85□□□□□ -0.19
MMP19-209ENST00000552872 USP32Q8NFA0 1604 aa13.85□□□□□ -0.19
MMP19-209ENST00000552872 ORAI2Q96SN7 254 aa13.85□□□□□ -0.19
MMP19-209ENST00000552872 PPIP5K1Q6PFW1 1433 aa13.84□□□□□ -0.19
MMP19-209ENST00000552872 LRRC7Q96NW7 1537 aa13.84□□□□□ -0.19
MMP19-209ENST00000552872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.84□□□□□ -0.19
MMP19-209ENST00000552872 ESCO1Q5FWF5 840 aa13.83□□□□□ -0.19
MMP19-209ENST00000552872 ATP7BP35670 1465 aa13.83□□□□□ -0.19
MMP19-209ENST00000552872 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
MMP19-209ENST00000552872 A0A1W2PP64 1363 aa13.82□□□□□ -0.2
MMP19-209ENST00000552872 NKTRP30414 1462 aaKnown RBP13.82□□□□□ -0.2
MMP19-209ENST00000552872 TNNT2P45379 298 aaPredicted RBP13.82□□□□□ -0.2
MMP19-209ENST00000552872 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
MMP19-209ENST00000552872 ATF3P18847 181 aa13.81□□□□□ -0.2
MMP19-209ENST00000552872 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
MMP19-209ENST00000552872 ADGRB2O60241 1585 aa13.81□□□□□ -0.2
MMP19-209ENST00000552872 CD163L1Q9NR16 1453 aa13.81□□□□□ -0.2
MMP19-209ENST00000552872 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
MMP19-209ENST00000552872 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
MMP19-209ENST00000552872 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
MMP19-209ENST00000552872 NSD3Q9BZ95 1437 aa13.8□□□□□ -0.2
MMP19-209ENST00000552872 ACEP12821 1306 aa13.8□□□□□ -0.2
MMP19-209ENST00000552872 ATAD2Q6PL18 1390 aa13.79□□□□□ -0.2
MMP19-209ENST00000552872 FOXO3O43524 673 aa13.79□□□□□ -0.2
MMP19-209ENST00000552872 FBLN1P23142 703 aa13.79□□□□□ -0.2
MMP19-209ENST00000552872 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
MMP19-209ENST00000552872 NGDNQ8NEJ9 315 aaKnown RBP13.79□□□□□ -0.2
MMP19-209ENST00000552872 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
MMP19-209ENST00000552872 NEFLP07196 543 aa13.78□□□□□ -0.2
MMP19-209ENST00000552872 MSH6P52701 1360 aa13.78□□□□□ -0.2
MMP19-209ENST00000552872 CCDC184Q52MB2 194 aa13.78□□□□□ -0.2
MMP19-209ENST00000552872 GGNBP2Q9H3C7 697 aa13.78□□□□□ -0.2
MMP19-209ENST00000552872 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.2
MMP19-209ENST00000552872 SENP3-EIF4A1A0A087X0R7 540 aa13.77□□□□□ -0.21
MMP19-209ENST00000552872 SOX12O15370 315 aa13.77□□□□□ -0.21
MMP19-209ENST00000552872 ANP32CO43423 234 aa13.77□□□□□ -0.21
MMP19-209ENST00000552872 PAK3O75914 559 aaPredicted RBP13.77□□□□□ -0.21
MMP19-209ENST00000552872 LTBP4Q8N2S1 1624 aa13.77□□□□□ -0.21
MMP19-209ENST00000552872 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
MMP19-209ENST00000552872 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
MMP19-209ENST00000552872 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
MMP19-209ENST00000552872 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms