RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 CD46P15529 392 aa7.31□□□□□ -1.24
USP44-208ENST00000552440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.31□□□□□ -1.24
USP44-208ENST00000552440 KDM4AO75164 1064 aa7.31□□□□□ -1.24
USP44-208ENST00000552440 KRI1Q8N9T8 703 aaKnown RBP7.31□□□□□ -1.24
USP44-208ENST00000552440 PHOX2BQ99453 314 aa7.31□□□□□ -1.24
USP44-208ENST00000552440 CLCN1P35523 988 aa7.3□□□□□ -1.24
USP44-208ENST00000552440 CYP4X1Q8N118 509 aa7.3□□□□□ -1.24
USP44-208ENST00000552440 FAM160A2Q8N612 972 aaPredicted RBP7.3□□□□□ -1.24
USP44-208ENST00000552440 TNFRSF10AO00220 468 aa7.29□□□□□ -1.24
USP44-208ENST00000552440 FOXC1Q12948 553 aa7.29□□□□□ -1.24
USP44-208ENST00000552440 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
USP44-208ENST00000552440 CTC1Q2NKJ3 1217 aa7.29□□□□□ -1.24
USP44-208ENST00000552440 USB1Q9BQ65 265 aaKnown RBP7.29□□□□□ -1.24
USP44-208ENST00000552440 MMP16P51512 607 aa7.28□□□□□ -1.24
USP44-208ENST00000552440 NLRP7Q8WX94 980 aa7.28□□□□□ -1.24
USP44-208ENST00000552440 PKD2L1Q9P0L9 805 aa7.28□□□□□ -1.24
USP44-208ENST00000552440 CRIPAKQ8N1N5 446 aa7.27□□□□□ -1.25
USP44-208ENST00000552440 REPIN1Q9BWE0 567 aaKnown RBP7.27□□□□□ -1.25
USP44-208ENST00000552440 GPCPD1Q9NPB8 672 aa7.27□□□□□ -1.25
USP44-208ENST00000552440 MDM2Q00987 491 aaPredicted RBP7.26□□□□□ -1.25
USP44-208ENST00000552440 NPM2Q86SE8 214 aaKnown RBP7.26□□□□□ -1.25
USP44-208ENST00000552440 AVPP01185 164 aa7.25□□□□□ -1.25
USP44-208ENST00000552440 NUTM1Q86Y26 1132 aa7.25□□□□□ -1.25
USP44-208ENST00000552440 TOR4AQ9NXH8 423 aa7.25□□□□□ -1.25
USP44-208ENST00000552440 TTC24A2A3L6 582 aaPredicted RBP7.24□□□□□ -1.25
USP44-208ENST00000552440 WNT7AO00755 349 aa7.24□□□□□ -1.25
USP44-208ENST00000552440 RNF19BQ6ZMZ0 732 aa7.24□□□□□ -1.25
USP44-208ENST00000552440 DXOO77932 396 aaKnown RBP7.24□□□□□ -1.25
USP44-208ENST00000552440 SMCPP49901 116 aaPredicted RBP7.24□□□□□ -1.25
USP44-208ENST00000552440 BRPF1P55201 1214 aaPredicted RBP7.24□□□□□ -1.25
USP44-208ENST00000552440 SNIP1Q8TAD8 396 aaKnown RBP7.24□□□□□ -1.25
USP44-208ENST00000552440 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
USP44-208ENST00000552440 AAASQ9NRG9 546 aa7.23□□□□□ -1.25
USP44-208ENST00000552440 AXIN1O15169 862 aa7.22□□□□□ -1.25
USP44-208ENST00000552440 TRIM32Q13049 653 aa7.22□□□□□ -1.25
USP44-208ENST00000552440 SUPT5HO00267 1087 aaKnown RBP7.22□□□□□ -1.25
USP44-208ENST00000552440 HOXA2O43364 376 aa7.22□□□□□ -1.25
USP44-208ENST00000552440 WNT7BP56706 349 aa7.22□□□□□ -1.25
USP44-208ENST00000552440 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
USP44-208ENST00000552440 PRDM9Q9NQV7 894 aa7.22□□□□□ -1.25
USP44-208ENST00000552440 FAM217BQ9NTX9 383 aaPredicted RBP7.22□□□□□ -1.25
USP44-208ENST00000552440 DIXDC1Q155Q3 683 aa7.2□□□□□ -1.26
USP44-208ENST00000552440 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
USP44-208ENST00000552440 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
USP44-208ENST00000552440 JUNDP17535 347 aa7.19□□□□□ -1.26
USP44-208ENST00000552440 CCDC24Q8N4L8 307 aa7.19□□□□□ -1.26
USP44-208ENST00000552440 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
USP44-208ENST00000552440 SPDYE5A6NIY4 337 aa7.17□□□□□ -1.26
USP44-208ENST00000552440 SENP2Q9HC62 589 aa7.17□□□□□ -1.26
USP44-208ENST00000552440 ST8SIA5O15466 376 aa7.17□□□□□ -1.26
USP44-208ENST00000552440 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
USP44-208ENST00000552440 FDX1P10109 184 aa7.16□□□□□ -1.26
USP44-208ENST00000552440 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
USP44-208ENST00000552440 SSTR3P32745 418 aaPredicted RBP7.15□□□□□ -1.26
USP44-208ENST00000552440 BARGINQ6ZT62 677 aa7.15□□□□□ -1.26
USP44-208ENST00000552440 MRGPRX2Q96LB1 330 aa7.15□□□□□ -1.26
USP44-208ENST00000552440 GJA5P36382 358 aa7.15□□□□□ -1.27
USP44-208ENST00000552440 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.27
USP44-208ENST00000552440 KIFC2Q96AC6 838 aa7.15□□□□□ -1.27
USP44-208ENST00000552440 C6orf229H3BNL8 230 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 SMPD1P17405 629 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 TTLL12Q14166 644 aaPredicted RBP7.14□□□□□ -1.27
USP44-208ENST00000552440 NEUROD2Q15784 382 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 AMHR2Q16671 573 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 TREML4Q6UXN2 200 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 NUDT12Q9BQG2 462 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 SLC24A3Q9HC58 644 aa7.14□□□□□ -1.27
USP44-208ENST00000552440 MS4A1P11836 297 aa7.13□□□□□ -1.27
USP44-208ENST00000552440 POTECB2RU33 542 aa7.13□□□□□ -1.27
USP44-208ENST00000552440 ZMYND10O75800 440 aa7.13□□□□□ -1.27
USP44-208ENST00000552440 UBTFP17480 764 aaKnown RBP7.13□□□□□ -1.27
USP44-208ENST00000552440 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
USP44-208ENST00000552440 CCNYL3P0C7X3 344 aa7.12□□□□□ -1.27
USP44-208ENST00000552440 PTPRNQ16849 979 aa7.12□□□□□ -1.27
USP44-208ENST00000552440 SPIRE2Q8WWL2 714 aa7.11□□□□□ -1.27
USP44-208ENST00000552440 EHBP1Q8NDI1 1231 aa7.11□□□□□ -1.27
USP44-208ENST00000552440 HLA-CQ95604 372 aa7.11□□□□□ -1.27
USP44-208ENST00000552440 ATP13A2Q9NQ11 1180 aa7.1□□□□□ -1.27
USP44-208ENST00000552440 GMPR2Q9P2T1 348 aaKnown RBP7.1□□□□□ -1.27
USP44-208ENST00000552440 PLEKHG3A1L390 1219 aa7.09□□□□□ -1.27
USP44-208ENST00000552440 GUCA2AQ02747 115 aa7.09□□□□□ -1.27
USP44-208ENST00000552440 MTMR2Q13614 643 aa7.09□□□□□ -1.27
USP44-208ENST00000552440 EVA1BQ9NVM1 165 aa7.09□□□□□ -1.27
USP44-208ENST00000552440 WASF2Q9Y6W5 498 aa7.09□□□□□ -1.27
USP44-208ENST00000552440 J3QL48 77 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 WFS1O76024 890 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 HRCP23327 699 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 SKOR1P84550 965 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
USP44-208ENST00000552440 SYMPKQ92797 1274 aaKnown RBP7.08□□□□□ -1.28
USP44-208ENST00000552440 TRIM47Q96LD4 638 aa7.08□□□□□ -1.28
USP44-208ENST00000552440 MPNDQ8N594 471 aa7.07□□□□□ -1.28
USP44-208ENST00000552440 AK7Q96M32 723 aa7.07□□□□□ -1.28
USP44-208ENST00000552440 BEGAINQ9BUH8 593 aa7.07□□□□□ -1.28
USP44-208ENST00000552440 DACH1Q9UI36 760 aa7.07□□□□□ -1.28
USP44-208ENST00000552440 PCDHGC3Q9UN70 934 aa7.07□□□□□ -1.28
USP44-208ENST00000552440 VARSP26640 1264 aaKnown RBP7.06□□□□□ -1.28
USP44-208ENST00000552440 KCNH2Q12809 1159 aa7.06□□□□□ -1.28
USP44-208ENST00000552440 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms