RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 MAP2K5Q13163 448 aa11.19□□□□□ -0.62
CEP290-206ENST00000552770 CYP4X1Q8N118 509 aa11.19□□□□□ -0.62
CEP290-206ENST00000552770 MMP16P51512 607 aa11.18□□□□□ -0.62
CEP290-206ENST00000552770 MDM2Q00987 491 aaPredicted RBP11.18□□□□□ -0.62
CEP290-206ENST00000552770 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
CEP290-206ENST00000552770 GUCA2AQ02747 115 aa11.17□□□□□ -0.62
CEP290-206ENST00000552770 IRF6O14896 467 aa11.16□□□□□ -0.62
CEP290-206ENST00000552770 TRIM32Q13049 653 aa11.16□□□□□ -0.62
CEP290-206ENST00000552770 AXIN1O15169 862 aa11.15□□□□□ -0.62
CEP290-206ENST00000552770 KDM4AO75164 1064 aa11.15□□□□□ -0.62
CEP290-206ENST00000552770 SMPD1P17405 629 aa11.15□□□□□ -0.62
CEP290-206ENST00000552770 WNT7AO00755 349 aa11.14□□□□□ -0.63
CEP290-206ENST00000552770 ZBTB24O43167 697 aaPredicted RBP11.14□□□□□ -0.63
CEP290-206ENST00000552770 DXOO77932 396 aaKnown RBP11.14□□□□□ -0.63
CEP290-206ENST00000552770 GRIPAP1Q4V328 841 aa11.14□□□□□ -0.63
CEP290-206ENST00000552770 USB1Q9BQ65 265 aaKnown RBP11.14□□□□□ -0.63
CEP290-206ENST00000552770 Q3C1V9 767 aa11.13□□□□□ -0.63
CEP290-206ENST00000552770 TREML4Q6UXN2 200 aa11.13□□□□□ -0.63
CEP290-206ENST00000552770 CCDC102AQ96A19 550 aa11.13□□□□□ -0.63
CEP290-206ENST00000552770 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
CEP290-206ENST00000552770 TTC24A2A3L6 582 aaPredicted RBP11.12□□□□□ -0.63
CEP290-206ENST00000552770 J3QL48 77 aa11.12□□□□□ -0.63
CEP290-206ENST00000552770 HOXA2O43364 376 aa11.12□□□□□ -0.63
CEP290-206ENST00000552770 SMCPP49901 116 aaPredicted RBP11.12□□□□□ -0.63
CEP290-206ENST00000552770 SYMPKQ92797 1274 aaKnown RBP11.12□□□□□ -0.63
CEP290-206ENST00000552770 SKOR1P84550 965 aa11.1□□□□□ -0.63
CEP290-206ENST00000552770 CTC1Q2NKJ3 1217 aa11.09□□□□□ -0.63
CEP290-206ENST00000552770 SNIP1Q8TAD8 396 aaKnown RBP11.09□□□□□ -0.63
CEP290-206ENST00000552770 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
CEP290-206ENST00000552770 CCDC24Q8N4L8 307 aa11.08□□□□□ -0.64
CEP290-206ENST00000552770 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
CEP290-206ENST00000552770 MINK1Q8N4C8 1332 aaPredicted RBP11.08□□□□□ -0.64
CEP290-206ENST00000552770 LCE2CQ5TA81 110 aa11.07□□□□□ -0.64
CEP290-206ENST00000552770 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
CEP290-206ENST00000552770 HPS1Q92902 700 aa11.06□□□□□ -0.64
CEP290-206ENST00000552770 SNRPBP14678 240 aaKnown RBP11.05□□□□□ -0.64
CEP290-206ENST00000552770 USP46P62068 366 aa11.05□□□□□ -0.64
CEP290-206ENST00000552770 ATP13A2Q9NQ11 1180 aa11.04□□□□□ -0.64
CEP290-206ENST00000552770 NFX1Q12986 1120 aaKnown RBP11.03□□□□□ -0.64
CEP290-206ENST00000552770 RC3H1Q5TC82 1133 aaKnown RBP11.03□□□□□ -0.64
CEP290-206ENST00000552770 PTCRAQ6ISU1 281 aaPredicted RBP11.03□□□□□ -0.64
CEP290-206ENST00000552770 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
CEP290-206ENST00000552770 JUNDP17535 347 aa11.02□□□□□ -0.65
CEP290-206ENST00000552770 PCDHGC3Q9UN70 934 aa11.02□□□□□ -0.65
CEP290-206ENST00000552770 WFS1O76024 890 aa11□□□□□ -0.65
CEP290-206ENST00000552770 BCANQ96GW7 911 aa11□□□□□ -0.65
CEP290-206ENST00000552770 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
CEP290-206ENST00000552770 CLCN1P35523 988 aa10.98□□□□□ -0.65
CEP290-206ENST00000552770 WNT7BP56706 349 aa10.97□□□□□ -0.65
CEP290-206ENST00000552770 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
CEP290-206ENST00000552770 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
CEP290-206ENST00000552770 TRIM47Q96LD4 638 aa10.96□□□□□ -0.65
CEP290-206ENST00000552770 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
CEP290-206ENST00000552770 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
CEP290-206ENST00000552770 SIAH2O43255 324 aa10.94□□□□□ -0.66
CEP290-206ENST00000552770 ALDH1A1P00352 501 aa10.94□□□□□ -0.66
CEP290-206ENST00000552770 FDX1P10109 184 aa10.94□□□□□ -0.66
CEP290-206ENST00000552770 NDUFV2P19404 249 aa10.94□□□□□ -0.66
CEP290-206ENST00000552770 SPIRE2Q8WWL2 714 aa10.92□□□□□ -0.66
CEP290-206ENST00000552770 C6orf229H3BNL8 230 aa10.91□□□□□ -0.66
CEP290-206ENST00000552770 BMP1P13497 986 aa10.91□□□□□ -0.66
CEP290-206ENST00000552770 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
CEP290-206ENST00000552770 MOXD2PA6NHM9 499 aa10.9□□□□□ -0.66
CEP290-206ENST00000552770 SH3BP2P78314 561 aa10.9□□□□□ -0.66
CEP290-206ENST00000552770 TERTO14746 1132 aaKnown RBP10.89□□□□□ -0.67
CEP290-206ENST00000552770 TRIM46Q7Z4K8 759 aa10.89□□□□□ -0.67
CEP290-206ENST00000552770 WIPF1O43516 503 aa10.88□□□□□ -0.67
CEP290-206ENST00000552770 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
CEP290-206ENST00000552770 KRI1Q8N9T8 703 aaKnown RBP10.88□□□□□ -0.67
CEP290-206ENST00000552770 EHBP1Q8NDI1 1231 aa10.88□□□□□ -0.67
CEP290-206ENST00000552770 CCNYL3P0C7X3 344 aa10.87□□□□□ -0.67
CEP290-206ENST00000552770 MS4A1P11836 297 aa10.87□□□□□ -0.67
CEP290-206ENST00000552770 SENP2Q9HC62 589 aa10.87□□□□□ -0.67
CEP290-206ENST00000552770 TLL2Q9Y6L7 1015 aa10.86□□□□□ -0.67
CEP290-206ENST00000552770 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
CEP290-206ENST00000552770 PTPRNQ16849 979 aa10.84□□□□□ -0.67
CEP290-206ENST00000552770 GIGYF2Q6Y7W6 1299 aaKnown RBP10.84□□□□□ -0.67
CEP290-206ENST00000552770 BARGINQ6ZT62 677 aa10.84□□□□□ -0.67
CEP290-206ENST00000552770 PRR7Q8TB68 274 aa10.84□□□□□ -0.67
CEP290-206ENST00000552770 BAP1Q92560 729 aa10.84□□□□□ -0.67
CEP290-206ENST00000552770 ZMYND10O75800 440 aa10.83□□□□□ -0.68
CEP290-206ENST00000552770 TTLL12Q14166 644 aaPredicted RBP10.83□□□□□ -0.68
CEP290-206ENST00000552770 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
CEP290-206ENST00000552770 AMHR2Q16671 573 aa10.82□□□□□ -0.68
CEP290-206ENST00000552770 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
CEP290-206ENST00000552770 CAPN5O15484 640 aaPredicted RBP10.81□□□□□ -0.68
CEP290-206ENST00000552770 WASF2Q9Y6W5 498 aa10.81□□□□□ -0.68
CEP290-206ENST00000552770 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
CEP290-206ENST00000552770 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
CEP290-206ENST00000552770 MTMR2Q13614 643 aa10.79□□□□□ -0.68
CEP290-206ENST00000552770 ZNF511Q8NB15 262 aa10.79□□□□□ -0.68
CEP290-206ENST00000552770 BEGAINQ9BUH8 593 aa10.79□□□□□ -0.68
CEP290-206ENST00000552770 PCDHB15Q9Y5E8 787 aa10.79□□□□□ -0.68
CEP290-206ENST00000552770 VEGFBP49765 207 aa10.78□□□□□ -0.68
CEP290-206ENST00000552770 CFAP99D6REC4 459 aa10.77□□□□□ -0.69
CEP290-206ENST00000552770 PARP9Q8IXQ6 854 aa10.77□□□□□ -0.69
CEP290-206ENST00000552770 TBC1D2Q9BYX2 928 aa10.77□□□□□ -0.69
CEP290-206ENST00000552770 STK17AQ9UEE5 414 aa10.77□□□□□ -0.69
CEP290-206ENST00000552770 RSBN1LQ6PCB5 846 aaPredicted RBP10.76□□□□□ -0.69
CEP290-206ENST00000552770 INSM1Q01101 510 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms