RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
CCDC59-207ENST00000552606 CERKQ8TCT0 537 aa13.19□□□□□ -0.3
CCDC59-207ENST00000552606 ABCC11Q96J66 1382 aa13.19□□□□□ -0.3
CCDC59-207ENST00000552606 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
CCDC59-207ENST00000552606 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
CCDC59-207ENST00000552606 FAM135BQ49AJ0 1406 aa13.18□□□□□ -0.3
CCDC59-207ENST00000552606 ADGRL3Q9HAR2 1447 aa13.18□□□□□ -0.3
CCDC59-207ENST00000552606 DCCP43146 1447 aa13.17□□□□□ -0.3
CCDC59-207ENST00000552606 GPRASP1Q5JY77 1395 aa13.17□□□□□ -0.3
CCDC59-207ENST00000552606 NBPF8Q3BBV2 869 aa13.16□□□□□ -0.3
CCDC59-207ENST00000552606 TMEM132EQ6IEE7 984 aa13.16□□□□□ -0.3
CCDC59-207ENST00000552606 RGPD8O14715 1765 aaPredicted RBP13.16□□□□□ -0.3
CCDC59-207ENST00000552606 ABCB7O75027 752 aa13.15□□□□□ -0.3
CCDC59-207ENST00000552606 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.31
CCDC59-207ENST00000552606 USP32Q8NFA0 1604 aa13.14□□□□□ -0.31
CCDC59-207ENST00000552606 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
CCDC59-207ENST00000552606 TOPAZ1Q8N9V7 1692 aa13.14□□□□□ -0.31
CCDC59-207ENST00000552606 PROSER2Q86WR7 435 aaPredicted RBP13.13□□□□□ -0.31
CCDC59-207ENST00000552606 TIMELESSQ9UNS1 1208 aa13.13□□□□□ -0.31
CCDC59-207ENST00000552606 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
CCDC59-207ENST00000552606 NBPF1Q3BBV0 1214 aa13.12□□□□□ -0.31
CCDC59-207ENST00000552606 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
CCDC59-207ENST00000552606 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
CCDC59-207ENST00000552606 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
CCDC59-207ENST00000552606 MSH6P52701 1360 aa13.11□□□□□ -0.31
CCDC59-207ENST00000552606 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
CCDC59-207ENST00000552606 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
CCDC59-207ENST00000552606 MST1RQ04912 1400 aa13.1□□□□□ -0.31
CCDC59-207ENST00000552606 STK26Q9P289 416 aa13.09□□□□□ -0.31
CCDC59-207ENST00000552606 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
CCDC59-207ENST00000552606 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
CCDC59-207ENST00000552606 AHDC1Q5TGY3 1603 aaPredicted RBP13.07□□□□□ -0.32
CCDC59-207ENST00000552606 TRAK1Q9UPV9 953 aa13.07□□□□□ -0.32
CCDC59-207ENST00000552606 PHLPP1O60346 1717 aa13.06□□□□□ -0.32
CCDC59-207ENST00000552606 WAPLQ7Z5K2 1190 aa13.06□□□□□ -0.32
CCDC59-207ENST00000552606 PRAM1Q96QH2 718 aa13.06□□□□□ -0.32
CCDC59-207ENST00000552606 C19orf44Q9H6X5 657 aa13.05□□□□□ -0.32
CCDC59-207ENST00000552606 COL16A1Q07092 1604 aaPredicted RBP13.05□□□□□ -0.32
CCDC59-207ENST00000552606 ATP7BP35670 1465 aa13.04□□□□□ -0.32
CCDC59-207ENST00000552606 C1orf167Q5SNV9 1468 aa13.04□□□□□ -0.32
CCDC59-207ENST00000552606 FBXO41Q8TF61 875 aa13.04□□□□□ -0.32
CCDC59-207ENST00000552606 EIF3AQ14152 1382 aaKnown RBP13.04□□□□□ -0.32
CCDC59-207ENST00000552606 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
CCDC59-207ENST00000552606 UBAP1LF5GYI3 381 aa13.03□□□□□ -0.32
CCDC59-207ENST00000552606 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
CCDC59-207ENST00000552606 CADPS2Q86UW7 1296 aa13.02□□□□□ -0.33
CCDC59-207ENST00000552606 ANKARQ7Z5J8 1434 aa13.02□□□□□ -0.33
CCDC59-207ENST00000552606 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.33
CCDC59-207ENST00000552606 AKAP12Q02952 1782 aa13.02□□□□□ -0.33
CCDC59-207ENST00000552606 TOM1O60784 492 aa13.01□□□□□ -0.33
CCDC59-207ENST00000552606 CARD11Q9BXL7 1154 aa13.01□□□□□ -0.33
CCDC59-207ENST00000552606 CENPJQ9HC77 1338 aaPredicted RBP13.01□□□□□ -0.33
CCDC59-207ENST00000552606 MYOM1P52179 1685 aa13.01□□□□□ -0.33
CCDC59-207ENST00000552606 USP47Q96K76 1375 aa13□□□□□ -0.33
CCDC59-207ENST00000552606 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC59-207ENST00000552606 POGKQ9P215 609 aa13□□□□□ -0.33
CCDC59-207ENST00000552606 SHPRHQ149N8 1683 aa12.99□□□□□ -0.33
CCDC59-207ENST00000552606 MINK1Q8N4C8 1332 aaPredicted RBP12.99□□□□□ -0.33
CCDC59-207ENST00000552606 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
CCDC59-207ENST00000552606 ATF3P18847 181 aa12.99□□□□□ -0.33
CCDC59-207ENST00000552606 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
CCDC59-207ENST00000552606 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
CCDC59-207ENST00000552606 ABCA3Q99758 1704 aa12.97□□□□□ -0.33
CCDC59-207ENST00000552606 ALS2Q96Q42 1657 aa12.97□□□□□ -0.33
CCDC59-207ENST00000552606 HIRIP3Q9BW71 556 aaPredicted RBP12.97□□□□□ -0.33
CCDC59-207ENST00000552606 SLAIN2Q9P270 581 aa12.97□□□□□ -0.33
CCDC59-207ENST00000552606 PXDNQ92626 1479 aa12.97□□□□□ -0.33
CCDC59-207ENST00000552606 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.33
CCDC59-207ENST00000552606 PRR36Q9H6K5 1346 aa12.96□□□□□ -0.33
CCDC59-207ENST00000552606 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
CCDC59-207ENST00000552606 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
CCDC59-207ENST00000552606 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
CCDC59-207ENST00000552606 PIP4K2BP78356 416 aa12.95□□□□□ -0.34
CCDC59-207ENST00000552606 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
CCDC59-207ENST00000552606 TESK2Q96S53 571 aa12.94□□□□□ -0.34
CCDC59-207ENST00000552606 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
CCDC59-207ENST00000552606 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
CCDC59-207ENST00000552606 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
CCDC59-207ENST00000552606 DISP3Q9P2K9 1392 aa12.92□□□□□ -0.34
CCDC59-207ENST00000552606 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
CCDC59-207ENST00000552606 USP54Q70EL1 1684 aa12.91□□□□□ -0.34
CCDC59-207ENST00000552606 PPIP5K1Q6PFW1 1433 aa12.9□□□□□ -0.34
CCDC59-207ENST00000552606 NUTM2FA1L443 756 aa12.9□□□□□ -0.34
CCDC59-207ENST00000552606 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
CCDC59-207ENST00000552606 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
CCDC59-207ENST00000552606 MED1Q15648 1581 aaPredicted RBP12.9□□□□□ -0.35
CCDC59-207ENST00000552606 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
CCDC59-207ENST00000552606 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
CCDC59-207ENST00000552606 HSPA1LP34931 641 aa12.89□□□□□ -0.35
CCDC59-207ENST00000552606 ATAD2Q6PL18 1390 aa12.89□□□□□ -0.35
CCDC59-207ENST00000552606 CD163L1Q9NR16 1453 aa12.89□□□□□ -0.35
CCDC59-207ENST00000552606 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
CCDC59-207ENST00000552606 SOS2Q07890 1332 aaPredicted RBP12.88□□□□□ -0.35
CCDC59-207ENST00000552606 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
CCDC59-207ENST00000552606 DDX17Q92841 729 aaKnown RBP12.87□□□□□ -0.35
CCDC59-207ENST00000552606 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
CCDC59-207ENST00000552606 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
CCDC59-207ENST00000552606 PHF8Q9UPP1 1060 aa12.87□□□□□ -0.35
CCDC59-207ENST00000552606 KIF20BQ96Q89 1820 aa12.87□□□□□ -0.35
CCDC59-207ENST00000552606 NPHP3Q7Z494 1330 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms