RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 TCERG1O14776 1098 aaKnown RBP13.63□□□□□ -0.23
RFX4-210ENST00000552773 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.63□□□□□ -0.23
RFX4-210ENST00000552773 ZNF521Q96K83 1311 aa13.62□□□□□ -0.23
RFX4-210ENST00000552773 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
RFX4-210ENST00000552773 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
RFX4-210ENST00000552773 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
RFX4-210ENST00000552773 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
RFX4-210ENST00000552773 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
RFX4-210ENST00000552773 MS4A1P11836 297 aa13.61□□□□□ -0.23
RFX4-210ENST00000552773 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
RFX4-210ENST00000552773 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
RFX4-210ENST00000552773 AAMPQ13685 434 aa13.6□□□□□ -0.23
RFX4-210ENST00000552773 DUSP27Q5VZP5 1158 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 POGKQ9P215 609 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 NKTRP30414 1462 aaKnown RBP13.59□□□□□ -0.23
RFX4-210ENST00000552773 MED14O60244 1454 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
RFX4-210ENST00000552773 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.24
RFX4-210ENST00000552773 DLC1Q96QB1 1528 aa13.58□□□□□ -0.24
RFX4-210ENST00000552773 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
RFX4-210ENST00000552773 HDGFL2Q7Z4V5 671 aaPredicted RBP13.58□□□□□ -0.24
RFX4-210ENST00000552773 TRMT2AQ8IZ69 625 aaKnown RBP13.58□□□□□ -0.24
RFX4-210ENST00000552773 SLC12A5Q9H2X9 1139 aa13.58□□□□□ -0.24
RFX4-210ENST00000552773 ANP32AP39687 249 aaKnown RBP13.57□□□□□ -0.24
RFX4-210ENST00000552773 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
RFX4-210ENST00000552773 PLEKHH1Q9ULM0 1364 aa13.57□□□□□ -0.24
RFX4-210ENST00000552773 SRPK2P78362 688 aaKnown RBP13.56□□□□□ -0.24
RFX4-210ENST00000552773 WDR63Q8IWG1 891 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
RFX4-210ENST00000552773 APAF1O14727 1248 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 TULP4Q9NRJ4 1543 aa13.56□□□□□ -0.24
RFX4-210ENST00000552773 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
RFX4-210ENST00000552773 ALKQ9UM73 1620 aa13.54□□□□□ -0.24
RFX4-210ENST00000552773 PTPRMP28827 1452 aa13.53□□□□□ -0.24
RFX4-210ENST00000552773 CT47B1P0C2W7 299 aaPredicted RBP13.53□□□□□ -0.24
RFX4-210ENST00000552773 CENPQQ7L2Z9 268 aaPredicted RBP13.53□□□□□ -0.24
RFX4-210ENST00000552773 PDE3AQ14432 1141 aa13.53□□□□□ -0.24
RFX4-210ENST00000552773 MYH16Q9H6N6 1097 aa13.53□□□□□ -0.24
RFX4-210ENST00000552773 A2ML1A8K2U0 1454 aa13.51□□□□□ -0.25
RFX4-210ENST00000552773 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
RFX4-210ENST00000552773 NEFMP07197 916 aa13.51□□□□□ -0.25
RFX4-210ENST00000552773 MTHFSP49914 203 aa13.51□□□□□ -0.25
RFX4-210ENST00000552773 PRAM1Q96QH2 718 aa13.51□□□□□ -0.25
RFX4-210ENST00000552773 WWC1Q8IX03 1113 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 CCDC146Q8IYE0 955 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 STK26Q9P289 416 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 ATP7BP35670 1465 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 TSPOAP1O95153 1857 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 CRBNQ96SW2 442 aa13.5□□□□□ -0.25
RFX4-210ENST00000552773 ANKRD26Q9UPS8 1709 aa13.49□□□□□ -0.25
RFX4-210ENST00000552773 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
RFX4-210ENST00000552773 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
RFX4-210ENST00000552773 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
RFX4-210ENST00000552773 NUTM2DQ5VT03 806 aaPredicted RBP13.49□□□□□ -0.25
RFX4-210ENST00000552773 FBXO31Q5XUX0 539 aaPredicted RBP13.48□□□□□ -0.25
RFX4-210ENST00000552773 SHPRHQ149N8 1683 aa13.48□□□□□ -0.25
RFX4-210ENST00000552773 CANXP27824 592 aaKnown RBP13.47□□□□□ -0.25
RFX4-210ENST00000552773 FAM135BQ49AJ0 1406 aa13.47□□□□□ -0.25
RFX4-210ENST00000552773 MAPK8IP3Q9UPT6 1336 aa13.47□□□□□ -0.25
RFX4-210ENST00000552773 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
RFX4-210ENST00000552773 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
RFX4-210ENST00000552773 TCP11L2Q8N4U5 519 aa13.47□□□□□ -0.25
RFX4-210ENST00000552773 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
RFX4-210ENST00000552773 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
RFX4-210ENST00000552773 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
RFX4-210ENST00000552773 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
RFX4-210ENST00000552773 IL16Q14005 1332 aa13.46□□□□□ -0.26
RFX4-210ENST00000552773 MINK1Q8N4C8 1332 aaPredicted RBP13.46□□□□□ -0.26
RFX4-210ENST00000552773 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
RFX4-210ENST00000552773 PLIN1O60240 522 aa13.44□□□□□ -0.26
RFX4-210ENST00000552773 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
RFX4-210ENST00000552773 TNRQ92752 1358 aa13.44□□□□□ -0.26
RFX4-210ENST00000552773 SAFB2Q14151 953 aaKnown RBP eCLIP13.44□□□□□ -0.26
RFX4-210ENST00000552773 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
RFX4-210ENST00000552773 IPO9Q96P70 1041 aaKnown RBP13.44□□□□□ -0.26
RFX4-210ENST00000552773 ZNF692Q9BU19 519 aaPredicted RBP13.44□□□□□ -0.26
RFX4-210ENST00000552773 TECPR2O15040 1411 aa13.43□□□□□ -0.26
RFX4-210ENST00000552773 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
RFX4-210ENST00000552773 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
RFX4-210ENST00000552773 NLRP1Q9C000 1473 aa13.42□□□□□ -0.26
RFX4-210ENST00000552773 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
RFX4-210ENST00000552773 FYB1O15117 783 aa13.42□□□□□ -0.26
RFX4-210ENST00000552773 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
RFX4-210ENST00000552773 NOP58Q9Y2X3 529 aaKnown RBP13.42□□□□□ -0.26
RFX4-210ENST00000552773 EDC4Q6P2E9 1401 aaKnown RBP13.42□□□□□ -0.26
RFX4-210ENST00000552773 FCHSD2O94868 740 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 PDE4AP27815 886 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
RFX4-210ENST00000552773 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 KIF13AQ9H1H9 1805 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 PNPLA6Q8IY17 1366 aa13.41□□□□□ -0.26
RFX4-210ENST00000552773 WASLO00401 505 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms