RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 RRP7BPQ9NSQ0 103 aa12.77□□□□□ -0.37
TMEM106C-218ENST00000552187 SPHKAPQ2M3C7 1700 aa12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 CHGAP10645 457 aaKnown RBP12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 UNC5CLQ8IV45 518 aa12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
TMEM106C-218ENST00000552187 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
TMEM106C-218ENST00000552187 GCC2Q8IWJ2 1684 aa12.75□□□□□ -0.37
TMEM106C-218ENST00000552187 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
TMEM106C-218ENST00000552187 COL22A1Q8NFW1 1626 aaPredicted RBP12.74□□□□□ -0.37
TMEM106C-218ENST00000552187 C1QTNF8P60827 252 aa12.74□□□□□ -0.37
TMEM106C-218ENST00000552187 ORAI2Q96SN7 254 aa12.74□□□□□ -0.37
TMEM106C-218ENST00000552187 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
TMEM106C-218ENST00000552187 LAMC1P11047 1609 aa12.73□□□□□ -0.37
TMEM106C-218ENST00000552187 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
TMEM106C-218ENST00000552187 XRN1Q8IZH2 1706 aaKnown RBP12.72□□□□□ -0.37
TMEM106C-218ENST00000552187 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.72□□□□□ -0.37
TMEM106C-218ENST00000552187 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
TMEM106C-218ENST00000552187 RPRD2Q5VT52 1461 aaKnown RBP12.71□□□□□ -0.38
TMEM106C-218ENST00000552187 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
TMEM106C-218ENST00000552187 A0A0G2JS52 829 aa12.7□□□□□ -0.38
TMEM106C-218ENST00000552187 MYT1Q01538 1121 aa12.7□□□□□ -0.38
TMEM106C-218ENST00000552187 SLIT2O94813 1529 aa12.7□□□□□ -0.38
TMEM106C-218ENST00000552187 NALCNQ8IZF0 1738 aa12.69□□□□□ -0.38
TMEM106C-218ENST00000552187 CCDC9Q9Y3X0 531 aaKnown RBP12.69□□□□□ -0.38
TMEM106C-218ENST00000552187 UTRNP46939 3433 aa12.69□□□□□ -0.38
TMEM106C-218ENST00000552187 MYOM3Q5VTT5 1437 aa12.68□□□□□ -0.38
TMEM106C-218ENST00000552187 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
TMEM106C-218ENST00000552187 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
TMEM106C-218ENST00000552187 EZH2Q15910 746 aaKnown RBP12.67□□□□□ -0.38
TMEM106C-218ENST00000552187 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
TMEM106C-218ENST00000552187 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
TMEM106C-218ENST00000552187 APLP2Q06481 763 aa12.66□□□□□ -0.38
TMEM106C-218ENST00000552187 VPS72Q15906 364 aa12.66□□□□□ -0.38
TMEM106C-218ENST00000552187 METP08581 1390 aa12.66□□□□□ -0.38
TMEM106C-218ENST00000552187 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
TMEM106C-218ENST00000552187 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
TMEM106C-218ENST00000552187 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
TMEM106C-218ENST00000552187 FAM182BQ5T319 152 aa12.64□□□□□ -0.39
TMEM106C-218ENST00000552187 ABCC5O15440 1437 aa12.63□□□□□ -0.39
TMEM106C-218ENST00000552187 NRXN3Q9Y4C0 1643 aa12.63□□□□□ -0.39
TMEM106C-218ENST00000552187 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
TMEM106C-218ENST00000552187 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
TMEM106C-218ENST00000552187 PXDNQ92626 1479 aa12.63□□□□□ -0.39
TMEM106C-218ENST00000552187 FOXO3O43524 673 aa12.61□□□□□ -0.39
TMEM106C-218ENST00000552187 FAM98CQ17RN3 349 aaKnown RBP12.61□□□□□ -0.39
TMEM106C-218ENST00000552187 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
TMEM106C-218ENST00000552187 CAMKK2Q96RR4 588 aa12.61□□□□□ -0.39
TMEM106C-218ENST00000552187 CROCC2H7BZ55 1655 aa12.61□□□□□ -0.39
TMEM106C-218ENST00000552187 ADGRL2O95490 1459 aa12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 USP32Q8NFA0 1604 aa12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 KCNQ2O43526 872 aa12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 CHIC2Q9UKJ5 165 aa12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 TNS1Q9HBL0 1735 aaKnown RBP12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 PTPN23Q9H3S7 1636 aa12.59□□□□□ -0.39
TMEM106C-218ENST00000552187 ANKRD30AQ9BXX3 1397 aa12.58□□□□□ -0.4
TMEM106C-218ENST00000552187 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
TMEM106C-218ENST00000552187 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
TMEM106C-218ENST00000552187 GIGYF1O75420 1035 aaPredicted RBP12.57□□□□□ -0.4
TMEM106C-218ENST00000552187 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
TMEM106C-218ENST00000552187 DAPK1P53355 1430 aa12.56□□□□□ -0.4
TMEM106C-218ENST00000552187 TRIM37O94972 964 aa12.56□□□□□ -0.4
TMEM106C-218ENST00000552187 NBPF8Q3BBV2 869 aa12.56□□□□□ -0.4
TMEM106C-218ENST00000552187 NBPF14Q5TI25 921 aa12.56□□□□□ -0.4
TMEM106C-218ENST00000552187 ROBO2Q9HCK4 1378 aa12.56□□□□□ -0.4
TMEM106C-218ENST00000552187 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
TMEM106C-218ENST00000552187 APBA3O96018 575 aa12.55□□□□□ -0.4
TMEM106C-218ENST00000552187 PARD3Q8TEW0 1356 aa12.55□□□□□ -0.4
TMEM106C-218ENST00000552187 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
TMEM106C-218ENST00000552187 SPATA31A3Q5VYP0 1347 aa12.54□□□□□ -0.4
TMEM106C-218ENST00000552187 LRPPRCP42704 1394 aaKnown RBP12.54□□□□□ -0.4
TMEM106C-218ENST00000552187 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
TMEM106C-218ENST00000552187 ZNF326Q5BKZ1 582 aaKnown RBP12.52□□□□□ -0.41
TMEM106C-218ENST00000552187 NUTM2FA1L443 756 aa12.51□□□□□ -0.41
TMEM106C-218ENST00000552187 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-218ENST00000552187 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-218ENST00000552187 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
TMEM106C-218ENST00000552187 NUP188Q5SRE5 1749 aa12.51□□□□□ -0.41
TMEM106C-218ENST00000552187 RREB1Q92766 1687 aa12.5□□□□□ -0.41
TMEM106C-218ENST00000552187 CHD4Q14839 1912 aa12.5□□□□□ -0.41
TMEM106C-218ENST00000552187 IQGAP3Q86VI3 1631 aa12.49□□□□□ -0.41
TMEM106C-218ENST00000552187 NRKQ7Z2Y5 1582 aa12.49□□□□□ -0.41
TMEM106C-218ENST00000552187 FAM83GA6ND36 823 aa12.49□□□□□ -0.41
TMEM106C-218ENST00000552187 KANK4Q5T7N3 995 aaPredicted RBP12.49□□□□□ -0.41
TMEM106C-218ENST00000552187 E9PCH4 1651 aa12.48□□□□□ -0.41
TMEM106C-218ENST00000552187 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
TMEM106C-218ENST00000552187 FAM196AQ6ZSG2 479 aa12.48□□□□□ -0.41
TMEM106C-218ENST00000552187 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 CCDC144AA2RUR9 1427 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 CAPN15O75808 1086 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
TMEM106C-218ENST00000552187 SPATA31A5Q5VU36 1347 aa12.46□□□□□ -0.41
TMEM106C-218ENST00000552187 SPATA31A7Q8IWB4 1347 aa12.46□□□□□ -0.41
TMEM106C-218ENST00000552187 TNS3Q68CZ2 1445 aa12.45□□□□□ -0.42
TMEM106C-218ENST00000552187 NRAPQ86VF7 1730 aa12.45□□□□□ -0.42
TMEM106C-218ENST00000552187 THSD7AQ9UPZ6 1657 aa12.45□□□□□ -0.42
TMEM106C-218ENST00000552187 LMOD2Q6P5Q4 547 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms