RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 CLTCL1P53675 1640 aa22.68■■□□□ 1.22
LINC02396-204ENST00000552628 NPHP3Q7Z494 1330 aa22.68■■□□□ 1.22
LINC02396-204ENST00000552628 FOXO3O43524 673 aa22.68■■□□□ 1.22
LINC02396-204ENST00000552628 CCDC125Q86Z20 511 aa22.68■■□□□ 1.22
LINC02396-204ENST00000552628 KIF1BO60333 1816 aa22.66■■□□□ 1.22
LINC02396-204ENST00000552628 RPGRIP1LQ68CZ1 1315 aa22.66■■□□□ 1.22
LINC02396-204ENST00000552628 STK26Q9P289 416 aa22.66■■□□□ 1.22
LINC02396-204ENST00000552628 GJD4Q96KN9 370 aaPredicted RBP22.65■■□□□ 1.22
LINC02396-204ENST00000552628 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
LINC02396-204ENST00000552628 ATRNO75882 1429 aa22.64■■□□□ 1.21
LINC02396-204ENST00000552628 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
LINC02396-204ENST00000552628 HAP1P54257 671 aaPredicted RBP22.62■■□□□ 1.21
LINC02396-204ENST00000552628 LRPPRCP42704 1394 aaKnown RBP22.62■■□□□ 1.21
LINC02396-204ENST00000552628 SF3B2Q13435 895 aaKnown RBP22.59■■□□□ 1.21
LINC02396-204ENST00000552628 RGL3Q3MIN7 710 aa22.59■■□□□ 1.21
LINC02396-204ENST00000552628 WAPLQ7Z5K2 1190 aa22.59■■□□□ 1.21
LINC02396-204ENST00000552628 UNC5CLQ8IV45 518 aa22.57■■□□□ 1.2
LINC02396-204ENST00000552628 BCL9LQ86UU0 1499 aa22.57■■□□□ 1.2
LINC02396-204ENST00000552628 LAMC1P11047 1609 aa22.57■■□□□ 1.2
LINC02396-204ENST00000552628 CCDC9Q9Y3X0 531 aaKnown RBP22.56■■□□□ 1.2
LINC02396-204ENST00000552628 RAB3GAP2Q9H2M9 1393 aa22.54■■□□□ 1.2
LINC02396-204ENST00000552628 MYOM2P54296 1465 aa22.54■■□□□ 1.2
LINC02396-204ENST00000552628 TMEM132EQ6IEE7 984 aa22.53■■□□□ 1.2
LINC02396-204ENST00000552628 LMOD2Q6P5Q4 547 aa22.53■■□□□ 1.2
LINC02396-204ENST00000552628 KRT28Q7Z3Y7 464 aa22.53■■□□□ 1.2
LINC02396-204ENST00000552628 COL22A1Q8NFW1 1626 aaPredicted RBP22.53■■□□□ 1.2
LINC02396-204ENST00000552628 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
LINC02396-204ENST00000552628 HRCP23327 699 aa22.51■■□□□ 1.19
LINC02396-204ENST00000552628 DEFB132Q7Z7B7 95 aa22.51■■□□□ 1.19
LINC02396-204ENST00000552628 PXDNQ92626 1479 aa22.5■■□□□ 1.19
LINC02396-204ENST00000552628 A0A0G2JS52 829 aa22.5■■□□□ 1.19
LINC02396-204ENST00000552628 MYT1Q01538 1121 aa22.5■■□□□ 1.19
LINC02396-204ENST00000552628 MPHOSPH9Q99550 1183 aa22.49■■□□□ 1.19
LINC02396-204ENST00000552628 PSME1Q06323 249 aa22.48■■□□□ 1.19
LINC02396-204ENST00000552628 SEPT12Q8IYM1 358 aa22.48■■□□□ 1.19
LINC02396-204ENST00000552628 SPATA31A3Q5VYP0 1347 aa22.48■■□□□ 1.19
LINC02396-204ENST00000552628 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
LINC02396-204ENST00000552628 CABLES1Q8TDN4 633 aa22.47■■□□□ 1.19
LINC02396-204ENST00000552628 RALGAPBQ86X10 1494 aa22.47■■□□□ 1.19
LINC02396-204ENST00000552628 CDC42BPGQ6DT37 1551 aa22.46■■□□□ 1.19
LINC02396-204ENST00000552628 PRAG1Q86YV5 1406 aa22.46■■□□□ 1.19
LINC02396-204ENST00000552628 MARF1Q9Y4F3 1742 aaKnown RBP22.45■■□□□ 1.18
LINC02396-204ENST00000552628 PPLO60437 1756 aa22.45■■□□□ 1.18
LINC02396-204ENST00000552628 PLEKHH1Q9ULM0 1364 aa22.44■■□□□ 1.18
LINC02396-204ENST00000552628 CCDC144AA2RUR9 1427 aa22.43■■□□□ 1.18
LINC02396-204ENST00000552628 PHF8Q9UPP1 1060 aa22.43■■□□□ 1.18
LINC02396-204ENST00000552628 VPS72Q15906 364 aa22.42■■□□□ 1.18
LINC02396-204ENST00000552628 KRT27Q7Z3Y8 459 aa22.42■■□□□ 1.18
LINC02396-204ENST00000552628 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
LINC02396-204ENST00000552628 SAFB2Q14151 953 aaKnown RBP eCLIP22.41■■□□□ 1.18
LINC02396-204ENST00000552628 SLIT2O94813 1529 aa22.4■■□□□ 1.18
LINC02396-204ENST00000552628 ANKRD30BQ9BXX2 1392 aa22.39■■□□□ 1.18
LINC02396-204ENST00000552628 SRCAPQ6ZRS2 3230 aa22.38■■□□□ 1.17
LINC02396-204ENST00000552628 PSDA5PKW4 1024 aaPredicted RBP22.38■■□□□ 1.17
LINC02396-204ENST00000552628 SPATA31E1Q6ZUB1 1445 aa22.38■■□□□ 1.17
LINC02396-204ENST00000552628 GLI3P10071 1580 aa22.38■■□□□ 1.17
LINC02396-204ENST00000552628 BAG6P46379 1132 aa22.37■■□□□ 1.17
LINC02396-204ENST00000552628 PMFBP1Q8TBY8 1022 aa22.36■■□□□ 1.17
LINC02396-204ENST00000552628 POGKQ9P215 609 aa22.36■■□□□ 1.17
LINC02396-204ENST00000552628 TECPR2O15040 1411 aa22.36■■□□□ 1.17
LINC02396-204ENST00000552628 IFT172Q9UG01 1749 aa22.35■■□□□ 1.17
LINC02396-204ENST00000552628 YTHDC2Q9H6S0 1430 aaKnown RBP22.35■■□□□ 1.17
LINC02396-204ENST00000552628 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
LINC02396-204ENST00000552628 TNS3Q68CZ2 1445 aa22.34■■□□□ 1.17
LINC02396-204ENST00000552628 FAM83GA6ND36 823 aa22.34■■□□□ 1.17
LINC02396-204ENST00000552628 ONECUT3O60422 494 aaPredicted RBP22.33■■□□□ 1.17
LINC02396-204ENST00000552628 FAM98CQ17RN3 349 aaKnown RBP22.33■■□□□ 1.17
LINC02396-204ENST00000552628 SIRT1Q96EB6 747 aa22.33■■□□□ 1.17
LINC02396-204ENST00000552628 DHX57Q6P158 1386 aaKnown RBP22.33■■□□□ 1.17
LINC02396-204ENST00000552628 USP32Q8NFA0 1604 aa22.32■■□□□ 1.16
LINC02396-204ENST00000552628 BRWD3Q6RI45 1802 aa22.32■■□□□ 1.16
LINC02396-204ENST00000552628 CFAP70Q5T0N1 1121 aa22.32■■□□□ 1.16
LINC02396-204ENST00000552628 PRAM1Q96QH2 718 aa22.32■■□□□ 1.16
LINC02396-204ENST00000552628 KIF1AQ12756 1690 aa22.32■■□□□ 1.16
LINC02396-204ENST00000552628 FMN2Q9NZ56 1722 aa22.31■■□□□ 1.16
LINC02396-204ENST00000552628 EP400Q96L91 3159 aa22.31■■□□□ 1.16
LINC02396-204ENST00000552628 C14orf93Q9H972 538 aaKnown RBP22.31■■□□□ 1.16
LINC02396-204ENST00000552628 BTG4Q9NY30 223 aa22.31■■□□□ 1.16
LINC02396-204ENST00000552628 ARHGEF10O15013 1369 aa22.3■■□□□ 1.16
LINC02396-204ENST00000552628 SBNO1A3KN83 1393 aa22.28■■□□□ 1.16
LINC02396-204ENST00000552628 EN1Q05925 392 aaPredicted RBP22.28■■□□□ 1.16
LINC02396-204ENST00000552628 PIK3C2GO75747 1445 aa22.28■■□□□ 1.16
LINC02396-204ENST00000552628 FAM182BQ5T319 152 aa22.27■■□□□ 1.16
LINC02396-204ENST00000552628 PAK3O75914 559 aaPredicted RBP22.26■■□□□ 1.15
LINC02396-204ENST00000552628 RGPD8O14715 1765 aaPredicted RBP22.25■■□□□ 1.15
LINC02396-204ENST00000552628 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
LINC02396-204ENST00000552628 KNDC1Q76NI1 1749 aa22.25■■□□□ 1.15
LINC02396-204ENST00000552628 GPRASP1Q5JY77 1395 aa22.24■■□□□ 1.15
LINC02396-204ENST00000552628 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
LINC02396-204ENST00000552628 NRXN1Q9ULB1 1477 aa22.22■■□□□ 1.15
LINC02396-204ENST00000552628 R3HDM1Q15032 1099 aaKnown RBP22.22■■□□□ 1.15
LINC02396-204ENST00000552628 NGDNQ8NEJ9 315 aaKnown RBP22.22■■□□□ 1.15
LINC02396-204ENST00000552628 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
LINC02396-204ENST00000552628 NWD2Q9ULI1 1742 aa22.2■■□□□ 1.14
LINC02396-204ENST00000552628 MINK1Q8N4C8 1332 aaPredicted RBP22.2■■□□□ 1.14
LINC02396-204ENST00000552628 PRDM11Q9NQV5 511 aa22.19■■□□□ 1.14
LINC02396-204ENST00000552628 KDM2AQ9Y2K7 1162 aa22.17■■□□□ 1.14
LINC02396-204ENST00000552628 EZH2Q15910 746 aaKnown RBP22.16■■□□□ 1.14
LINC02396-204ENST00000552628 STRN4Q9NRL3 753 aa22.16■■□□□ 1.14
LINC02396-204ENST00000552628 SPATA31A5Q5VU36 1347 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms